Loading…
Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells
Peste des petits ruminants virus (PPRV) is a highly contagious pathogen that strongly influences the productivity of small ruminants worldwide. Acetylation is an important post-translational modification involved in regulation of multiple biological functions. However, the extent and function of ace...
Saved in:
Published in: | Virology journal 2023-10, Vol.20 (1), p.1-227, Article 227 |
---|---|
Main Authors: | , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | |
---|---|
cites | cdi_FETCH-LOGICAL-c526t-290c49d50150fd37584ab26a795cd7d4c641b23299214e41f044f71184792ee03 |
container_end_page | 227 |
container_issue | 1 |
container_start_page | 1 |
container_title | Virology journal |
container_volume | 20 |
creator | Meng, Xuelian Wang, Xiangwei Zhu, Xueliang Zhang, Rui Zhang, Zhidong Sun, Yuefeng |
description | Peste des petits ruminants virus (PPRV) is a highly contagious pathogen that strongly influences the productivity of small ruminants worldwide. Acetylation is an important post-translational modification involved in regulation of multiple biological functions. However, the extent and function of acetylation in host cells during PPRV infection remains unknown. Dimethylation-labeling-based quantitative proteomic analysis of the acetylome of PPRV-infected Vero cells was performed. In total, 1068 proteins with 2641 modification sites were detected in response to PPRV infection, of which 304 differentially acetylated proteins (DAcPs) with 410 acetylated sites were identified (fold change < 0.83 or > 1.2 and P < 0.05), including 109 up-regulated and 195 down-regulated proteins. Gene Ontology (GO) classification indicated that DAcPs were mostly located in the cytoplasm (43%) and participated in cellular and metabolic processes related to binding and catalytic activity. Functional enrichment indicated that the DAcPs were involved in the minichromosome maintenance complex, unfolded protein binding, helicase activity. Only protein processing in endoplasmic reticulum pathway was enriched. A protein-protein interaction (PPI) network of the identified proteins further indicated that a various chaperone and ribosome processes were modulated by acetylation. To the best of our knowledge, this is the first study on acetylome in PPRV-infected host cell. Our findings establish an important baseline for future study on the roles of acetylation in the host response to PPRV replication and provide novel insights for understanding the molecular pathological mechanism of PPRV infection. |
doi_str_mv | 10.1186/s12985-023-02200-1 |
format | article |
fullrecord | <record><control><sourceid>gale_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_ef7cf56f2fd949b8ac3fbadb7bffce97</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A768461970</galeid><doaj_id>oai_doaj_org_article_ef7cf56f2fd949b8ac3fbadb7bffce97</doaj_id><sourcerecordid>A768461970</sourcerecordid><originalsourceid>FETCH-LOGICAL-c526t-290c49d50150fd37584ab26a795cd7d4c641b23299214e41f044f71184792ee03</originalsourceid><addsrcrecordid>eNptkk2LFDEQhhtRcF39A54CXvTQu0k66XROsiyrDiwsfuJBCOmkMmbo7oxJenD-vZmZRW2REFJUnnpDvamqek7wBSFde5kIlR2vMW3KphjX5EF1RgRrakbp14d_xY-rJyltMG5oK-RZ9e39rKfss85-B0hPetgnn1BwSBvI-6Hkw4T8hLaQMiALqUSFTyjOo59KbUI7H-dU-8mByWDRF4gBGRiG9LR65PSQ4Nn9eV59fnPz6fpdfXv3dnV9dVsbTttcU4kNk5ZjwrGzjeAd0z1ttZDcWGGZaRnpaUOlpIQBIw4z5kTpmwlJAXBzXq1OujbojdpGP-q4V0F7dUyEuFY6Zm8GUOCEcbx11FnJZN9p07he2170zhmQomi9Pmlt534Ea2DKUQ8L0eXN5L-rddgpgnnbUMKLwst7hRh-zMU2Nfp08ENPEOakaFc65KTsgr74B92EOZZPOFKCY865-EOtdemg-BzKw-Ygqq5E27GWSHEw4eI_VFkWRm_CBM6X_KLg1aKgMBl-5rWeU1Krjx-WLD2xJoaUIrjfhhCsDhOoThOoygSq4wQq0vwC_F_N9g</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2877505557</pqid></control><display><type>article</type><title>Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells</title><source>Open Access: PubMed Central</source><source>Publicly Available Content (ProQuest)</source><source>Coronavirus Research Database</source><creator>Meng, Xuelian ; Wang, Xiangwei ; Zhu, Xueliang ; Zhang, Rui ; Zhang, Zhidong ; Sun, Yuefeng</creator><creatorcontrib>Meng, Xuelian ; Wang, Xiangwei ; Zhu, Xueliang ; Zhang, Rui ; Zhang, Zhidong ; Sun, Yuefeng</creatorcontrib><description>Peste des petits ruminants virus (PPRV) is a highly contagious pathogen that strongly influences the productivity of small ruminants worldwide. Acetylation is an important post-translational modification involved in regulation of multiple biological functions. However, the extent and function of acetylation in host cells during PPRV infection remains unknown. Dimethylation-labeling-based quantitative proteomic analysis of the acetylome of PPRV-infected Vero cells was performed. In total, 1068 proteins with 2641 modification sites were detected in response to PPRV infection, of which 304 differentially acetylated proteins (DAcPs) with 410 acetylated sites were identified (fold change < 0.83 or > 1.2 and P < 0.05), including 109 up-regulated and 195 down-regulated proteins. Gene Ontology (GO) classification indicated that DAcPs were mostly located in the cytoplasm (43%) and participated in cellular and metabolic processes related to binding and catalytic activity. Functional enrichment indicated that the DAcPs were involved in the minichromosome maintenance complex, unfolded protein binding, helicase activity. Only protein processing in endoplasmic reticulum pathway was enriched. A protein-protein interaction (PPI) network of the identified proteins further indicated that a various chaperone and ribosome processes were modulated by acetylation. To the best of our knowledge, this is the first study on acetylome in PPRV-infected host cell. Our findings establish an important baseline for future study on the roles of acetylation in the host response to PPRV replication and provide novel insights for understanding the molecular pathological mechanism of PPRV infection.</description><identifier>ISSN: 1743-422X</identifier><identifier>EISSN: 1743-422X</identifier><identifier>DOI: 10.1186/s12985-023-02200-1</identifier><language>eng</language><publisher>London: BioMed Central Ltd</publisher><subject>Acetylation ; Amino acids ; Antibodies ; Care and treatment ; Cytoplasm ; Diseases ; DNA helicase ; Endoplasmic reticulum ; Enzymes ; Ethylenediaminetetraacetic acid ; Health aspects ; Infection ; Infections ; Methylation ; Pathogenesis ; Peptides ; Peste des petits ruminants ; Peste des petits ruminants virus ; Physiological aspects ; Post-translation ; Post-translational modification ; Post-translational modification, protein-protein interaction ; Protein binding ; Protein folding ; Protein interaction ; Protein-protein interactions ; Proteins ; Proteomics ; Quantitative analysis ; Ruminants ; Vero cells ; Viral infections ; Viruses</subject><ispartof>Virology journal, 2023-10, Vol.20 (1), p.1-227, Article 227</ispartof><rights>COPYRIGHT 2023 BioMed Central Ltd.</rights><rights>2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>BioMed Central Ltd., part of Springer Nature 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c526t-290c49d50150fd37584ab26a795cd7d4c641b23299214e41f044f71184792ee03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10563215/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2877505557?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,38516,43895,44590,53791,53793</link.rule.ids></links><search><creatorcontrib>Meng, Xuelian</creatorcontrib><creatorcontrib>Wang, Xiangwei</creatorcontrib><creatorcontrib>Zhu, Xueliang</creatorcontrib><creatorcontrib>Zhang, Rui</creatorcontrib><creatorcontrib>Zhang, Zhidong</creatorcontrib><creatorcontrib>Sun, Yuefeng</creatorcontrib><title>Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells</title><title>Virology journal</title><description>Peste des petits ruminants virus (PPRV) is a highly contagious pathogen that strongly influences the productivity of small ruminants worldwide. Acetylation is an important post-translational modification involved in regulation of multiple biological functions. However, the extent and function of acetylation in host cells during PPRV infection remains unknown. Dimethylation-labeling-based quantitative proteomic analysis of the acetylome of PPRV-infected Vero cells was performed. In total, 1068 proteins with 2641 modification sites were detected in response to PPRV infection, of which 304 differentially acetylated proteins (DAcPs) with 410 acetylated sites were identified (fold change < 0.83 or > 1.2 and P < 0.05), including 109 up-regulated and 195 down-regulated proteins. Gene Ontology (GO) classification indicated that DAcPs were mostly located in the cytoplasm (43%) and participated in cellular and metabolic processes related to binding and catalytic activity. Functional enrichment indicated that the DAcPs were involved in the minichromosome maintenance complex, unfolded protein binding, helicase activity. Only protein processing in endoplasmic reticulum pathway was enriched. A protein-protein interaction (PPI) network of the identified proteins further indicated that a various chaperone and ribosome processes were modulated by acetylation. To the best of our knowledge, this is the first study on acetylome in PPRV-infected host cell. Our findings establish an important baseline for future study on the roles of acetylation in the host response to PPRV replication and provide novel insights for understanding the molecular pathological mechanism of PPRV infection.</description><subject>Acetylation</subject><subject>Amino acids</subject><subject>Antibodies</subject><subject>Care and treatment</subject><subject>Cytoplasm</subject><subject>Diseases</subject><subject>DNA helicase</subject><subject>Endoplasmic reticulum</subject><subject>Enzymes</subject><subject>Ethylenediaminetetraacetic acid</subject><subject>Health aspects</subject><subject>Infection</subject><subject>Infections</subject><subject>Methylation</subject><subject>Pathogenesis</subject><subject>Peptides</subject><subject>Peste des petits ruminants</subject><subject>Peste des petits ruminants virus</subject><subject>Physiological aspects</subject><subject>Post-translation</subject><subject>Post-translational modification</subject><subject>Post-translational modification, protein-protein interaction</subject><subject>Protein binding</subject><subject>Protein folding</subject><subject>Protein interaction</subject><subject>Protein-protein interactions</subject><subject>Proteins</subject><subject>Proteomics</subject><subject>Quantitative analysis</subject><subject>Ruminants</subject><subject>Vero cells</subject><subject>Viral infections</subject><subject>Viruses</subject><issn>1743-422X</issn><issn>1743-422X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>COVID</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkk2LFDEQhhtRcF39A54CXvTQu0k66XROsiyrDiwsfuJBCOmkMmbo7oxJenD-vZmZRW2REFJUnnpDvamqek7wBSFde5kIlR2vMW3KphjX5EF1RgRrakbp14d_xY-rJyltMG5oK-RZ9e39rKfss85-B0hPetgnn1BwSBvI-6Hkw4T8hLaQMiALqUSFTyjOo59KbUI7H-dU-8mByWDRF4gBGRiG9LR65PSQ4Nn9eV59fnPz6fpdfXv3dnV9dVsbTttcU4kNk5ZjwrGzjeAd0z1ttZDcWGGZaRnpaUOlpIQBIw4z5kTpmwlJAXBzXq1OujbojdpGP-q4V0F7dUyEuFY6Zm8GUOCEcbx11FnJZN9p07he2170zhmQomi9Pmlt534Ea2DKUQ8L0eXN5L-rddgpgnnbUMKLwst7hRh-zMU2Nfp08ENPEOakaFc65KTsgr74B92EOZZPOFKCY865-EOtdemg-BzKw-Ygqq5E27GWSHEw4eI_VFkWRm_CBM6X_KLg1aKgMBl-5rWeU1Krjx-WLD2xJoaUIrjfhhCsDhOoThOoygSq4wQq0vwC_F_N9g</recordid><startdate>20231010</startdate><enddate>20231010</enddate><creator>Meng, Xuelian</creator><creator>Wang, Xiangwei</creator><creator>Zhu, Xueliang</creator><creator>Zhang, Rui</creator><creator>Zhang, Zhidong</creator><creator>Sun, Yuefeng</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><general>BMC</general><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>H94</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20231010</creationdate><title>Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells</title><author>Meng, Xuelian ; Wang, Xiangwei ; Zhu, Xueliang ; Zhang, Rui ; Zhang, Zhidong ; Sun, Yuefeng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c526t-290c49d50150fd37584ab26a795cd7d4c641b23299214e41f044f71184792ee03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Acetylation</topic><topic>Amino acids</topic><topic>Antibodies</topic><topic>Care and treatment</topic><topic>Cytoplasm</topic><topic>Diseases</topic><topic>DNA helicase</topic><topic>Endoplasmic reticulum</topic><topic>Enzymes</topic><topic>Ethylenediaminetetraacetic acid</topic><topic>Health aspects</topic><topic>Infection</topic><topic>Infections</topic><topic>Methylation</topic><topic>Pathogenesis</topic><topic>Peptides</topic><topic>Peste des petits ruminants</topic><topic>Peste des petits ruminants virus</topic><topic>Physiological aspects</topic><topic>Post-translation</topic><topic>Post-translational modification</topic><topic>Post-translational modification, protein-protein interaction</topic><topic>Protein binding</topic><topic>Protein folding</topic><topic>Protein interaction</topic><topic>Protein-protein interactions</topic><topic>Proteins</topic><topic>Proteomics</topic><topic>Quantitative analysis</topic><topic>Ruminants</topic><topic>Vero cells</topic><topic>Viral infections</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Meng, Xuelian</creatorcontrib><creatorcontrib>Wang, Xiangwei</creatorcontrib><creatorcontrib>Zhu, Xueliang</creatorcontrib><creatorcontrib>Zhang, Rui</creatorcontrib><creatorcontrib>Zhang, Zhidong</creatorcontrib><creatorcontrib>Sun, Yuefeng</creatorcontrib><collection>CrossRef</collection><collection>Science (Gale in Context)</collection><collection>ProQuest Central (Corporate)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>Coronavirus Research Database</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Directory of Open Access Journals(OpenAccess)</collection><jtitle>Virology journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Meng, Xuelian</au><au>Wang, Xiangwei</au><au>Zhu, Xueliang</au><au>Zhang, Rui</au><au>Zhang, Zhidong</au><au>Sun, Yuefeng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells</atitle><jtitle>Virology journal</jtitle><date>2023-10-10</date><risdate>2023</risdate><volume>20</volume><issue>1</issue><spage>1</spage><epage>227</epage><pages>1-227</pages><artnum>227</artnum><issn>1743-422X</issn><eissn>1743-422X</eissn><abstract>Peste des petits ruminants virus (PPRV) is a highly contagious pathogen that strongly influences the productivity of small ruminants worldwide. Acetylation is an important post-translational modification involved in regulation of multiple biological functions. However, the extent and function of acetylation in host cells during PPRV infection remains unknown. Dimethylation-labeling-based quantitative proteomic analysis of the acetylome of PPRV-infected Vero cells was performed. In total, 1068 proteins with 2641 modification sites were detected in response to PPRV infection, of which 304 differentially acetylated proteins (DAcPs) with 410 acetylated sites were identified (fold change < 0.83 or > 1.2 and P < 0.05), including 109 up-regulated and 195 down-regulated proteins. Gene Ontology (GO) classification indicated that DAcPs were mostly located in the cytoplasm (43%) and participated in cellular and metabolic processes related to binding and catalytic activity. Functional enrichment indicated that the DAcPs were involved in the minichromosome maintenance complex, unfolded protein binding, helicase activity. Only protein processing in endoplasmic reticulum pathway was enriched. A protein-protein interaction (PPI) network of the identified proteins further indicated that a various chaperone and ribosome processes were modulated by acetylation. To the best of our knowledge, this is the first study on acetylome in PPRV-infected host cell. Our findings establish an important baseline for future study on the roles of acetylation in the host response to PPRV replication and provide novel insights for understanding the molecular pathological mechanism of PPRV infection.</abstract><cop>London</cop><pub>BioMed Central Ltd</pub><doi>10.1186/s12985-023-02200-1</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1743-422X |
ispartof | Virology journal, 2023-10, Vol.20 (1), p.1-227, Article 227 |
issn | 1743-422X 1743-422X |
language | eng |
recordid | cdi_doaj_primary_oai_doaj_org_article_ef7cf56f2fd949b8ac3fbadb7bffce97 |
source | Open Access: PubMed Central; Publicly Available Content (ProQuest); Coronavirus Research Database |
subjects | Acetylation Amino acids Antibodies Care and treatment Cytoplasm Diseases DNA helicase Endoplasmic reticulum Enzymes Ethylenediaminetetraacetic acid Health aspects Infection Infections Methylation Pathogenesis Peptides Peste des petits ruminants Peste des petits ruminants virus Physiological aspects Post-translation Post-translational modification Post-translational modification, protein-protein interaction Protein binding Protein folding Protein interaction Protein-protein interactions Proteins Proteomics Quantitative analysis Ruminants Vero cells Viral infections Viruses |
title | Quantitative analysis of acetylation in peste des petits ruminants virus-infected Vero cells |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-25T21%3A19%3A17IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Quantitative%20analysis%20of%20acetylation%20in%20peste%20des%20petits%20ruminants%20virus-infected%20Vero%20cells&rft.jtitle=Virology%20journal&rft.au=Meng,%20Xuelian&rft.date=2023-10-10&rft.volume=20&rft.issue=1&rft.spage=1&rft.epage=227&rft.pages=1-227&rft.artnum=227&rft.issn=1743-422X&rft.eissn=1743-422X&rft_id=info:doi/10.1186/s12985-023-02200-1&rft_dat=%3Cgale_doaj_%3EA768461970%3C/gale_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c526t-290c49d50150fd37584ab26a795cd7d4c641b23299214e41f044f71184792ee03%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2877505557&rft_id=info:pmid/&rft_galeid=A768461970&rfr_iscdi=true |