Loading…

Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei

Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crust...

Full description

Saved in:
Bibliographic Details
Published in:PeerJ (San Francisco, CA) CA), 2016-07, Vol.4, p.e2221-e2221, Article e2221
Main Authors: Kim, Ah Ran, Alam, Md Jobaidul, Yoon, Tae-Ho, Lee, Soo Rin, Park, Hyun, Kim, Doo-Nam, An, Doo-Hae, Lee, Jae-Bong, Lee, Chung Il, Kim, Hyun-Woo
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3
cites cdi_FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3
container_end_page e2221
container_issue
container_start_page e2221
container_title PeerJ (San Francisco, CA)
container_volume 4
creator Kim, Ah Ran
Alam, Md Jobaidul
Yoon, Tae-Ho
Lee, Soo Rin
Park, Hyun
Kim, Doo-Nam
An, Doo-Hae
Lee, Jae-Bong
Lee, Chung Il
Kim, Hyun-Woo
description Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crustacean Litopenaeus vannamei using a combination of next generation sequencing (NGS) technology and bioinformatics analysis. The full-length Liv-AdipoR (1,245 bp) encoded a protein that exhibited the canonical seven transmembrane domains (7TMs) and the inversed topology that characterize members of the progestin and adipoQ receptor (PAQR) family. Based on the obtained sequence information, only a single orthologous AdipoR gene appears to exist in arthropods, whereas two paralogs, AdipoR1 and AdipoR2, have evolved in vertebrates. Transcriptional analysis suggested that the single Liv-AdipoR gene appears to serve the functions of two mammalian AdipoRs. At 72 h after injection of 50 pmol Liv-AdipoR dsRNA (340 bp) into L. vannamei thoracic muscle and deep abdominal muscle, transcription levels of Liv-AdipoR decreased by 93% and 97%, respectively. This confirmed optimal conditions for RNAi of Liv-AdipoR. Knockdown of Liv-AdipoR resulted in significant changes in the plasma levels of ammonia, 3-methylhistine, and ornithine, but not plasma glucose, suggesting that that Liv-AdipoR is important for maintaining muscle fibers. The chronic effect of Liv-AdipoR dsRNA injection was increased mortality. Transcriptomic analysis showed that 804 contigs were upregulated and 212 contigs were downregulated by the knockdown of Liv-AdipoR in deep abdominal muscle. The significantly upregulated genes were categorized as four main functional groups: RNA-editing and transcriptional regulators, molecular chaperones, metabolic regulators, and channel proteins.
doi_str_mv 10.7717/peerj.2221
format article
fullrecord <record><control><sourceid>gale_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_e1269c35f7fe4b7ebb4ca0bfccd3e0bb</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A543355975</galeid><doaj_id>oai_doaj_org_article_e1269c35f7fe4b7ebb4ca0bfccd3e0bb</doaj_id><sourcerecordid>A543355975</sourcerecordid><originalsourceid>FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3</originalsourceid><addsrcrecordid>eNptkl2P1CAUhhujcTfr3vgDDImJMcZZoS2lvTHZbPzYZIw3ek1O4XTKSKECXaO_XmZnXWeMcAE5PLwHznmL4imjF0Iw8WZGDNuLsizZg-K0ZI1YtRXvHh7sT4rzGLc0j7ZsaFs9Lk5KUYtW0Pa0-PbJW1SLhUDUCAFUwmB-QTLeET8QcAS0mb1DlYwjARXOyQcy-slbvyE5lkYkP0aTkFjckDgGM82vydokP6MDXCK5AedgQvOkeDSAjXh-t54VX9-_-3L1cbX-_OH66nK9UlzQtOpVXZZaM1FzrVoNjGPfVBRYi6hqOnQl8A61FrQfeqE4bXjeQE-x6xrFsTorrve62sNWzvlBEH5KD0beBnzYSAjJKIsSWdl0quKDGLDuBfZ9rSDrKqUrpH2ftd7utealn1ArdCmAPRI9PnFmlBt_I-uOU97wLPDyTiD47wvGJCcTFVoLDv0SJWtzS0TDmi6jz_9Bt34JLpdKso5XLaesoX-pDeQPGDf4nFftROUlr6uK807s0l78h8pT42RU7udgcvzowouDCyOCTWP0dtk5IR6Dr_agCj7GgMN9MRiVO0vKW0vKnSUz_OywfPfoHwNWvwGHCN6W</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1953850160</pqid></control><display><type>article</type><title>Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei</title><source>NCBI_PubMed Central(免费)</source><source>Publicly Available Content Database</source><creator>Kim, Ah Ran ; Alam, Md Jobaidul ; Yoon, Tae-Ho ; Lee, Soo Rin ; Park, Hyun ; Kim, Doo-Nam ; An, Doo-Hae ; Lee, Jae-Bong ; Lee, Chung Il ; Kim, Hyun-Woo</creator><creatorcontrib>Kim, Ah Ran ; Alam, Md Jobaidul ; Yoon, Tae-Ho ; Lee, Soo Rin ; Park, Hyun ; Kim, Doo-Nam ; An, Doo-Hae ; Lee, Jae-Bong ; Lee, Chung Il ; Kim, Hyun-Woo</creatorcontrib><description>Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crustacean Litopenaeus vannamei using a combination of next generation sequencing (NGS) technology and bioinformatics analysis. The full-length Liv-AdipoR (1,245 bp) encoded a protein that exhibited the canonical seven transmembrane domains (7TMs) and the inversed topology that characterize members of the progestin and adipoQ receptor (PAQR) family. Based on the obtained sequence information, only a single orthologous AdipoR gene appears to exist in arthropods, whereas two paralogs, AdipoR1 and AdipoR2, have evolved in vertebrates. Transcriptional analysis suggested that the single Liv-AdipoR gene appears to serve the functions of two mammalian AdipoRs. At 72 h after injection of 50 pmol Liv-AdipoR dsRNA (340 bp) into L. vannamei thoracic muscle and deep abdominal muscle, transcription levels of Liv-AdipoR decreased by 93% and 97%, respectively. This confirmed optimal conditions for RNAi of Liv-AdipoR. Knockdown of Liv-AdipoR resulted in significant changes in the plasma levels of ammonia, 3-methylhistine, and ornithine, but not plasma glucose, suggesting that that Liv-AdipoR is important for maintaining muscle fibers. The chronic effect of Liv-AdipoR dsRNA injection was increased mortality. Transcriptomic analysis showed that 804 contigs were upregulated and 212 contigs were downregulated by the knockdown of Liv-AdipoR in deep abdominal muscle. The significantly upregulated genes were categorized as four main functional groups: RNA-editing and transcriptional regulators, molecular chaperones, metabolic regulators, and channel proteins.</description><identifier>ISSN: 2167-8359</identifier><identifier>EISSN: 2167-8359</identifier><identifier>DOI: 10.7717/peerj.2221</identifier><identifier>PMID: 27478708</identifier><language>eng</language><publisher>United States: PeerJ. Ltd</publisher><subject>Adiponectin ; Adiponectin receptor ; Ammonia ; Analysis ; Aquaculture, Fisheries and Fish Science ; Bioinformatics ; Chaperones ; Cloning ; Crustacea ; Crustaceans ; Decapod crustacean ; Decapoda ; Double-stranded RNA ; Enzymes ; Fisheries ; Gene expression ; Genes ; Glucose metabolism ; GPCR ; Injection ; Kinases ; Lipid metabolism ; Litopenaeus vannamei ; Marine Biology ; Metabolism ; Molecular Biology ; Musculoskeletal system ; Ornithine ; Oxidation ; Physiology ; Plasma levels ; Progestin ; Proteins ; R&amp;D ; Research &amp; development ; Ribonucleic acid ; RNA ; RNA editing ; RNA-mediated interference ; RNAi ; Rodents ; Salinity ; Skeletal muscle ; Studies ; Thorax ; Transcription ; Transcription (Genetics) ; Transmembrane domains</subject><ispartof>PeerJ (San Francisco, CA), 2016-07, Vol.4, p.e2221-e2221, Article e2221</ispartof><rights>COPYRIGHT 2016 PeerJ. Ltd.</rights><rights>2016 Kim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2016 Kim et al. 2016 Kim et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3</citedby><cites>FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1953850160/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1953850160?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27478708$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Ah Ran</creatorcontrib><creatorcontrib>Alam, Md Jobaidul</creatorcontrib><creatorcontrib>Yoon, Tae-Ho</creatorcontrib><creatorcontrib>Lee, Soo Rin</creatorcontrib><creatorcontrib>Park, Hyun</creatorcontrib><creatorcontrib>Kim, Doo-Nam</creatorcontrib><creatorcontrib>An, Doo-Hae</creatorcontrib><creatorcontrib>Lee, Jae-Bong</creatorcontrib><creatorcontrib>Lee, Chung Il</creatorcontrib><creatorcontrib>Kim, Hyun-Woo</creatorcontrib><title>Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei</title><title>PeerJ (San Francisco, CA)</title><addtitle>PeerJ</addtitle><description>Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crustacean Litopenaeus vannamei using a combination of next generation sequencing (NGS) technology and bioinformatics analysis. The full-length Liv-AdipoR (1,245 bp) encoded a protein that exhibited the canonical seven transmembrane domains (7TMs) and the inversed topology that characterize members of the progestin and adipoQ receptor (PAQR) family. Based on the obtained sequence information, only a single orthologous AdipoR gene appears to exist in arthropods, whereas two paralogs, AdipoR1 and AdipoR2, have evolved in vertebrates. Transcriptional analysis suggested that the single Liv-AdipoR gene appears to serve the functions of two mammalian AdipoRs. At 72 h after injection of 50 pmol Liv-AdipoR dsRNA (340 bp) into L. vannamei thoracic muscle and deep abdominal muscle, transcription levels of Liv-AdipoR decreased by 93% and 97%, respectively. This confirmed optimal conditions for RNAi of Liv-AdipoR. Knockdown of Liv-AdipoR resulted in significant changes in the plasma levels of ammonia, 3-methylhistine, and ornithine, but not plasma glucose, suggesting that that Liv-AdipoR is important for maintaining muscle fibers. The chronic effect of Liv-AdipoR dsRNA injection was increased mortality. Transcriptomic analysis showed that 804 contigs were upregulated and 212 contigs were downregulated by the knockdown of Liv-AdipoR in deep abdominal muscle. The significantly upregulated genes were categorized as four main functional groups: RNA-editing and transcriptional regulators, molecular chaperones, metabolic regulators, and channel proteins.</description><subject>Adiponectin</subject><subject>Adiponectin receptor</subject><subject>Ammonia</subject><subject>Analysis</subject><subject>Aquaculture, Fisheries and Fish Science</subject><subject>Bioinformatics</subject><subject>Chaperones</subject><subject>Cloning</subject><subject>Crustacea</subject><subject>Crustaceans</subject><subject>Decapod crustacean</subject><subject>Decapoda</subject><subject>Double-stranded RNA</subject><subject>Enzymes</subject><subject>Fisheries</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Glucose metabolism</subject><subject>GPCR</subject><subject>Injection</subject><subject>Kinases</subject><subject>Lipid metabolism</subject><subject>Litopenaeus vannamei</subject><subject>Marine Biology</subject><subject>Metabolism</subject><subject>Molecular Biology</subject><subject>Musculoskeletal system</subject><subject>Ornithine</subject><subject>Oxidation</subject><subject>Physiology</subject><subject>Plasma levels</subject><subject>Progestin</subject><subject>Proteins</subject><subject>R&amp;D</subject><subject>Research &amp; development</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>RNA editing</subject><subject>RNA-mediated interference</subject><subject>RNAi</subject><subject>Rodents</subject><subject>Salinity</subject><subject>Skeletal muscle</subject><subject>Studies</subject><subject>Thorax</subject><subject>Transcription</subject><subject>Transcription (Genetics)</subject><subject>Transmembrane domains</subject><issn>2167-8359</issn><issn>2167-8359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkl2P1CAUhhujcTfr3vgDDImJMcZZoS2lvTHZbPzYZIw3ek1O4XTKSKECXaO_XmZnXWeMcAE5PLwHznmL4imjF0Iw8WZGDNuLsizZg-K0ZI1YtRXvHh7sT4rzGLc0j7ZsaFs9Lk5KUYtW0Pa0-PbJW1SLhUDUCAFUwmB-QTLeET8QcAS0mb1DlYwjARXOyQcy-slbvyE5lkYkP0aTkFjckDgGM82vydokP6MDXCK5AedgQvOkeDSAjXh-t54VX9-_-3L1cbX-_OH66nK9UlzQtOpVXZZaM1FzrVoNjGPfVBRYi6hqOnQl8A61FrQfeqE4bXjeQE-x6xrFsTorrve62sNWzvlBEH5KD0beBnzYSAjJKIsSWdl0quKDGLDuBfZ9rSDrKqUrpH2ftd7utealn1ArdCmAPRI9PnFmlBt_I-uOU97wLPDyTiD47wvGJCcTFVoLDv0SJWtzS0TDmi6jz_9Bt34JLpdKso5XLaesoX-pDeQPGDf4nFftROUlr6uK807s0l78h8pT42RU7udgcvzowouDCyOCTWP0dtk5IR6Dr_agCj7GgMN9MRiVO0vKW0vKnSUz_OywfPfoHwNWvwGHCN6W</recordid><startdate>20160714</startdate><enddate>20160714</enddate><creator>Kim, Ah Ran</creator><creator>Alam, Md Jobaidul</creator><creator>Yoon, Tae-Ho</creator><creator>Lee, Soo Rin</creator><creator>Park, Hyun</creator><creator>Kim, Doo-Nam</creator><creator>An, Doo-Hae</creator><creator>Lee, Jae-Bong</creator><creator>Lee, Chung Il</creator><creator>Kim, Hyun-Woo</creator><general>PeerJ. Ltd</general><general>PeerJ, Inc</general><general>PeerJ Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20160714</creationdate><title>Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei</title><author>Kim, Ah Ran ; Alam, Md Jobaidul ; Yoon, Tae-Ho ; Lee, Soo Rin ; Park, Hyun ; Kim, Doo-Nam ; An, Doo-Hae ; Lee, Jae-Bong ; Lee, Chung Il ; Kim, Hyun-Woo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Adiponectin</topic><topic>Adiponectin receptor</topic><topic>Ammonia</topic><topic>Analysis</topic><topic>Aquaculture, Fisheries and Fish Science</topic><topic>Bioinformatics</topic><topic>Chaperones</topic><topic>Cloning</topic><topic>Crustacea</topic><topic>Crustaceans</topic><topic>Decapod crustacean</topic><topic>Decapoda</topic><topic>Double-stranded RNA</topic><topic>Enzymes</topic><topic>Fisheries</topic><topic>Gene expression</topic><topic>Genes</topic><topic>Glucose metabolism</topic><topic>GPCR</topic><topic>Injection</topic><topic>Kinases</topic><topic>Lipid metabolism</topic><topic>Litopenaeus vannamei</topic><topic>Marine Biology</topic><topic>Metabolism</topic><topic>Molecular Biology</topic><topic>Musculoskeletal system</topic><topic>Ornithine</topic><topic>Oxidation</topic><topic>Physiology</topic><topic>Plasma levels</topic><topic>Progestin</topic><topic>Proteins</topic><topic>R&amp;D</topic><topic>Research &amp; development</topic><topic>Ribonucleic acid</topic><topic>RNA</topic><topic>RNA editing</topic><topic>RNA-mediated interference</topic><topic>RNAi</topic><topic>Rodents</topic><topic>Salinity</topic><topic>Skeletal muscle</topic><topic>Studies</topic><topic>Thorax</topic><topic>Transcription</topic><topic>Transcription (Genetics)</topic><topic>Transmembrane domains</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Ah Ran</creatorcontrib><creatorcontrib>Alam, Md Jobaidul</creatorcontrib><creatorcontrib>Yoon, Tae-Ho</creatorcontrib><creatorcontrib>Lee, Soo Rin</creatorcontrib><creatorcontrib>Park, Hyun</creatorcontrib><creatorcontrib>Kim, Doo-Nam</creatorcontrib><creatorcontrib>An, Doo-Hae</creatorcontrib><creatorcontrib>Lee, Jae-Bong</creatorcontrib><creatorcontrib>Lee, Chung Il</creatorcontrib><creatorcontrib>Kim, Hyun-Woo</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Biological Science Collection</collection><collection>ProQuest Science Journals</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PeerJ (San Francisco, CA)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Ah Ran</au><au>Alam, Md Jobaidul</au><au>Yoon, Tae-Ho</au><au>Lee, Soo Rin</au><au>Park, Hyun</au><au>Kim, Doo-Nam</au><au>An, Doo-Hae</au><au>Lee, Jae-Bong</au><au>Lee, Chung Il</au><au>Kim, Hyun-Woo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei</atitle><jtitle>PeerJ (San Francisco, CA)</jtitle><addtitle>PeerJ</addtitle><date>2016-07-14</date><risdate>2016</risdate><volume>4</volume><spage>e2221</spage><epage>e2221</epage><pages>e2221-e2221</pages><artnum>e2221</artnum><issn>2167-8359</issn><eissn>2167-8359</eissn><abstract>Adiponectin (AdipoQ) and its receptors (AdipoRs) are strongly related to growth and development of skeletal muscle, as well as glucose and lipid metabolism in vertebrates. Herein we report the identification of the first full-length cDNA encoding an AdipoR homolog (Liv-AdipoR) from the decapod crustacean Litopenaeus vannamei using a combination of next generation sequencing (NGS) technology and bioinformatics analysis. The full-length Liv-AdipoR (1,245 bp) encoded a protein that exhibited the canonical seven transmembrane domains (7TMs) and the inversed topology that characterize members of the progestin and adipoQ receptor (PAQR) family. Based on the obtained sequence information, only a single orthologous AdipoR gene appears to exist in arthropods, whereas two paralogs, AdipoR1 and AdipoR2, have evolved in vertebrates. Transcriptional analysis suggested that the single Liv-AdipoR gene appears to serve the functions of two mammalian AdipoRs. At 72 h after injection of 50 pmol Liv-AdipoR dsRNA (340 bp) into L. vannamei thoracic muscle and deep abdominal muscle, transcription levels of Liv-AdipoR decreased by 93% and 97%, respectively. This confirmed optimal conditions for RNAi of Liv-AdipoR. Knockdown of Liv-AdipoR resulted in significant changes in the plasma levels of ammonia, 3-methylhistine, and ornithine, but not plasma glucose, suggesting that that Liv-AdipoR is important for maintaining muscle fibers. The chronic effect of Liv-AdipoR dsRNA injection was increased mortality. Transcriptomic analysis showed that 804 contigs were upregulated and 212 contigs were downregulated by the knockdown of Liv-AdipoR in deep abdominal muscle. The significantly upregulated genes were categorized as four main functional groups: RNA-editing and transcriptional regulators, molecular chaperones, metabolic regulators, and channel proteins.</abstract><cop>United States</cop><pub>PeerJ. Ltd</pub><pmid>27478708</pmid><doi>10.7717/peerj.2221</doi><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2167-8359
ispartof PeerJ (San Francisco, CA), 2016-07, Vol.4, p.e2221-e2221, Article e2221
issn 2167-8359
2167-8359
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_e1269c35f7fe4b7ebb4ca0bfccd3e0bb
source NCBI_PubMed Central(免费); Publicly Available Content Database
subjects Adiponectin
Adiponectin receptor
Ammonia
Analysis
Aquaculture, Fisheries and Fish Science
Bioinformatics
Chaperones
Cloning
Crustacea
Crustaceans
Decapod crustacean
Decapoda
Double-stranded RNA
Enzymes
Fisheries
Gene expression
Genes
Glucose metabolism
GPCR
Injection
Kinases
Lipid metabolism
Litopenaeus vannamei
Marine Biology
Metabolism
Molecular Biology
Musculoskeletal system
Ornithine
Oxidation
Physiology
Plasma levels
Progestin
Proteins
R&D
Research & development
Ribonucleic acid
RNA
RNA editing
RNA-mediated interference
RNAi
Rodents
Salinity
Skeletal muscle
Studies
Thorax
Transcription
Transcription (Genetics)
Transmembrane domains
title Molecular characterization of an adiponectin receptor homolog in the white leg shrimp, Litopenaeus vannamei
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-05T08%3A27%3A39IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Molecular%20characterization%20of%20an%20adiponectin%20receptor%20homolog%20in%20the%20white%20leg%20shrimp,%20Litopenaeus%20vannamei&rft.jtitle=PeerJ%20(San%20Francisco,%20CA)&rft.au=Kim,%20Ah%20Ran&rft.date=2016-07-14&rft.volume=4&rft.spage=e2221&rft.epage=e2221&rft.pages=e2221-e2221&rft.artnum=e2221&rft.issn=2167-8359&rft.eissn=2167-8359&rft_id=info:doi/10.7717/peerj.2221&rft_dat=%3Cgale_doaj_%3EA543355975%3C/gale_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c570t-bc422dd1745dc8da15eb630a18eec40f92a59edd70bfb7c5065bfbab0e996c5e3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1953850160&rft_id=info:pmid/27478708&rft_galeid=A543355975&rfr_iscdi=true