Transcriptome analysis of the hippocampus in environmental noise-exposed SAMP8 mice reveals regulatory pathways associated with Alzheimer's disease neuropathology

• Published in: Environmental health and preventive medicine 2020-01, Vol.25 (1), p.3-3, Article 3
• Main Authors: Su, Donghong, Li, Wenlong, Chi, Huimin, Yang, Honglian, She, Xiaojun, Wang, Kun, Gao, Xiujie, Ma, Kefeng, Zhang, Ming, Cui, Bo
• Format: Article
• Language: English
• Subjects: Aging; Alzheimer's disease; Animal cognition; Background noise; Dementia; EGR-1 protein; Egr-2 protein; Environmental hazards; Environmental health; Environmental noise; Enzyme-linked immunosorbent assay; Exposure; Gene expression; Gene sequencing; Genomes; Hippocampus; Immunoblotting; Medical research; Memory; Neural coding; Neurodegenerative diseases; Noise; Noise control; Noise levels; Ontology; Pathogenesis; Period 2 protein; Phosphorylation; Principal components analysis; Proteins; Ribonucleic acid; RNA; RNA sequencing; SAMP8 mice; Senescence; Susceptibility; Tau protein; Transcriptomes; White noise
• ISSN: 1342-078X; 1347-4715
• DOI: 10.1186/s12199-019-0840-6

Chronic noise exposure is one environmental hazard that is associated with genetic susceptibility factors that increase Alzheimer's disease (AD) pathogenesis. However, the comprehensive understanding of the link between chronic noise stress and AD is limited. Herein, we investigated the effects of chronic noise exposure on AD-like changes in senescence-accelerated mouse prone 8 (SAMP8). A total of 30 male SAMP8 mice were randomly divided into the noise-exposed group, the control group, and aging group (positive controls), and mice in the exposure group were exposed to 98 dB SPL white noise for 30 consecutive days. Transcriptome analysis and AD-like neuropathology of hippocampus were examined by RNA sequencing and immunoblotting. Enzyme-linked immunosorbent assay and real-time PCR were used to further determine the differential gene expression and explore the underlying mechanisms of chronic noise exposure in relation to AD at the genome level. Chronic noise exposure led to amyloid beta accumulation and increased the hyperphosphorylation of tau at the Ser202 and Ser404 sites in young SAMP8 mice; similar observations were noted in aging SAMP8 mice. We identified 21 protein-coding transcripts that were differentially expressed: 6 were downregulated and 15 were upregulated after chronic noise exposure; 8 genes were related to AD. qPCR results indicated that the expression of Arc, Egr1, Egr2, Fos, Nauk1, and Per2 were significantly high in the noise exposure group. These outcomes mirrored the results of the RNA sequencing data. These findings further revealed that chronic noise exposure exacerbated aging-like impairment in the hippocampus of the SAMP8 mice and that the protein-coding transcripts discovered in the study may be key candidate regulators involved in environment-gene interactions.