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Intrinsic Frequencies of the Resting-State fMRI Signal: The Frequency Dependence of Functional Connectivity and the Effect of Mode Mixing
The frequency characteristics of the resting-state BOLD fMRI (rs-fMRI) signal are of increasing scientific interest, as we discover more frequency-specific biological interpretations. In this work, we use variational mode decomposition (VMD) to precisely decompose the rs-fMRI time series into its in...
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Published in: | Frontiers in neuroscience 2019-09, Vol.13, p.900-900 |
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description | The frequency characteristics of the resting-state BOLD fMRI (rs-fMRI) signal are of increasing scientific interest, as we discover more frequency-specific biological interpretations. In this work, we use variational mode decomposition (VMD) to precisely decompose the rs-fMRI time series into its intrinsic mode functions (IMFs) in a data-driven manner. The accuracy of the VMD decomposition of constituent IMFs is verified through simulations, with higher reconstruction accuracy and much-reduced mode mixing relative to previous methods. Furthermore, we examine the relative contribution of the VMD-derived modes (frequencies) to the rs-fMRI signal as well as functional connectivity measurements. Our primary findings are: (1) The rs-fMRI signal within the 0.01-0.25 Hz range can be consistently characterized by 4 intrinsic frequency clusters, centred at 0.028 Hz (IMF4), 0.080 Hz (IMF3), 0.15 Hz (IMF2) and 0.22 Hz (IMF1); (2) these frequency clusters were highly reproducible, and independent of rs-fMRI data sampling rate; (3) not all frequencies were associated with equivalent network topology, in contrast to previous findings. In fact, while IMF4 is most likely associated with physiological fluctuations due to respiration and pulse, IMF3 is most likely associated with metabolic processes, and IMF2 with vasomotor activity. Both IMF3 and IMF4 could produce the brain-network topology typically observed in fMRI, whereas IMF1 and IMF2 could not. These findings provide initial evidence of feasibility in decomposing the rs-fMRI signal into its intrinsic oscillatory frequencies in a reproducible manner. |
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Our primary findings are: (1) The rs-fMRI signal within the 0.01-0.25 Hz range can be consistently characterized by 4 intrinsic frequency clusters, centred at 0.028 Hz (IMF4), 0.080 Hz (IMF3), 0.15 Hz (IMF2) and 0.22 Hz (IMF1); (2) these frequency clusters were highly reproducible, and independent of rs-fMRI data sampling rate; (3) not all frequencies were associated with equivalent network topology, in contrast to previous findings. In fact, while IMF4 is most likely associated with physiological fluctuations due to respiration and pulse, IMF3 is most likely associated with metabolic processes, and IMF2 with vasomotor activity. Both IMF3 and IMF4 could produce the brain-network topology typically observed in fMRI, whereas IMF1 and IMF2 could not. These findings provide initial evidence of feasibility in decomposing the rs-fMRI signal into its intrinsic oscillatory frequencies in a reproducible manner.</description><identifier>ISSN: 1662-453X</identifier><identifier>ISSN: 1662-4548</identifier><identifier>EISSN: 1662-453X</identifier><identifier>DOI: 10.3389/fnins.2019.00900</identifier><identifier>PMID: 31551676</identifier><language>eng</language><publisher>Lausanne: Frontiers Research Foundation</publisher><subject>Brain mapping ; Decomposition ; empirical mode decomposed ; Frequency dependence ; frequency dependence characteristics ; Functional magnetic resonance imaging ; Hypotheses ; intrinsic mode function ; Methods ; Network topologies ; Neural networks ; Neuroscience ; NMR ; Noise ; Nuclear magnetic resonance ; Physiology ; resting state functional connectivity ; resting-state fMRI ; variational modal decomposition</subject><ispartof>Frontiers in neuroscience, 2019-09, Vol.13, p.900-900</ispartof><rights>2019. 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Jean</creatorcontrib><title>Intrinsic Frequencies of the Resting-State fMRI Signal: The Frequency Dependence of Functional Connectivity and the Effect of Mode Mixing</title><title>Frontiers in neuroscience</title><description>The frequency characteristics of the resting-state BOLD fMRI (rs-fMRI) signal are of increasing scientific interest, as we discover more frequency-specific biological interpretations. In this work, we use variational mode decomposition (VMD) to precisely decompose the rs-fMRI time series into its intrinsic mode functions (IMFs) in a data-driven manner. The accuracy of the VMD decomposition of constituent IMFs is verified through simulations, with higher reconstruction accuracy and much-reduced mode mixing relative to previous methods. Furthermore, we examine the relative contribution of the VMD-derived modes (frequencies) to the rs-fMRI signal as well as functional connectivity measurements. 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These findings provide initial evidence of feasibility in decomposing the rs-fMRI signal into its intrinsic oscillatory frequencies in a reproducible manner.</description><subject>Brain mapping</subject><subject>Decomposition</subject><subject>empirical mode decomposed</subject><subject>Frequency dependence</subject><subject>frequency dependence characteristics</subject><subject>Functional magnetic resonance imaging</subject><subject>Hypotheses</subject><subject>intrinsic mode function</subject><subject>Methods</subject><subject>Network topologies</subject><subject>Neural networks</subject><subject>Neuroscience</subject><subject>NMR</subject><subject>Noise</subject><subject>Nuclear magnetic resonance</subject><subject>Physiology</subject><subject>resting state functional connectivity</subject><subject>resting-state fMRI</subject><subject>variational modal decomposition</subject><issn>1662-453X</issn><issn>1662-4548</issn><issn>1662-453X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkktvEzEUhUcIREthz9ISGzYTPH7M2CyQUGggUiOktkjsLD9TRxM72E5FfgL_Gk9SEGXl63vP_WwdnaZ53cEZxoy_c8GHPEOw4zMIOYRPmvOu71FLKP7-9J_6rHmR8wbCHjGCnjdnuKO064f-vPm1DCVViNdgkeyPvQ3a2wyiA-XOgmubiw_r9qbIYoFbXS_BjV8HOb4Ht3X8Z-MAPtmdDaaWdlpd7IMuPlYdmMcQbL3c-3IAMpgj9tK52puUq2gsWPmf9ZGXzTMnx2xfPZwXzbfF5e38S3v19fNy_vGq1RTj0nLiHCeGM8epHobeEU2hg5xihxzSqleWWkyJgVA5Wl0xGKpOGaaVU9BpfNEsT1wT5Ubskt_KdBBRenFsxLQWMhWvRys0R3pgRitCIFGGMq65GSjhFGrEFKusDyfWbq-21mhbzZTjI-jjSfB3Yh3vRT9g1vEJ8PYBkGK1Mhex9VnbcZTBxn0WCPGhQxTyrkrf_CfdxH2qHk8qRvoeUzYB4UmlU8w5Wff3Mx0UU2bEMTNiyow4Zgb_BpaUtj4</recordid><startdate>20190904</startdate><enddate>20190904</enddate><creator>Yuen, Nicole H.</creator><creator>Osachoff, Nathaniel</creator><creator>Chen, J. 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Jean</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Intrinsic Frequencies of the Resting-State fMRI Signal: The Frequency Dependence of Functional Connectivity and the Effect of Mode Mixing</atitle><jtitle>Frontiers in neuroscience</jtitle><date>2019-09-04</date><risdate>2019</risdate><volume>13</volume><spage>900</spage><epage>900</epage><pages>900-900</pages><issn>1662-453X</issn><issn>1662-4548</issn><eissn>1662-453X</eissn><abstract>The frequency characteristics of the resting-state BOLD fMRI (rs-fMRI) signal are of increasing scientific interest, as we discover more frequency-specific biological interpretations. In this work, we use variational mode decomposition (VMD) to precisely decompose the rs-fMRI time series into its intrinsic mode functions (IMFs) in a data-driven manner. 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subjects | Brain mapping Decomposition empirical mode decomposed Frequency dependence frequency dependence characteristics Functional magnetic resonance imaging Hypotheses intrinsic mode function Methods Network topologies Neural networks Neuroscience NMR Noise Nuclear magnetic resonance Physiology resting state functional connectivity resting-state fMRI variational modal decomposition |
title | Intrinsic Frequencies of the Resting-State fMRI Signal: The Frequency Dependence of Functional Connectivity and the Effect of Mode Mixing |
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