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Shallow population structure of southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872) between Indian and Atlantic Oceans inferred from mitochondrial DNA sequences
Southern bluefin tuna (Thunnus maccoyii Castelnau, 1872) is distributed across most of the southern temperate ocean and migrates extensively between 30°S and 50°S. Since T. maccoyii has been continually and heavily exploited, it is necessary to investigate the genetic diversity, population structure...
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Published in: | Mitochondrial DNA. Part B. Resources 2021-09, Vol.6 (9), p.2548-2552 |
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description | Southern bluefin tuna (Thunnus maccoyii Castelnau, 1872) is distributed across most of the southern temperate ocean and migrates extensively between 30°S and 50°S. Since T. maccoyii has been continually and heavily exploited, it is necessary to investigate the genetic diversity, population structure and demographic history of T. maccoyii for effective management and conservation. Thirty-seven gonad tissues of T. maccoyii were sampled from two locations, which were in the eastern Indian Ocean and the eastern Atlantic Ocean, by scientific observers onboard Korean T. maccoyii longline vessels in 2015. We compared 1240-bp sequences of combined mitochondrial DNA (mtDNA) from the cytochrome c oxidase subunit I (COI, 504-bp) and control region (CR, 736-bp) sequences. The pairwise fixation index (F
ST
) and maximum-likelihood tree showed that two clades (A and B) were formed regardless of locations. Clade A occurred more commonly than clade B in both localities: the occurrence ratio of clade A was 69% in the Indian Ocean, and 79% in the Atlantic Ocean, respectively. Our findings suggest that a historic differentiation event may have occurred in T. maccoyii, but recently the connectivity between the two oceans may be possible in T. maccoyii populations. |
doi_str_mv | 10.1080/23802359.2021.1959455 |
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ST
) and maximum-likelihood tree showed that two clades (A and B) were formed regardless of locations. Clade A occurred more commonly than clade B in both localities: the occurrence ratio of clade A was 69% in the Indian Ocean, and 79% in the Atlantic Ocean, respectively. Our findings suggest that a historic differentiation event may have occurred in T. maccoyii, but recently the connectivity between the two oceans may be possible in T. maccoyii populations.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2021.1959455</identifier><identifier>PMID: 34377826</identifier><language>eng</language><publisher>Abingdon: Taylor & Francis</publisher><subject>Cytochrome-c oxidase ; Genetic diversity ; Mitochondrial DNA ; Nucleotide sequence ; Oceans ; Population genetics ; Population structure ; Rapid Communication ; Southern bluefin tuna ; Thunnus maccoyii ; Tuna</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2021-09, Vol.6 (9), p.2548-2552</ispartof><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c487t-6f55e229ebf27ab6e098da63986f631b012397d910963fa73f0c22bcaa1318513</cites><orcidid>0000-0001-9960-6819</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8344249/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2569640037?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27501,27923,27924,37011,37012,44589,53790,53792,59142,59143</link.rule.ids></links><search><creatorcontrib>Ku, Jeong Eun</creatorcontrib><creatorcontrib>Kim, Jin-Koo</creatorcontrib><creatorcontrib>Kim, Doo Nam</creatorcontrib><creatorcontrib>Lee, Sung Il</creatorcontrib><title>Shallow population structure of southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872) between Indian and Atlantic Oceans inferred from mitochondrial DNA sequences</title><title>Mitochondrial DNA. Part B. Resources</title><description>Southern bluefin tuna (Thunnus maccoyii Castelnau, 1872) is distributed across most of the southern temperate ocean and migrates extensively between 30°S and 50°S. Since T. maccoyii has been continually and heavily exploited, it is necessary to investigate the genetic diversity, population structure and demographic history of T. maccoyii for effective management and conservation. Thirty-seven gonad tissues of T. maccoyii were sampled from two locations, which were in the eastern Indian Ocean and the eastern Atlantic Ocean, by scientific observers onboard Korean T. maccoyii longline vessels in 2015. We compared 1240-bp sequences of combined mitochondrial DNA (mtDNA) from the cytochrome c oxidase subunit I (COI, 504-bp) and control region (CR, 736-bp) sequences. The pairwise fixation index (F
ST
) and maximum-likelihood tree showed that two clades (A and B) were formed regardless of locations. Clade A occurred more commonly than clade B in both localities: the occurrence ratio of clade A was 69% in the Indian Ocean, and 79% in the Atlantic Ocean, respectively. Our findings suggest that a historic differentiation event may have occurred in T. maccoyii, but recently the connectivity between the two oceans may be possible in T. maccoyii populations.</description><subject>Cytochrome-c oxidase</subject><subject>Genetic diversity</subject><subject>Mitochondrial DNA</subject><subject>Nucleotide sequence</subject><subject>Oceans</subject><subject>Population genetics</subject><subject>Population structure</subject><subject>Rapid Communication</subject><subject>Southern bluefin tuna</subject><subject>Thunnus maccoyii</subject><subject>Tuna</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNp9kstuUzEQho8QiFahj4BkiU2RmuDLuXmDiMotUkUXlLU1x5fGkY8dfGmUF-I5OSEBURasPJr55xt7_FfVS4IXBPf4DWU9pqzhC4opWRDe8LppnlTnh_z8UHj6V3xWXaS0wRiTlnUd755XZ6yeop6259WPr2twLuzQNmyLg2yDRynHInOJGgWDUih5raNHgyvaWI9y8XCF7tbF-5LQCFKGvbXo8hpS1s5DuUKk7-hrNOi809qjlVcWPAKv0DI78NlKdCs1-ISsNzpGrZCJYUSjzUGug1fRgkPvvyxR0t-L9lKnF9UzAy7pi9M5q759_HB3_Xl-c_tpdb28mcu67_K8NU2jKeV6MLSDodWY9wpaxvvWtIwMmFDGO8UJ5i0z0DGDJaWDBCCM9A1hs2p15KoAG7GNdoS4FwGs-JUI8V5AnB7gtNCkVwpYY2qOa4VVL1vV9bjBNedmmIbOqrdH1rYMo1ZS-xzBPYI-rni7FvfhQfSsrmnNJ8DlCRDDtIeUxWiT1G7aoQ4lCdq0mPKOtfUkffWPdBNK9NOqDire1hizblI1R5WMIaWozZ_LECwOxhK_jSUOxhInY019745903-FOMIuRKdEhr0L0UTw0ibB_o_4CUem1MY</recordid><startdate>20210902</startdate><enddate>20210902</enddate><creator>Ku, Jeong Eun</creator><creator>Kim, Jin-Koo</creator><creator>Kim, Doo Nam</creator><creator>Lee, Sung Il</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-9960-6819</orcidid></search><sort><creationdate>20210902</creationdate><title>Shallow population structure of southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872) between Indian and Atlantic Oceans inferred from mitochondrial DNA sequences</title><author>Ku, Jeong Eun ; Kim, Jin-Koo ; Kim, Doo Nam ; Lee, Sung Il</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c487t-6f55e229ebf27ab6e098da63986f631b012397d910963fa73f0c22bcaa1318513</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Cytochrome-c oxidase</topic><topic>Genetic diversity</topic><topic>Mitochondrial DNA</topic><topic>Nucleotide sequence</topic><topic>Oceans</topic><topic>Population genetics</topic><topic>Population structure</topic><topic>Rapid Communication</topic><topic>Southern bluefin tuna</topic><topic>Thunnus maccoyii</topic><topic>Tuna</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ku, Jeong Eun</creatorcontrib><creatorcontrib>Kim, Jin-Koo</creatorcontrib><creatorcontrib>Kim, Doo Nam</creatorcontrib><creatorcontrib>Lee, Sung Il</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library (ProQuest)</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Open Access: DOAJ - Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. Part B. Resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ku, Jeong Eun</au><au>Kim, Jin-Koo</au><au>Kim, Doo Nam</au><au>Lee, Sung Il</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Shallow population structure of southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872) between Indian and Atlantic Oceans inferred from mitochondrial DNA sequences</atitle><jtitle>Mitochondrial DNA. Part B. Resources</jtitle><date>2021-09-02</date><risdate>2021</risdate><volume>6</volume><issue>9</issue><spage>2548</spage><epage>2552</epage><pages>2548-2552</pages><issn>2380-2359</issn><eissn>2380-2359</eissn><abstract>Southern bluefin tuna (Thunnus maccoyii Castelnau, 1872) is distributed across most of the southern temperate ocean and migrates extensively between 30°S and 50°S. Since T. maccoyii has been continually and heavily exploited, it is necessary to investigate the genetic diversity, population structure and demographic history of T. maccoyii for effective management and conservation. Thirty-seven gonad tissues of T. maccoyii were sampled from two locations, which were in the eastern Indian Ocean and the eastern Atlantic Ocean, by scientific observers onboard Korean T. maccoyii longline vessels in 2015. We compared 1240-bp sequences of combined mitochondrial DNA (mtDNA) from the cytochrome c oxidase subunit I (COI, 504-bp) and control region (CR, 736-bp) sequences. The pairwise fixation index (F
ST
) and maximum-likelihood tree showed that two clades (A and B) were formed regardless of locations. Clade A occurred more commonly than clade B in both localities: the occurrence ratio of clade A was 69% in the Indian Ocean, and 79% in the Atlantic Ocean, respectively. Our findings suggest that a historic differentiation event may have occurred in T. maccoyii, but recently the connectivity between the two oceans may be possible in T. maccoyii populations.</abstract><cop>Abingdon</cop><pub>Taylor & Francis</pub><pmid>34377826</pmid><doi>10.1080/23802359.2021.1959455</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0001-9960-6819</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Cytochrome-c oxidase Genetic diversity Mitochondrial DNA Nucleotide sequence Oceans Population genetics Population structure Rapid Communication Southern bluefin tuna Thunnus maccoyii Tuna |
title | Shallow population structure of southern bluefin tuna, Thunnus maccoyii (Castelnau, 1872) between Indian and Atlantic Oceans inferred from mitochondrial DNA sequences |
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