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RNF43 Mutations in IPMN Cases: A Potential Prognostic Factor
An intraductal papillary mucinous neoplasm (IPMN) is a common pancreatic precursor lesion, and it often harbors mutations in KRAS, GNAS, and RNF43. To clarify the molecular profiles of IPMNs, we conducted mutation analysis of KRAS, GNAS, and RNF43 in 61 IPMN formalin-fixed, paraffin-embedded (FFPE)...
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Published in: | Gastroenterology research and practice 2020, Vol.2020 (2020), p.1-10 |
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description | An intraductal papillary mucinous neoplasm (IPMN) is a common pancreatic precursor lesion, and it often harbors mutations in KRAS, GNAS, and RNF43. To clarify the molecular profiles of IPMNs, we conducted mutation analysis of KRAS, GNAS, and RNF43 in 61 IPMN formalin-fixed, paraffin-embedded (FFPE) specimens. The mutation rates of codons 12, 13, and 61 in KRAS and codon 201 in GNAS were detected by Sanger sequencing. Next-generation sequencing was performed on RNF43, and the results were further verified by Sanger sequencing. We identified KRAS and GNAS mutations in 35 (57%) and 40 (66%) IPMN cases, respectively. GNAS mutations were significantly correlated with the morphologic subtype (P |
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To clarify the molecular profiles of IPMNs, we conducted mutation analysis of KRAS, GNAS, and RNF43 in 61 IPMN formalin-fixed, paraffin-embedded (FFPE) specimens. The mutation rates of codons 12, 13, and 61 in KRAS and codon 201 in GNAS were detected by Sanger sequencing. Next-generation sequencing was performed on RNF43, and the results were further verified by Sanger sequencing. We identified KRAS and GNAS mutations in 35 (57%) and 40 (66%) IPMN cases, respectively. GNAS mutations were significantly correlated with the morphologic subtype (P<0.001) and were more prevalent in the intestinal subtype (93%) than in the gastric (55%) and pancreatobiliary subtypes (44%) but were absent in the oncocytic subtype. RNF43 mutations were found in 5 cases (8%), all of which occurred in high-grade dysplasia and invasive lesions (2/5 and 3/5). All 5 cases harboring RNF43 mutations also exhibited GNAS mutations. RNF43 mutations were associated with a worse prognosis in invasive IPMN patients (P=0.002), while KRAS and GNAS mutations did not affect the prognosis of patients.</description><identifier>ISSN: 1687-6121</identifier><identifier>EISSN: 1687-630X</identifier><identifier>DOI: 10.1155/2020/1457452</identifier><identifier>PMID: 32934653</identifier><language>eng</language><publisher>Cairo, Egypt: Hindawi Publishing Corporation</publisher><subject>Cancer ; Classification ; Deoxyribonucleic acid ; DNA ; Medical prognosis ; Morphology ; Mutation ; Proteins ; Survival analysis ; Tumors</subject><ispartof>Gastroenterology research and practice, 2020, Vol.2020 (2020), p.1-10</ispartof><rights>Copyright © 2020 Xiao Yan Chang et al.</rights><rights>Copyright © 2020 Xiao Yan Chang et al. This is an open access article distributed under the Creative Commons Attribution License (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. https://creativecommons.org/licenses/by/4.0</rights><rights>Copyright © 2020 Xiao Yan Chang et al. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c580t-b160caa340ab26e8c367f06878d8ed08a22bd58d16ff36c92413b8ef948ae0023</citedby><cites>FETCH-LOGICAL-c580t-b160caa340ab26e8c367f06878d8ed08a22bd58d16ff36c92413b8ef948ae0023</cites><orcidid>0000-0002-2355-0887 ; 0000-0002-2658-9525</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2442161334/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2442161334?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,4024,25753,27923,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids></links><search><contributor>Silvestris, Nicola</contributor><contributor>Nicola Silvestris</contributor><creatorcontrib>Wang, Peng Yan</creatorcontrib><creatorcontrib>Jiang, Ying</creatorcontrib><creatorcontrib>Wu, Yan</creatorcontrib><creatorcontrib>Chang, Xiao Yan</creatorcontrib><creatorcontrib>Chen, Jie</creatorcontrib><title>RNF43 Mutations in IPMN Cases: A Potential Prognostic Factor</title><title>Gastroenterology research and practice</title><description>An intraductal papillary mucinous neoplasm (IPMN) is a common pancreatic precursor lesion, and it often harbors mutations in KRAS, GNAS, and RNF43. To clarify the molecular profiles of IPMNs, we conducted mutation analysis of KRAS, GNAS, and RNF43 in 61 IPMN formalin-fixed, paraffin-embedded (FFPE) specimens. The mutation rates of codons 12, 13, and 61 in KRAS and codon 201 in GNAS were detected by Sanger sequencing. Next-generation sequencing was performed on RNF43, and the results were further verified by Sanger sequencing. We identified KRAS and GNAS mutations in 35 (57%) and 40 (66%) IPMN cases, respectively. GNAS mutations were significantly correlated with the morphologic subtype (P<0.001) and were more prevalent in the intestinal subtype (93%) than in the gastric (55%) and pancreatobiliary subtypes (44%) but were absent in the oncocytic subtype. RNF43 mutations were found in 5 cases (8%), all of which occurred in high-grade dysplasia and invasive lesions (2/5 and 3/5). All 5 cases harboring RNF43 mutations also exhibited GNAS mutations. RNF43 mutations were associated with a worse prognosis in invasive IPMN patients (P=0.002), while KRAS and GNAS mutations did not affect the prognosis of patients.</description><subject>Cancer</subject><subject>Classification</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Medical prognosis</subject><subject>Morphology</subject><subject>Mutation</subject><subject>Proteins</subject><subject>Survival analysis</subject><subject>Tumors</subject><issn>1687-6121</issn><issn>1687-630X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqFkV1rFDEUhoNYbF2981oGvBF07cnnzIoIZenWhbYuouBdOJNktllmJzWZUfz3zTirUm-8SkgeHt5zXkKeUXhDqZSnDBicUiFLIdkDckJVVc4Vh68Pf98po8fkcUo7AMUA5CNyzNmCCyX5CXn36XoleHE19Nj70KXCd8V6c3VdLDG59LY4Kzahd13vsS02MWy7kHpvihWaPsQn5KjBNrmnh3NGvqzOPy8_zC8_XqyXZ5dzIyvo5zVVYBC5AKyZcpXhqmwgZ6ts5SxUyFhtZWWpahquzIIJyuvKNQtRoQNgfEbWk9cG3Onb6PcYf-qAXv96CHGrMeZYrdPGOGBG1ZY1pRCirKml3BrqQNWM09H1fnLdDvXeWZNni9jek97_6fyN3obvuhTlYtzZjLw8CGL4NrjU671PxrUtdi4MSTMhuGSQ68joi3_QXRhil1c1UowqyrnI1OuJMjGkFF3zJwwFPVasx4r1oeKMv5rwG99Z_OH_Rz-faJcZ1-BfmiqlBOd3DWirNA</recordid><startdate>2020</startdate><enddate>2020</enddate><creator>Wang, Peng Yan</creator><creator>Jiang, Ying</creator><creator>Wu, Yan</creator><creator>Chang, Xiao Yan</creator><creator>Chen, Jie</creator><general>Hindawi Publishing Corporation</general><general>Hindawi</general><general>Hindawi Limited</general><scope>ADJCN</scope><scope>AHFXO</scope><scope>RHU</scope><scope>RHW</scope><scope>RHX</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-2355-0887</orcidid><orcidid>https://orcid.org/0000-0002-2658-9525</orcidid></search><sort><creationdate>2020</creationdate><title>RNF43 Mutations in IPMN Cases: A Potential Prognostic Factor</title><author>Wang, Peng Yan ; Jiang, Ying ; Wu, Yan ; Chang, Xiao Yan ; Chen, Jie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c580t-b160caa340ab26e8c367f06878d8ed08a22bd58d16ff36c92413b8ef948ae0023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Cancer</topic><topic>Classification</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Medical prognosis</topic><topic>Morphology</topic><topic>Mutation</topic><topic>Proteins</topic><topic>Survival analysis</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Peng Yan</creatorcontrib><creatorcontrib>Jiang, Ying</creatorcontrib><creatorcontrib>Wu, Yan</creatorcontrib><creatorcontrib>Chang, Xiao Yan</creatorcontrib><creatorcontrib>Chen, Jie</creatorcontrib><collection>الدوريات العلمية والإحصائية - e-Marefa Academic and Statistical Periodicals</collection><collection>معرفة - المحتوى العربي الأكاديمي المتكامل - e-Marefa Academic Complete</collection><collection>Hindawi Publishing Complete</collection><collection>Hindawi Publishing Subscription Journals</collection><collection>Hindawi Publishing Open Access</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>ProQuest research library</collection><collection>Research Library (Corporate)</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Directory of Open Access Journals</collection><jtitle>Gastroenterology research and practice</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Peng Yan</au><au>Jiang, Ying</au><au>Wu, Yan</au><au>Chang, Xiao Yan</au><au>Chen, Jie</au><au>Silvestris, Nicola</au><au>Nicola Silvestris</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RNF43 Mutations in IPMN Cases: A Potential Prognostic Factor</atitle><jtitle>Gastroenterology research and practice</jtitle><date>2020</date><risdate>2020</risdate><volume>2020</volume><issue>2020</issue><spage>1</spage><epage>10</epage><pages>1-10</pages><issn>1687-6121</issn><eissn>1687-630X</eissn><abstract>An intraductal papillary mucinous neoplasm (IPMN) is a common pancreatic precursor lesion, and it often harbors mutations in KRAS, GNAS, and RNF43. To clarify the molecular profiles of IPMNs, we conducted mutation analysis of KRAS, GNAS, and RNF43 in 61 IPMN formalin-fixed, paraffin-embedded (FFPE) specimens. The mutation rates of codons 12, 13, and 61 in KRAS and codon 201 in GNAS were detected by Sanger sequencing. Next-generation sequencing was performed on RNF43, and the results were further verified by Sanger sequencing. We identified KRAS and GNAS mutations in 35 (57%) and 40 (66%) IPMN cases, respectively. GNAS mutations were significantly correlated with the morphologic subtype (P<0.001) and were more prevalent in the intestinal subtype (93%) than in the gastric (55%) and pancreatobiliary subtypes (44%) but were absent in the oncocytic subtype. RNF43 mutations were found in 5 cases (8%), all of which occurred in high-grade dysplasia and invasive lesions (2/5 and 3/5). All 5 cases harboring RNF43 mutations also exhibited GNAS mutations. RNF43 mutations were associated with a worse prognosis in invasive IPMN patients (P=0.002), while KRAS and GNAS mutations did not affect the prognosis of patients.</abstract><cop>Cairo, Egypt</cop><pub>Hindawi Publishing Corporation</pub><pmid>32934653</pmid><doi>10.1155/2020/1457452</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0002-2355-0887</orcidid><orcidid>https://orcid.org/0000-0002-2658-9525</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Cancer Classification Deoxyribonucleic acid DNA Medical prognosis Morphology Mutation Proteins Survival analysis Tumors |
title | RNF43 Mutations in IPMN Cases: A Potential Prognostic Factor |
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