Loading…

In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides

Dengue has become a huge global health burden. It is currently recognized as the most rapidly spreading mosquito-borne viral disease. Yet, there are currently no licensed vaccines or specific therapeutics to manage the virus, thus, scaling up vector control approaches is important in controlling thi...

Full description

Saved in:
Bibliographic Details
Published in:Biochemistry and biophysics reports 2021-12, Vol.28, p.101178-101178, Article 101178
Main Authors: Ononamadu, Chimaobi James, Abdalla, Mohnad, Ihegboro, Godwin Okwudiri, Li, Jin, Owolarafe, Tajudeen Alowonle, John, Timothy Datit, Tian, Qiang
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163
cites cdi_FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163
container_end_page 101178
container_issue
container_start_page 101178
container_title Biochemistry and biophysics reports
container_volume 28
creator Ononamadu, Chimaobi James
Abdalla, Mohnad
Ihegboro, Godwin Okwudiri
Li, Jin
Owolarafe, Tajudeen Alowonle
John, Timothy Datit
Tian, Qiang
description Dengue has become a huge global health burden. It is currently recognized as the most rapidly spreading mosquito-borne viral disease. Yet, there are currently no licensed vaccines or specific therapeutics to manage the virus, thus, scaling up vector control approaches is important in controlling this viral spread. This study aimed to identify and study in silico, potential anti-mosquito compounds targeting Juvenile hormone (JH) mediated pathways via the Mosquito Juvenile Hormone Binding Protein (MJHBP). The study was implemented using series of computational methods. The query compounds included pyrethroids and those derived from ZINC and ANPDB databases using a simple pharmacophore model in Molecular Operating Environment (MOE). Molecular docking of selected compounds’ library was implemented in MOE. The resultant high-score compounds were further validated by molecular dynamics simulation via Maestro 12.3 module and the respective Prime/Molecular Mechanics Generalized Born Surface Area (Prime/MM-GBSA) binding energies computed. The study identified compounds-pyrethroids, natural and synthetic - with high docking energy scores (ranging from 10.91–12.34 kcal/mol). On further analysis of the high-ranking (in terms of docking scores) compounds using MD simulation, the compounds - Ekeberin D4, Maesanin, Silafluofen and ZINC16919139- revealed very low binding energies (−122.99, −72.91 -104.50 and,-74.94 kcal/mol respectively), fairly stable complex and interesting interaction with JH-binding site amino acid residues on MJHBP. Further studies can explore these compounds in vitro/in vivo in the search for more efficient mosquito vector control. •Dengue is currently recognized as the most rapidly spreading mosquito-borne viral disease yet with limited options for treatment.•An in silico study to identify potential anti-vector (mosquito) compounds was conducted.•Promising compounds identified with very high binding affinity and interesting interactions with JH binding site of the target protein.
doi_str_mv 10.1016/j.bbrep.2021.101178
format article
fullrecord <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_e5643e002bb941b298e03e33bbadda5d</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S2405580821002727</els_id><doaj_id>oai_doaj_org_article_e5643e002bb941b298e03e33bbadda5d</doaj_id><sourcerecordid>2610079242</sourcerecordid><originalsourceid>FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163</originalsourceid><addsrcrecordid>eNp9UstuFDEQHCEQiUK-AAn5GA6z-DWvA0gkAhIUBAfgavnRs-nVjD2xZ1bKB_GfeHdDlFw4uVVdXdVqV1G8ZnTFKKvfbVbGRJhWnHK2Q1jTPiuOuaRVWbW0ff6oPipOU9pQSlnF24rXL4sjITvKZCOOiz9XniQc0AaCDvyMPVo9Y_BEe0fSvLg7EnoyhXnX1EOGZyzHkG4XnAPZLFvwOAC5CXEMHohB79CvyRTzBHpy9u3r5fmPt8SGcQqLd4noRGzWRqdnSKQPkWTf9QJki3FJpCS_wc4ZRZ9ygTavlV4VL3o9JDi9f0-KX58__by4LK-_f7m6-Hhd2opXcyla1tZt0wjhKNOVrHTfW951gkrhWO9oJ7RlTtgerKls1VpueisN7XgvJavFSXF10HVBb9QUcdTxTgWNag-EuFY65p0GUFDVUgCl3JhOMsO7FqgAIYzRzunKZa0PB61pMSM4m-8X9fBE9GnH441ah61qa0kbybPA2b1ADLcLpFmNmCwMg_YQlqR4zShtOr6nigPVxpBShP7BhlG1y4vaqH1e1C4v6pCXPPXm8YYPM__SkQnvDwTIN98iRJUsgrfgMOa_yUfB_xr8BX1f1hI</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2610079242</pqid></control><display><type>article</type><title>In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides</title><source>ScienceDirect</source><source>PubMed Central</source><creator>Ononamadu, Chimaobi James ; Abdalla, Mohnad ; Ihegboro, Godwin Okwudiri ; Li, Jin ; Owolarafe, Tajudeen Alowonle ; John, Timothy Datit ; Tian, Qiang</creator><creatorcontrib>Ononamadu, Chimaobi James ; Abdalla, Mohnad ; Ihegboro, Godwin Okwudiri ; Li, Jin ; Owolarafe, Tajudeen Alowonle ; John, Timothy Datit ; Tian, Qiang</creatorcontrib><description>Dengue has become a huge global health burden. It is currently recognized as the most rapidly spreading mosquito-borne viral disease. Yet, there are currently no licensed vaccines or specific therapeutics to manage the virus, thus, scaling up vector control approaches is important in controlling this viral spread. This study aimed to identify and study in silico, potential anti-mosquito compounds targeting Juvenile hormone (JH) mediated pathways via the Mosquito Juvenile Hormone Binding Protein (MJHBP). The study was implemented using series of computational methods. The query compounds included pyrethroids and those derived from ZINC and ANPDB databases using a simple pharmacophore model in Molecular Operating Environment (MOE). Molecular docking of selected compounds’ library was implemented in MOE. The resultant high-score compounds were further validated by molecular dynamics simulation via Maestro 12.3 module and the respective Prime/Molecular Mechanics Generalized Born Surface Area (Prime/MM-GBSA) binding energies computed. The study identified compounds-pyrethroids, natural and synthetic - with high docking energy scores (ranging from 10.91–12.34 kcal/mol). On further analysis of the high-ranking (in terms of docking scores) compounds using MD simulation, the compounds - Ekeberin D4, Maesanin, Silafluofen and ZINC16919139- revealed very low binding energies (−122.99, −72.91 -104.50 and,-74.94 kcal/mol respectively), fairly stable complex and interesting interaction with JH-binding site amino acid residues on MJHBP. Further studies can explore these compounds in vitro/in vivo in the search for more efficient mosquito vector control. •Dengue is currently recognized as the most rapidly spreading mosquito-borne viral disease yet with limited options for treatment.•An in silico study to identify potential anti-vector (mosquito) compounds was conducted.•Promising compounds identified with very high binding affinity and interesting interactions with JH binding site of the target protein.</description><identifier>ISSN: 2405-5808</identifier><identifier>EISSN: 2405-5808</identifier><identifier>DOI: 10.1016/j.bbrep.2021.101178</identifier><identifier>PMID: 34901473</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Aedes mosquito ; Dengue ; In silico ; Insecticide ; Juvenile hormone ; Vector control</subject><ispartof>Biochemistry and biophysics reports, 2021-12, Vol.28, p.101178-101178, Article 101178</ispartof><rights>2021</rights><rights>2021 Published by Elsevier B.V.</rights><rights>2021 Published by Elsevier B.V. 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163</citedby><cites>FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163</cites><orcidid>0000-0002-1682-5547</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8640742/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S2405580821002727$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/34901473$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ononamadu, Chimaobi James</creatorcontrib><creatorcontrib>Abdalla, Mohnad</creatorcontrib><creatorcontrib>Ihegboro, Godwin Okwudiri</creatorcontrib><creatorcontrib>Li, Jin</creatorcontrib><creatorcontrib>Owolarafe, Tajudeen Alowonle</creatorcontrib><creatorcontrib>John, Timothy Datit</creatorcontrib><creatorcontrib>Tian, Qiang</creatorcontrib><title>In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides</title><title>Biochemistry and biophysics reports</title><addtitle>Biochem Biophys Rep</addtitle><description>Dengue has become a huge global health burden. It is currently recognized as the most rapidly spreading mosquito-borne viral disease. Yet, there are currently no licensed vaccines or specific therapeutics to manage the virus, thus, scaling up vector control approaches is important in controlling this viral spread. This study aimed to identify and study in silico, potential anti-mosquito compounds targeting Juvenile hormone (JH) mediated pathways via the Mosquito Juvenile Hormone Binding Protein (MJHBP). The study was implemented using series of computational methods. The query compounds included pyrethroids and those derived from ZINC and ANPDB databases using a simple pharmacophore model in Molecular Operating Environment (MOE). Molecular docking of selected compounds’ library was implemented in MOE. The resultant high-score compounds were further validated by molecular dynamics simulation via Maestro 12.3 module and the respective Prime/Molecular Mechanics Generalized Born Surface Area (Prime/MM-GBSA) binding energies computed. The study identified compounds-pyrethroids, natural and synthetic - with high docking energy scores (ranging from 10.91–12.34 kcal/mol). On further analysis of the high-ranking (in terms of docking scores) compounds using MD simulation, the compounds - Ekeberin D4, Maesanin, Silafluofen and ZINC16919139- revealed very low binding energies (−122.99, −72.91 -104.50 and,-74.94 kcal/mol respectively), fairly stable complex and interesting interaction with JH-binding site amino acid residues on MJHBP. Further studies can explore these compounds in vitro/in vivo in the search for more efficient mosquito vector control. •Dengue is currently recognized as the most rapidly spreading mosquito-borne viral disease yet with limited options for treatment.•An in silico study to identify potential anti-vector (mosquito) compounds was conducted.•Promising compounds identified with very high binding affinity and interesting interactions with JH binding site of the target protein.</description><subject>Aedes mosquito</subject><subject>Dengue</subject><subject>In silico</subject><subject>Insecticide</subject><subject>Juvenile hormone</subject><subject>Vector control</subject><issn>2405-5808</issn><issn>2405-5808</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNp9UstuFDEQHCEQiUK-AAn5GA6z-DWvA0gkAhIUBAfgavnRs-nVjD2xZ1bKB_GfeHdDlFw4uVVdXdVqV1G8ZnTFKKvfbVbGRJhWnHK2Q1jTPiuOuaRVWbW0ff6oPipOU9pQSlnF24rXL4sjITvKZCOOiz9XniQc0AaCDvyMPVo9Y_BEe0fSvLg7EnoyhXnX1EOGZyzHkG4XnAPZLFvwOAC5CXEMHohB79CvyRTzBHpy9u3r5fmPt8SGcQqLd4noRGzWRqdnSKQPkWTf9QJki3FJpCS_wc4ZRZ9ygTavlV4VL3o9JDi9f0-KX58__by4LK-_f7m6-Hhd2opXcyla1tZt0wjhKNOVrHTfW951gkrhWO9oJ7RlTtgerKls1VpueisN7XgvJavFSXF10HVBb9QUcdTxTgWNag-EuFY65p0GUFDVUgCl3JhOMsO7FqgAIYzRzunKZa0PB61pMSM4m-8X9fBE9GnH441ah61qa0kbybPA2b1ADLcLpFmNmCwMg_YQlqR4zShtOr6nigPVxpBShP7BhlG1y4vaqH1e1C4v6pCXPPXm8YYPM__SkQnvDwTIN98iRJUsgrfgMOa_yUfB_xr8BX1f1hI</recordid><startdate>20211201</startdate><enddate>20211201</enddate><creator>Ononamadu, Chimaobi James</creator><creator>Abdalla, Mohnad</creator><creator>Ihegboro, Godwin Okwudiri</creator><creator>Li, Jin</creator><creator>Owolarafe, Tajudeen Alowonle</creator><creator>John, Timothy Datit</creator><creator>Tian, Qiang</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-1682-5547</orcidid></search><sort><creationdate>20211201</creationdate><title>In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides</title><author>Ononamadu, Chimaobi James ; Abdalla, Mohnad ; Ihegboro, Godwin Okwudiri ; Li, Jin ; Owolarafe, Tajudeen Alowonle ; John, Timothy Datit ; Tian, Qiang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Aedes mosquito</topic><topic>Dengue</topic><topic>In silico</topic><topic>Insecticide</topic><topic>Juvenile hormone</topic><topic>Vector control</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ononamadu, Chimaobi James</creatorcontrib><creatorcontrib>Abdalla, Mohnad</creatorcontrib><creatorcontrib>Ihegboro, Godwin Okwudiri</creatorcontrib><creatorcontrib>Li, Jin</creatorcontrib><creatorcontrib>Owolarafe, Tajudeen Alowonle</creatorcontrib><creatorcontrib>John, Timothy Datit</creatorcontrib><creatorcontrib>Tian, Qiang</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Biochemistry and biophysics reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ononamadu, Chimaobi James</au><au>Abdalla, Mohnad</au><au>Ihegboro, Godwin Okwudiri</au><au>Li, Jin</au><au>Owolarafe, Tajudeen Alowonle</au><au>John, Timothy Datit</au><au>Tian, Qiang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides</atitle><jtitle>Biochemistry and biophysics reports</jtitle><addtitle>Biochem Biophys Rep</addtitle><date>2021-12-01</date><risdate>2021</risdate><volume>28</volume><spage>101178</spage><epage>101178</epage><pages>101178-101178</pages><artnum>101178</artnum><issn>2405-5808</issn><eissn>2405-5808</eissn><abstract>Dengue has become a huge global health burden. It is currently recognized as the most rapidly spreading mosquito-borne viral disease. Yet, there are currently no licensed vaccines or specific therapeutics to manage the virus, thus, scaling up vector control approaches is important in controlling this viral spread. This study aimed to identify and study in silico, potential anti-mosquito compounds targeting Juvenile hormone (JH) mediated pathways via the Mosquito Juvenile Hormone Binding Protein (MJHBP). The study was implemented using series of computational methods. The query compounds included pyrethroids and those derived from ZINC and ANPDB databases using a simple pharmacophore model in Molecular Operating Environment (MOE). Molecular docking of selected compounds’ library was implemented in MOE. The resultant high-score compounds were further validated by molecular dynamics simulation via Maestro 12.3 module and the respective Prime/Molecular Mechanics Generalized Born Surface Area (Prime/MM-GBSA) binding energies computed. The study identified compounds-pyrethroids, natural and synthetic - with high docking energy scores (ranging from 10.91–12.34 kcal/mol). On further analysis of the high-ranking (in terms of docking scores) compounds using MD simulation, the compounds - Ekeberin D4, Maesanin, Silafluofen and ZINC16919139- revealed very low binding energies (−122.99, −72.91 -104.50 and,-74.94 kcal/mol respectively), fairly stable complex and interesting interaction with JH-binding site amino acid residues on MJHBP. Further studies can explore these compounds in vitro/in vivo in the search for more efficient mosquito vector control. •Dengue is currently recognized as the most rapidly spreading mosquito-borne viral disease yet with limited options for treatment.•An in silico study to identify potential anti-vector (mosquito) compounds was conducted.•Promising compounds identified with very high binding affinity and interesting interactions with JH binding site of the target protein.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>34901473</pmid><doi>10.1016/j.bbrep.2021.101178</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-1682-5547</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2405-5808
ispartof Biochemistry and biophysics reports, 2021-12, Vol.28, p.101178-101178, Article 101178
issn 2405-5808
2405-5808
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_e5643e002bb941b298e03e33bbadda5d
source ScienceDirect; PubMed Central
subjects Aedes mosquito
Dengue
In silico
Insecticide
Juvenile hormone
Vector control
title In silico identification and study of potential anti-mosquito juvenile hormone binding protein (MJHBP) compounds as candidates for dengue virus - Vector insecticides
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-03-06T06%3A58%3A22IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=In%20silico%20identification%20and%20study%20of%20potential%20anti-mosquito%20juvenile%20hormone%20binding%20protein%20(MJHBP)%20compounds%20as%20candidates%20for%20dengue%20virus%20-%20Vector%20insecticides&rft.jtitle=Biochemistry%20and%20biophysics%20reports&rft.au=Ononamadu,%20Chimaobi%20James&rft.date=2021-12-01&rft.volume=28&rft.spage=101178&rft.epage=101178&rft.pages=101178-101178&rft.artnum=101178&rft.issn=2405-5808&rft.eissn=2405-5808&rft_id=info:doi/10.1016/j.bbrep.2021.101178&rft_dat=%3Cproquest_doaj_%3E2610079242%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c525t-3818687733d01a545affc2993043d1fd093ac1d3cfecb5c58c2bfc4b092f44163%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2610079242&rft_id=info:pmid/34901473&rfr_iscdi=true