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A multiplex PCR assay for the identification of five species of the Anopheles barbirostris complex in Thailand
The Barbirostris Complex comprises six formally described species that cannot be differentiated based on morphology alone. Out of these six species, two have been reported as putative malaria vectors, An. campestris and An. wejchoochotei. Five species are present in Thailand, An. barbirostris, An. c...
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Published in: | Parasites & vectors 2019-05, Vol.12 (1), p.223-223, Article 223 |
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description | The Barbirostris Complex comprises six formally described species that cannot be differentiated based on morphology alone. Out of these six species, two have been reported as putative malaria vectors, An. campestris and An. wejchoochotei. Five species are present in Thailand, An. barbirostris, An. campestris, An. dissidens, An. saeungae and An. wejchoochotei, while An. vanderwulpi occurs in Indonesia. As these species cannot be accurately differentiated by morphological characters, there is a crucial lack of information on their bionomics and role in the transmission of malaria and filariasis agents.
For differentiating the six species, an allele-specific amplification (AS-PCR) based on the second internal transcribed spacer (ITS2) sequence was developed. From 862 mosquitoes in the Barbirostris Complex collected in 23 provinces throughout Thailand, the AS-PCR was able to identify five species and its validation was undertaken on 185 specimens.
This multiplex-PCR assay is potentially able to definitely identify all six species of the Barbirostris Complex and was validated on five species present in Thailand. |
doi_str_mv | 10.1186/s13071-019-3494-8 |
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For differentiating the six species, an allele-specific amplification (AS-PCR) based on the second internal transcribed spacer (ITS2) sequence was developed. From 862 mosquitoes in the Barbirostris Complex collected in 23 provinces throughout Thailand, the AS-PCR was able to identify five species and its validation was undertaken on 185 specimens.
This multiplex-PCR assay is potentially able to definitely identify all six species of the Barbirostris Complex and was validated on five species present in Thailand.</description><identifier>ISSN: 1756-3305</identifier><identifier>EISSN: 1756-3305</identifier><identifier>DOI: 10.1186/s13071-019-3494-8</identifier><identifier>PMID: 31088534</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Alleles ; Animals ; Anopheles ; Anopheles - classification ; Aquatic insects ; Barbirostris Complex ; Bionomics ; Deoxyribonucleic acid ; Disease transmission ; DNA ; DNA Primers ; DNA, Ribosomal Spacer - genetics ; ecology ; Female ; Filariasis ; Human diseases ; Identification ; Identification and classification ; Indonesia ; internal transcribed spacers ; ITS2 ; Life Sciences ; Malaria ; Microbiology and Parasitology ; Morphology ; Mosquito Vectors - classification ; Mosquitoes ; multiplex PCR ; Multiplex Polymerase Chain Reaction ; Multiplexing ; Nucleotide sequence ; Parasitology ; PCR ; Phylogeny ; Polymerase chain reaction ; Ribosomal DNA ; Species ; Thailand ; Vector-borne diseases ; Vectors</subject><ispartof>Parasites & vectors, 2019-05, Vol.12 (1), p.223-223, Article 223</ispartof><rights>COPYRIGHT 2019 BioMed Central Ltd.</rights><rights>2019. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>The Author(s) 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c699t-9fdf48cd1788ae40c6cfc2f582dadb6c016dd973a191d012b3ba8c3bf930c31f3</citedby><cites>FETCH-LOGICAL-c699t-9fdf48cd1788ae40c6cfc2f582dadb6c016dd973a191d012b3ba8c3bf930c31f3</cites><orcidid>0000-0002-4911-2287 ; 0000-0002-5925-7164</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6515612/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2227384400?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,25734,27905,27906,36993,36994,44571,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31088534$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.umontpellier.fr/hal-02405343$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Brosseau, Laura</creatorcontrib><creatorcontrib>Udom, Chanya</creatorcontrib><creatorcontrib>Sukkanon, Chutipong</creatorcontrib><creatorcontrib>Chareonviriyaphap, Theeraphap</creatorcontrib><creatorcontrib>Bangs, Michael J</creatorcontrib><creatorcontrib>Saeung, Atiporn</creatorcontrib><creatorcontrib>Manguin, Sylvie</creatorcontrib><title>A multiplex PCR assay for the identification of five species of the Anopheles barbirostris complex in Thailand</title><title>Parasites & vectors</title><addtitle>Parasit Vectors</addtitle><description>The Barbirostris Complex comprises six formally described species that cannot be differentiated based on morphology alone. Out of these six species, two have been reported as putative malaria vectors, An. campestris and An. wejchoochotei. Five species are present in Thailand, An. barbirostris, An. campestris, An. dissidens, An. saeungae and An. wejchoochotei, while An. vanderwulpi occurs in Indonesia. As these species cannot be accurately differentiated by morphological characters, there is a crucial lack of information on their bionomics and role in the transmission of malaria and filariasis agents.
For differentiating the six species, an allele-specific amplification (AS-PCR) based on the second internal transcribed spacer (ITS2) sequence was developed. From 862 mosquitoes in the Barbirostris Complex collected in 23 provinces throughout Thailand, the AS-PCR was able to identify five species and its validation was undertaken on 185 specimens.
This multiplex-PCR assay is potentially able to definitely identify all six species of the Barbirostris Complex and was validated on five species present in Thailand.</description><subject>Alleles</subject><subject>Animals</subject><subject>Anopheles</subject><subject>Anopheles - classification</subject><subject>Aquatic insects</subject><subject>Barbirostris Complex</subject><subject>Bionomics</subject><subject>Deoxyribonucleic acid</subject><subject>Disease transmission</subject><subject>DNA</subject><subject>DNA Primers</subject><subject>DNA, Ribosomal Spacer - genetics</subject><subject>ecology</subject><subject>Female</subject><subject>Filariasis</subject><subject>Human diseases</subject><subject>Identification</subject><subject>Identification and classification</subject><subject>Indonesia</subject><subject>internal transcribed spacers</subject><subject>ITS2</subject><subject>Life Sciences</subject><subject>Malaria</subject><subject>Microbiology and Parasitology</subject><subject>Morphology</subject><subject>Mosquito Vectors - classification</subject><subject>Mosquitoes</subject><subject>multiplex PCR</subject><subject>Multiplex Polymerase Chain Reaction</subject><subject>Multiplexing</subject><subject>Nucleotide sequence</subject><subject>Parasitology</subject><subject>PCR</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Ribosomal DNA</subject><subject>Species</subject><subject>Thailand</subject><subject>Vector-borne diseases</subject><subject>Vectors</subject><issn>1756-3305</issn><issn>1756-3305</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNkktv1DAUhSMEoqXwA9igSGxgkeJ37A3SaAR0pJFApawtx48Zj5J4sJNR--9xmqF0ukJZOL7-7knu8SmKtxBcQsjZpwQxqGEFoKgwEaTiz4pzWFNWYQzo80fvZ8WrlHYAMCAoe1mcYQg4p5icF_2i7MZ28PvW3pY_ltelSkndlS7Ectja0hvbD955rQYf-jK40vmDLdPeam_TtJ-oRR_2W9vmQqNi42NIQ_Sp1KG7l_V9ebNVvlW9eV28cKpN9s1xvSh-ff1ys7yq1t-_rZaLdaWZEEMlnHGEawNrzpUlQDPtNHKUI6NMwzSAzBhRYwUFNACiBjeKa9w4gYHG0OGLYjXrmqB2ch99p-KdDMrL-0KIG6ni4HVrpcXU1ZYbgjAhwiIujGhsrQwXggmKstbnWWs_Np01OjsSVXsienrS-63chINkFFIGJ4GPs8D2SdvVYi2nGkAE5NvAB5jZD8ePxfB7tGmQnU_attk8G8YkEaohp4LV7D9QjACi2cKMvn-C7sIY-3wDmUI15oQAkKnLmdqo7IvvXcjj6PwY23kdeut8ri8oz4MBQuG_wY4NmRns7bBRY0py9fP6lIUzq3M8UrTuwQkI5JRmOadZ5jTLKc1y-u13j51_6PgbX_wHbbnuXQ</recordid><startdate>20190514</startdate><enddate>20190514</enddate><creator>Brosseau, Laura</creator><creator>Udom, Chanya</creator><creator>Sukkanon, Chutipong</creator><creator>Chareonviriyaphap, Theeraphap</creator><creator>Bangs, Michael J</creator><creator>Saeung, Atiporn</creator><creator>Manguin, Sylvie</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><general>BMC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H95</scope><scope>K9.</scope><scope>L.G</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>1XC</scope><scope>VOOES</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-4911-2287</orcidid><orcidid>https://orcid.org/0000-0002-5925-7164</orcidid></search><sort><creationdate>20190514</creationdate><title>A multiplex PCR assay for the identification of five species of the Anopheles barbirostris complex in Thailand</title><author>Brosseau, Laura ; Udom, Chanya ; Sukkanon, Chutipong ; Chareonviriyaphap, Theeraphap ; Bangs, Michael J ; Saeung, Atiporn ; Manguin, Sylvie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c699t-9fdf48cd1788ae40c6cfc2f582dadb6c016dd973a191d012b3ba8c3bf930c31f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Alleles</topic><topic>Animals</topic><topic>Anopheles</topic><topic>Anopheles - classification</topic><topic>Aquatic insects</topic><topic>Barbirostris Complex</topic><topic>Bionomics</topic><topic>Deoxyribonucleic acid</topic><topic>Disease transmission</topic><topic>DNA</topic><topic>DNA Primers</topic><topic>DNA, Ribosomal Spacer - genetics</topic><topic>ecology</topic><topic>Female</topic><topic>Filariasis</topic><topic>Human diseases</topic><topic>Identification</topic><topic>Identification and classification</topic><topic>Indonesia</topic><topic>internal transcribed spacers</topic><topic>ITS2</topic><topic>Life Sciences</topic><topic>Malaria</topic><topic>Microbiology and Parasitology</topic><topic>Morphology</topic><topic>Mosquito Vectors - classification</topic><topic>Mosquitoes</topic><topic>multiplex PCR</topic><topic>Multiplex Polymerase Chain Reaction</topic><topic>Multiplexing</topic><topic>Nucleotide sequence</topic><topic>Parasitology</topic><topic>PCR</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Ribosomal DNA</topic><topic>Species</topic><topic>Thailand</topic><topic>Vector-borne diseases</topic><topic>Vectors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Brosseau, Laura</creatorcontrib><creatorcontrib>Udom, Chanya</creatorcontrib><creatorcontrib>Sukkanon, Chutipong</creatorcontrib><creatorcontrib>Chareonviriyaphap, Theeraphap</creatorcontrib><creatorcontrib>Bangs, Michael J</creatorcontrib><creatorcontrib>Saeung, Atiporn</creatorcontrib><creatorcontrib>Manguin, Sylvie</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Parasites & vectors</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Brosseau, Laura</au><au>Udom, Chanya</au><au>Sukkanon, Chutipong</au><au>Chareonviriyaphap, Theeraphap</au><au>Bangs, Michael J</au><au>Saeung, Atiporn</au><au>Manguin, Sylvie</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A multiplex PCR assay for the identification of five species of the Anopheles barbirostris complex in Thailand</atitle><jtitle>Parasites & vectors</jtitle><addtitle>Parasit Vectors</addtitle><date>2019-05-14</date><risdate>2019</risdate><volume>12</volume><issue>1</issue><spage>223</spage><epage>223</epage><pages>223-223</pages><artnum>223</artnum><issn>1756-3305</issn><eissn>1756-3305</eissn><abstract>The Barbirostris Complex comprises six formally described species that cannot be differentiated based on morphology alone. Out of these six species, two have been reported as putative malaria vectors, An. campestris and An. wejchoochotei. Five species are present in Thailand, An. barbirostris, An. campestris, An. dissidens, An. saeungae and An. wejchoochotei, while An. vanderwulpi occurs in Indonesia. As these species cannot be accurately differentiated by morphological characters, there is a crucial lack of information on their bionomics and role in the transmission of malaria and filariasis agents.
For differentiating the six species, an allele-specific amplification (AS-PCR) based on the second internal transcribed spacer (ITS2) sequence was developed. From 862 mosquitoes in the Barbirostris Complex collected in 23 provinces throughout Thailand, the AS-PCR was able to identify five species and its validation was undertaken on 185 specimens.
This multiplex-PCR assay is potentially able to definitely identify all six species of the Barbirostris Complex and was validated on five species present in Thailand.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>31088534</pmid><doi>10.1186/s13071-019-3494-8</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-4911-2287</orcidid><orcidid>https://orcid.org/0000-0002-5925-7164</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Animals Anopheles Anopheles - classification Aquatic insects Barbirostris Complex Bionomics Deoxyribonucleic acid Disease transmission DNA DNA Primers DNA, Ribosomal Spacer - genetics ecology Female Filariasis Human diseases Identification Identification and classification Indonesia internal transcribed spacers ITS2 Life Sciences Malaria Microbiology and Parasitology Morphology Mosquito Vectors - classification Mosquitoes multiplex PCR Multiplex Polymerase Chain Reaction Multiplexing Nucleotide sequence Parasitology PCR Phylogeny Polymerase chain reaction Ribosomal DNA Species Thailand Vector-borne diseases Vectors |
title | A multiplex PCR assay for the identification of five species of the Anopheles barbirostris complex in Thailand |
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