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A flow cytometry-based workflow for detection and quantification of anti-plasmodial antibodies in vaccinated and naturally exposed individuals
Antibodies play a central role in naturally acquired immunity against Plasmodium falciparum. Current assays to detect anti-plasmodial antibodies against native antigens within their cellular context are prone to bias and cannot be automated, although they provide important information about natural...
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Published in: | Malaria journal 2012-11, Vol.11 (1), p.367-367, Article 367 |
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description | Antibodies play a central role in naturally acquired immunity against Plasmodium falciparum. Current assays to detect anti-plasmodial antibodies against native antigens within their cellular context are prone to bias and cannot be automated, although they provide important information about natural exposure and vaccine immunogenicity. A novel, cytometry-based workflow for quantitative detection of anti-plasmodial antibodies in human serum is presented.
Fixed red blood cells (RBCs), infected with late stages of P. falciparum were utilized to detect malaria-specific antibodies by flow cytometry with subsequent automated data analysis. Available methods for data-driven analysis of cytometry data were assessed and a new overlap subtraction algorithm (OSA) based on open source software was developed. The complete workflow was evaluated using sera from two GMZ2 malaria vaccine trials in semi-immune adults and pre-school children residing in a malaria endemic area.
Fixation, permeabilization, and staining of infected RBCs were adapted for best operation in flow cytometry. As asexual blood-stage vaccine candidates are designed to induce antibody patterns similar to those in semi-immune adults, serial dilutions of sera from heavily exposed individuals were compared to naïve controls to determine optimal antibody dilutions. To eliminate investigator effects introduced by manual gating, a non-biased algorithm (OSA) for data-driven gating was developed. OSA-derived results correlated well with those obtained by manual gating (r between 0.79 and 0.99) and outperformed other model-driven gating methods. Bland-Altman plots confirmed the agreement of manual gating and OSA-derived results. A 1.33-fold increase (p=0.003) in the number of positive cells after vaccination in a subgroup of pre-school children vaccinated with 100 μg GMZ2 was present and in vaccinated adults from the same region we measured a baseline-corrected 1.23-fold, vaccine-induced increase in mean fluorescence intensity of positive cells (p=0.03).
The current workflow advances detection and quantification of anti-plasmodial antibodies through improvement of a bias-prone, low-throughput to an unbiased, semi-automated, scalable method. In conclusion, this work presents a novel method for immunofluorescence assays in malaria research. |
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Fixed red blood cells (RBCs), infected with late stages of P. falciparum were utilized to detect malaria-specific antibodies by flow cytometry with subsequent automated data analysis. Available methods for data-driven analysis of cytometry data were assessed and a new overlap subtraction algorithm (OSA) based on open source software was developed. The complete workflow was evaluated using sera from two GMZ2 malaria vaccine trials in semi-immune adults and pre-school children residing in a malaria endemic area.
Fixation, permeabilization, and staining of infected RBCs were adapted for best operation in flow cytometry. As asexual blood-stage vaccine candidates are designed to induce antibody patterns similar to those in semi-immune adults, serial dilutions of sera from heavily exposed individuals were compared to naïve controls to determine optimal antibody dilutions. To eliminate investigator effects introduced by manual gating, a non-biased algorithm (OSA) for data-driven gating was developed. OSA-derived results correlated well with those obtained by manual gating (r between 0.79 and 0.99) and outperformed other model-driven gating methods. Bland-Altman plots confirmed the agreement of manual gating and OSA-derived results. A 1.33-fold increase (p=0.003) in the number of positive cells after vaccination in a subgroup of pre-school children vaccinated with 100 μg GMZ2 was present and in vaccinated adults from the same region we measured a baseline-corrected 1.23-fold, vaccine-induced increase in mean fluorescence intensity of positive cells (p=0.03).
The current workflow advances detection and quantification of anti-plasmodial antibodies through improvement of a bias-prone, low-throughput to an unbiased, semi-automated, scalable method. In conclusion, this work presents a novel method for immunofluorescence assays in malaria research.</description><identifier>ISSN: 1475-2875</identifier><identifier>EISSN: 1475-2875</identifier><identifier>DOI: 10.1186/1475-2875-11-367</identifier><identifier>PMID: 23130649</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Adult ; Algorithmic data analysis ; Algorithms ; Analysis ; Anti-malarial antibodies ; Antibodies ; Antibodies, Protozoan - blood ; Antigens ; Child, Preschool ; Dosage and administration ; Double-Blind Method ; Elementary school students ; Erythrocytes - immunology ; Erythrocytes - parasitology ; Flow cytometry ; Flow Cytometry - methods ; Flow Cytometry - statistics & numerical data ; Flow cytometry-based IFA ; Fluorescent Antibody Technique - methods ; Fluorescent Antibody Technique - statistics & numerical data ; Gabon ; Human serum ; Humans ; Infant ; Information management ; Malaria ; Malaria vaccine ; Malaria Vaccines - administration & dosage ; Malaria, Falciparum - immunology ; Malaria, Falciparum - prevention & control ; Methodology ; Methods ; Parasites ; Plasmodium falciparum ; Plasmodium falciparum - immunology ; Prevention ; Proteins ; Public software ; Risk factors ; Vaccination ; Vaccines ; Viral antibodies ; Viral vaccines</subject><ispartof>Malaria journal, 2012-11, Vol.11 (1), p.367-367, Article 367</ispartof><rights>COPYRIGHT 2012 BioMed Central Ltd.</rights><rights>2012 Ajua et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</rights><rights>Copyright ©2012 Ajua et al.; licensee BioMed Central Ltd. 2012 Ajua et al.; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b650t-25b673010370b6ac45be20725ad1245ea5f5833aae1bcba1fb099d86d38dc1d53</citedby><cites>FETCH-LOGICAL-b650t-25b673010370b6ac45be20725ad1245ea5f5833aae1bcba1fb099d86d38dc1d53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3545855/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1269428436?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23130649$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ajua, Anthony</creatorcontrib><creatorcontrib>Engleitner, Thomas</creatorcontrib><creatorcontrib>Esen, Meral</creatorcontrib><creatorcontrib>Theisen, Michael</creatorcontrib><creatorcontrib>Issifou, Saadou</creatorcontrib><creatorcontrib>Mordmüller, Benjamin</creatorcontrib><title>A flow cytometry-based workflow for detection and quantification of anti-plasmodial antibodies in vaccinated and naturally exposed individuals</title><title>Malaria journal</title><addtitle>Malar J</addtitle><description>Antibodies play a central role in naturally acquired immunity against Plasmodium falciparum. Current assays to detect anti-plasmodial antibodies against native antigens within their cellular context are prone to bias and cannot be automated, although they provide important information about natural exposure and vaccine immunogenicity. A novel, cytometry-based workflow for quantitative detection of anti-plasmodial antibodies in human serum is presented.
Fixed red blood cells (RBCs), infected with late stages of P. falciparum were utilized to detect malaria-specific antibodies by flow cytometry with subsequent automated data analysis. Available methods for data-driven analysis of cytometry data were assessed and a new overlap subtraction algorithm (OSA) based on open source software was developed. The complete workflow was evaluated using sera from two GMZ2 malaria vaccine trials in semi-immune adults and pre-school children residing in a malaria endemic area.
Fixation, permeabilization, and staining of infected RBCs were adapted for best operation in flow cytometry. As asexual blood-stage vaccine candidates are designed to induce antibody patterns similar to those in semi-immune adults, serial dilutions of sera from heavily exposed individuals were compared to naïve controls to determine optimal antibody dilutions. To eliminate investigator effects introduced by manual gating, a non-biased algorithm (OSA) for data-driven gating was developed. OSA-derived results correlated well with those obtained by manual gating (r between 0.79 and 0.99) and outperformed other model-driven gating methods. Bland-Altman plots confirmed the agreement of manual gating and OSA-derived results. A 1.33-fold increase (p=0.003) in the number of positive cells after vaccination in a subgroup of pre-school children vaccinated with 100 μg GMZ2 was present and in vaccinated adults from the same region we measured a baseline-corrected 1.23-fold, vaccine-induced increase in mean fluorescence intensity of positive cells (p=0.03).
The current workflow advances detection and quantification of anti-plasmodial antibodies through improvement of a bias-prone, low-throughput to an unbiased, semi-automated, scalable method. In conclusion, this work presents a novel method for immunofluorescence assays in malaria research.</description><subject>Adult</subject><subject>Algorithmic data analysis</subject><subject>Algorithms</subject><subject>Analysis</subject><subject>Anti-malarial antibodies</subject><subject>Antibodies</subject><subject>Antibodies, Protozoan - blood</subject><subject>Antigens</subject><subject>Child, Preschool</subject><subject>Dosage and administration</subject><subject>Double-Blind Method</subject><subject>Elementary school students</subject><subject>Erythrocytes - immunology</subject><subject>Erythrocytes - parasitology</subject><subject>Flow cytometry</subject><subject>Flow Cytometry - methods</subject><subject>Flow Cytometry - statistics & numerical data</subject><subject>Flow cytometry-based IFA</subject><subject>Fluorescent Antibody Technique - methods</subject><subject>Fluorescent Antibody Technique - statistics & numerical data</subject><subject>Gabon</subject><subject>Human serum</subject><subject>Humans</subject><subject>Infant</subject><subject>Information management</subject><subject>Malaria</subject><subject>Malaria vaccine</subject><subject>Malaria Vaccines - administration & dosage</subject><subject>Malaria, Falciparum - immunology</subject><subject>Malaria, Falciparum - prevention & control</subject><subject>Methodology</subject><subject>Methods</subject><subject>Parasites</subject><subject>Plasmodium falciparum</subject><subject>Plasmodium falciparum - immunology</subject><subject>Prevention</subject><subject>Proteins</subject><subject>Public software</subject><subject>Risk factors</subject><subject>Vaccination</subject><subject>Vaccines</subject><subject>Viral antibodies</subject><subject>Viral vaccines</subject><issn>1475-2875</issn><issn>1475-2875</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNU0uP0zAQjhCIXQp3TigSFy5Z_IgT54K0qnistBIXOFt-jItLYnftpEv_BL8Zp13KFi0SsmSPZ775PJ7PLoqXGF1gzJu3uG5ZRXieMK5o0z4qzo-ux_fss-JZSmuEcMtb8rQ4IxRT1NTdefHzsrR9uC31bgwDjHFXKZnAlLchft8HbIilgRH06IIvpTflzST96KzTcu8Ktpz31aaXaQjGyX6_V9mEVDpfbqXWzssxs87p2Zqi7PtdCT82YT7LeeO2zkyyT8-LJzYv8OJuXRRfP7z_svxUXX_-eLW8vK5Uw9BYEaaaliKMaItUI3XNFBDUEiYNJjUDySzjlEoJWGklsVWo6wxvDOVGY8Poorg68Jog12IT3SDjTgTpxN4R4krIODrdg4DGWMoAc4NYbQlwU2ONCdMcWJdPzFzvDlybSQ1gNPgx3--E9DTi3TexCltBWc04m4tZHgiUC_8gOI3oMIhZWzFrKzAWWfrM8uaujBhuJkijGFzS0PfSQ5iSwIQz1GXd6_-AtpTxrs0tXBSv_4KuwxR91iajmq4mvKbNH9RK5o45b0OuU8-k4pLRmtDMhTPq4gFUHgYGp4MH67L_JAEdEnQMKUWwx55gJOYP8FAXXt0X45jw-8XTX8vKArY</recordid><startdate>20121106</startdate><enddate>20121106</enddate><creator>Ajua, Anthony</creator><creator>Engleitner, Thomas</creator><creator>Esen, Meral</creator><creator>Theisen, Michael</creator><creator>Issifou, Saadou</creator><creator>Mordmüller, Benjamin</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><general>BMC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SS</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8C1</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H94</scope><scope>H95</scope><scope>H97</scope><scope>K9.</scope><scope>L.G</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20121106</creationdate><title>A flow cytometry-based workflow for detection and quantification of anti-plasmodial antibodies in vaccinated and naturally exposed individuals</title><author>Ajua, Anthony ; Engleitner, Thomas ; Esen, Meral ; Theisen, Michael ; Issifou, Saadou ; Mordmüller, Benjamin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b650t-25b673010370b6ac45be20725ad1245ea5f5833aae1bcba1fb099d86d38dc1d53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adult</topic><topic>Algorithmic data analysis</topic><topic>Algorithms</topic><topic>Analysis</topic><topic>Anti-malarial antibodies</topic><topic>Antibodies</topic><topic>Antibodies, Protozoan - blood</topic><topic>Antigens</topic><topic>Child, Preschool</topic><topic>Dosage and administration</topic><topic>Double-Blind Method</topic><topic>Elementary school students</topic><topic>Erythrocytes - immunology</topic><topic>Erythrocytes - parasitology</topic><topic>Flow cytometry</topic><topic>Flow Cytometry - methods</topic><topic>Flow Cytometry - statistics & numerical data</topic><topic>Flow cytometry-based IFA</topic><topic>Fluorescent Antibody Technique - methods</topic><topic>Fluorescent Antibody Technique - statistics & numerical data</topic><topic>Gabon</topic><topic>Human serum</topic><topic>Humans</topic><topic>Infant</topic><topic>Information management</topic><topic>Malaria</topic><topic>Malaria vaccine</topic><topic>Malaria Vaccines - administration & dosage</topic><topic>Malaria, Falciparum - immunology</topic><topic>Malaria, Falciparum - prevention & control</topic><topic>Methodology</topic><topic>Methods</topic><topic>Parasites</topic><topic>Plasmodium falciparum</topic><topic>Plasmodium falciparum - immunology</topic><topic>Prevention</topic><topic>Proteins</topic><topic>Public software</topic><topic>Risk factors</topic><topic>Vaccination</topic><topic>Vaccines</topic><topic>Viral antibodies</topic><topic>Viral vaccines</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ajua, Anthony</creatorcontrib><creatorcontrib>Engleitner, Thomas</creatorcontrib><creatorcontrib>Esen, Meral</creatorcontrib><creatorcontrib>Theisen, Michael</creatorcontrib><creatorcontrib>Issifou, Saadou</creatorcontrib><creatorcontrib>Mordmüller, Benjamin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Public Health Database</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Malaria journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ajua, Anthony</au><au>Engleitner, Thomas</au><au>Esen, Meral</au><au>Theisen, Michael</au><au>Issifou, Saadou</au><au>Mordmüller, Benjamin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A flow cytometry-based workflow for detection and quantification of anti-plasmodial antibodies in vaccinated and naturally exposed individuals</atitle><jtitle>Malaria journal</jtitle><addtitle>Malar J</addtitle><date>2012-11-06</date><risdate>2012</risdate><volume>11</volume><issue>1</issue><spage>367</spage><epage>367</epage><pages>367-367</pages><artnum>367</artnum><issn>1475-2875</issn><eissn>1475-2875</eissn><abstract>Antibodies play a central role in naturally acquired immunity against Plasmodium falciparum. Current assays to detect anti-plasmodial antibodies against native antigens within their cellular context are prone to bias and cannot be automated, although they provide important information about natural exposure and vaccine immunogenicity. A novel, cytometry-based workflow for quantitative detection of anti-plasmodial antibodies in human serum is presented.
Fixed red blood cells (RBCs), infected with late stages of P. falciparum were utilized to detect malaria-specific antibodies by flow cytometry with subsequent automated data analysis. Available methods for data-driven analysis of cytometry data were assessed and a new overlap subtraction algorithm (OSA) based on open source software was developed. The complete workflow was evaluated using sera from two GMZ2 malaria vaccine trials in semi-immune adults and pre-school children residing in a malaria endemic area.
Fixation, permeabilization, and staining of infected RBCs were adapted for best operation in flow cytometry. As asexual blood-stage vaccine candidates are designed to induce antibody patterns similar to those in semi-immune adults, serial dilutions of sera from heavily exposed individuals were compared to naïve controls to determine optimal antibody dilutions. To eliminate investigator effects introduced by manual gating, a non-biased algorithm (OSA) for data-driven gating was developed. OSA-derived results correlated well with those obtained by manual gating (r between 0.79 and 0.99) and outperformed other model-driven gating methods. Bland-Altman plots confirmed the agreement of manual gating and OSA-derived results. A 1.33-fold increase (p=0.003) in the number of positive cells after vaccination in a subgroup of pre-school children vaccinated with 100 μg GMZ2 was present and in vaccinated adults from the same region we measured a baseline-corrected 1.23-fold, vaccine-induced increase in mean fluorescence intensity of positive cells (p=0.03).
The current workflow advances detection and quantification of anti-plasmodial antibodies through improvement of a bias-prone, low-throughput to an unbiased, semi-automated, scalable method. In conclusion, this work presents a novel method for immunofluorescence assays in malaria research.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>23130649</pmid><doi>10.1186/1475-2875-11-367</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Algorithmic data analysis Algorithms Analysis Anti-malarial antibodies Antibodies Antibodies, Protozoan - blood Antigens Child, Preschool Dosage and administration Double-Blind Method Elementary school students Erythrocytes - immunology Erythrocytes - parasitology Flow cytometry Flow Cytometry - methods Flow Cytometry - statistics & numerical data Flow cytometry-based IFA Fluorescent Antibody Technique - methods Fluorescent Antibody Technique - statistics & numerical data Gabon Human serum Humans Infant Information management Malaria Malaria vaccine Malaria Vaccines - administration & dosage Malaria, Falciparum - immunology Malaria, Falciparum - prevention & control Methodology Methods Parasites Plasmodium falciparum Plasmodium falciparum - immunology Prevention Proteins Public software Risk factors Vaccination Vaccines Viral antibodies Viral vaccines |
title | A flow cytometry-based workflow for detection and quantification of anti-plasmodial antibodies in vaccinated and naturally exposed individuals |
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