Plasmid Profiling and Occurrence of β-Lactamase Enzymes in Multidrug-Resistant Uropathogenic Escherichia coli in Kathmandu, Nepal

• Published in: Infection and drug resistance 2020-01, Vol.13, p.1905-1917
• Main Authors: Thapa Shrestha, Upendra, Shrestha, Sabnum, Adhikari, Nabaraj, Rijal, Komal Raj, Shrestha, Basudha, Adhikari, Bipin, Banjara, Megha Raj, Ghimire, Prakash
• Format: Article
• Language: English
• Subjects: ampc type β-lactamases; antibiotic resistance; esbl (extended spectrum β-lactamases); kpc (klebsiella pneumoniae carbapenamases); mbl (metallo-β-lactamases); Original Research; uropathogenic escherichia coli
• ISSN: 1178-6973; 1178-6973
• DOI: 10.2147/IDR.S250591

Extended-spectrum β-lactamases (ESBL) among Gram-negative bacteria, predominantly ( ), in Nepal, have been rising. The main objectives of this study were to determine the prevalence of uropathogenic , antibiotic resistance, ESBLs, ABLs (AmpC type β-lactamases), MBLs (metallo-β-lactamases) and KPCs ( carbapenemases) and their correlation with plasmid profiling patterns among patients with urinary tract infections in a tertiary hospital in Kathmandu, Nepal. The mid-stream urine samples collected from patients were inoculated in cystine-lactose-electrolyte-deficient (CLED) agar plates. producing ESBLs, ABLs, MBLs/KPC were identified phenotypically using standard microbiological methods. Plasmids were extracted by alkaline lysis method from isolates and profiled using agarose gel electrophoresis. Out of the total 2661 urine samples, were isolated in 64.34% (507/788), among which 170 (33.53%) were multidrug-resistant (MDR) isolates. All MDR isolates were resistant to amoxicillin and third-generation cephalosporins but were highly sensitive to imipenem (94.12%, 160/170), amikacin (92.94%, 158/170) and nitrofurantoin (86.47%, 147/170). Among 170 MDR isolates, 78.2% (133/170) were ESBLs, 46.3% (50/170) were AmpC, 11.2% (19/170) were MBL and 0.6% (1/170) were KPC producers. Coproduction of β-lactamases was detected in 24.12% (41/170) of isolates. isolates showed one plasmid (>33.5 kb), which was present in all the isolates. Overall, 44 different plasmid profile groups were identified based on molecular weight and number of plasmids. β-Lactamase producers were relatively resistant to the higher number of antibiotics tested (≤10) than non-producers (≤8), and the number of plasmids were higher in β-lactamase producers (≤7) than those in non-producers (≤5). The higher prevalence of the ESBLs, AmpCs, KPCs and MBLs along with their coproduction in isolates highlights the importance of routine surveillance of ESBLs, AmpCs, KPCs and MBLs in microbiology laboratories using various phenotypic methods.