Genome-Wide Identification and Expression Profiling Analysis of the Mitochondrial Calcium Uniporter Gene Family Under Abiotic Stresses in Medicago sativa

• Published in: Plants (Basel) 2024-11, Vol.13 (22), p.3176
• Main Authors: Li, Wanhong, Jia, Bowei, Sheng, Jiaxun, Shen, Yang, Jin, Jun, Sun, Xiaoli, Liu, Xiangping, Sun, Mingzhe
• Format: Article
• Language: English
• Subjects: Abiotic stress; Agricultural production; Alfalfa; Amino acids; Beans; Calcium; Calcium (mitochondrial); Calcium ions; Calcium signalling; Chloroplasts; Chromosomes; Climate change; Cold; Cultivars; Drought; expression analysis; Gene duplication; Genes; Genomes; Genomic analysis; Genomics; Kinases; Legumes; Liu, Timothy; Localization; Medicago sativa; Membrane proteins; Mimosaceae; Mitochondria; mitochondrial calcium uniporter; Phylogenetics; Phylogeny; Physiology; Plant growth; Plant species; Protein transport; Proteins; Salinity; Sorghum; Soybeans; Stresses; Transmembrane domains
• ISSN: 2223-7747; 2223-7747
• DOI: 10.3390/plants13223176

The mitochondrial calcium uniporters (MCUs) are a family of calcium unidirectional transporters important for cytoplasmic Ca signals. Though the MCU proteins in several plant species have been investigated, genome-wide analysis of in alfalfa is lacking. Here, via genome-wide analysis, a total of 5, 20, and 6 genes were identified in three different alfalfa cultivars, namely Jemalong A17, XinJiangDaYe, and Zhongmu No. 1, respectively. They were further phylogenetically classified into three subfamilies. Most genes have only one intron, and gene duplication events of genes were observed within each alfalfa accession and between different accessions. All alfalfa MCU proteins contained a highly conserved MCU domain and 10 conserved motifs, featuring two transmembrane domains and a DI/VME motif. According to the tissue expression data of Zhongmu No. 1, was the most abundant transcript with the highest expression in the leaf, and and showed higher expression levels in the stem than other tissues. We analyzed the expression profiles of five genes ( ) under salt, drought, and cold stresses via qRT-PCR assays. All five genes were induced by drought stress, except MsMCU5, whose expression was up-regulated by salt stress, while cold stress slightly altered MsMCU expression. Nine potential interacting proteins and three miRNAs targeting were predicted. These results provide detailed knowledge of alfalfa genes and suggest their potential functions in abiotic stress response.