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Biodiversity and Classification of Phages Infecting Lactobacillus brevis
Lactobacillus brevis is a lactic acid bacterium that is known as a food and beverage spoilage organism, and more specifically as a beer-spoiler. Phages of L. brevis have been described, but very limited data is available regarding temperate phages of L. brevis . Temperate phages may exert benefits t...
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| Published in: | Frontiers in microbiology 2019-10, Vol.10, p.2396-2396 |
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| Main Authors: | , , , , , , , |
| Format: | Article |
| Language: | English |
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| cites | cdi_FETCH-LOGICAL-c439t-66dfbc14ef9cb8a335c7d1b738201735744439fb4caa5c18d4dab3dea5591cef3 |
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| container_title | Frontiers in microbiology |
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| creator | Feyereisen, Marine Mahony, Jennifer Neve, Horst Franz, Charles M. A. P. Noben, Jean-Paul O’Sullivan, Tadhg Boer, Viktor van Sinderen, Douwe |
| description | Lactobacillus brevis
is a lactic acid bacterium that is known as a food and beverage spoilage organism, and more specifically as a beer-spoiler. Phages of
L. brevis
have been described, but very limited data is available regarding temperate phages of
L. brevis
. Temperate phages may exert benefits to the host, while they may also be employed to combat beer spoilage. The current study reports on the incidence of prophage sequences present in nineteen distinct
L. brevis
genomes. Prophage induction was evaluated using mitomycin C exposure followed by genome targeted-PCR, electron microscopy and structural proteome analysis. The morphological and genome sequence analyses revealed significant diversity among
L. brevis
prophages, which appear to be dominated by members of the
Myoviridae
phage family. Based on this analysis, we propose a classification of
L. brevis
phages into five groups. |
| doi_str_mv | 10.3389/fmicb.2019.02396 |
| format | article |
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is a lactic acid bacterium that is known as a food and beverage spoilage organism, and more specifically as a beer-spoiler. Phages of
L. brevis
have been described, but very limited data is available regarding temperate phages of
L. brevis
. Temperate phages may exert benefits to the host, while they may also be employed to combat beer spoilage. The current study reports on the incidence of prophage sequences present in nineteen distinct
L. brevis
genomes. Prophage induction was evaluated using mitomycin C exposure followed by genome targeted-PCR, electron microscopy and structural proteome analysis. The morphological and genome sequence analyses revealed significant diversity among
L. brevis
prophages, which appear to be dominated by members of the
Myoviridae
phage family. Based on this analysis, we propose a classification of
L. brevis
phages into five groups.</description><identifier>ISSN: 1664-302X</identifier><identifier>EISSN: 1664-302X</identifier><identifier>DOI: 10.3389/fmicb.2019.02396</identifier><identifier>PMID: 31681247</identifier><language>eng</language><publisher>Frontiers Media S.A</publisher><subject>bacteriophage ; beer spoilage ; genomic analysis ; lactic acid bacteria ; lysogeny ; Microbiology ; prophage</subject><ispartof>Frontiers in microbiology, 2019-10, Vol.10, p.2396-2396</ispartof><rights>Copyright © 2019 Feyereisen, Mahony, Neve, Franz, Noben, O’Sullivan, Boer and van Sinderen. 2019 Feyereisen, Mahony, Neve, Franz, Noben, O’Sullivan, Boer and van Sinderen</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-66dfbc14ef9cb8a335c7d1b738201735744439fb4caa5c18d4dab3dea5591cef3</citedby><cites>FETCH-LOGICAL-c439t-66dfbc14ef9cb8a335c7d1b738201735744439fb4caa5c18d4dab3dea5591cef3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805780/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6805780/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids></links><search><creatorcontrib>Feyereisen, Marine</creatorcontrib><creatorcontrib>Mahony, Jennifer</creatorcontrib><creatorcontrib>Neve, Horst</creatorcontrib><creatorcontrib>Franz, Charles M. A. P.</creatorcontrib><creatorcontrib>Noben, Jean-Paul</creatorcontrib><creatorcontrib>O’Sullivan, Tadhg</creatorcontrib><creatorcontrib>Boer, Viktor</creatorcontrib><creatorcontrib>van Sinderen, Douwe</creatorcontrib><title>Biodiversity and Classification of Phages Infecting Lactobacillus brevis</title><title>Frontiers in microbiology</title><description>Lactobacillus brevis
is a lactic acid bacterium that is known as a food and beverage spoilage organism, and more specifically as a beer-spoiler. Phages of
L. brevis
have been described, but very limited data is available regarding temperate phages of
L. brevis
. Temperate phages may exert benefits to the host, while they may also be employed to combat beer spoilage. The current study reports on the incidence of prophage sequences present in nineteen distinct
L. brevis
genomes. Prophage induction was evaluated using mitomycin C exposure followed by genome targeted-PCR, electron microscopy and structural proteome analysis. The morphological and genome sequence analyses revealed significant diversity among
L. brevis
prophages, which appear to be dominated by members of the
Myoviridae
phage family. Based on this analysis, we propose a classification of
L. brevis
phages into five groups.</description><subject>bacteriophage</subject><subject>beer spoilage</subject><subject>genomic analysis</subject><subject>lactic acid bacteria</subject><subject>lysogeny</subject><subject>Microbiology</subject><subject>prophage</subject><issn>1664-302X</issn><issn>1664-302X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkUFrHDEMhU1oaUKae49z7GW3tuXxjC-BdmmahYX20EBuRpbtjcPsOLVnF_LvO9kNpdFBEtLjE-Ix9knwJUBvvsRdIreUXJgll2D0GbsQWqsFcHn_7r_-nF3V-sjnUFzO-QM7B6F7IVV3wW6_pezTIZSapucGR9-sBqw1xUQ4pTw2OTa_HnAbarMeY6ApjdtmgzRlh5SGYV8bV8Ih1Y_sfcShhqvXesnubr7_Xt0uNj9_rFdfNwtSYKaF1j46EipEQ65HgJY6L1wH_fxIB22n1KyLThFiS6L3yqMDH7BtjaAQ4ZKtT1yf8dE-lbTD8mwzJnsc5LK1WKZEQ7ARjJLROCN6rkTUrocuggcenCbe0cy6PrGe9m4XPIVxKji8gb7djOnBbvPB6p63Xc9nwOdXQMl_9qFOdpcqhWHAMeR9tRKEMLKVRs9SfpJSybWWEP-dEdy--GmPftoXP-3RT_gLwOKUKA</recordid><startdate>20191016</startdate><enddate>20191016</enddate><creator>Feyereisen, Marine</creator><creator>Mahony, Jennifer</creator><creator>Neve, Horst</creator><creator>Franz, Charles M. A. P.</creator><creator>Noben, Jean-Paul</creator><creator>O’Sullivan, Tadhg</creator><creator>Boer, Viktor</creator><creator>van Sinderen, Douwe</creator><general>Frontiers Media S.A</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20191016</creationdate><title>Biodiversity and Classification of Phages Infecting Lactobacillus brevis</title><author>Feyereisen, Marine ; Mahony, Jennifer ; Neve, Horst ; Franz, Charles M. A. P. ; Noben, Jean-Paul ; O’Sullivan, Tadhg ; Boer, Viktor ; van Sinderen, Douwe</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-66dfbc14ef9cb8a335c7d1b738201735744439fb4caa5c18d4dab3dea5591cef3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>bacteriophage</topic><topic>beer spoilage</topic><topic>genomic analysis</topic><topic>lactic acid bacteria</topic><topic>lysogeny</topic><topic>Microbiology</topic><topic>prophage</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Feyereisen, Marine</creatorcontrib><creatorcontrib>Mahony, Jennifer</creatorcontrib><creatorcontrib>Neve, Horst</creatorcontrib><creatorcontrib>Franz, Charles M. A. P.</creatorcontrib><creatorcontrib>Noben, Jean-Paul</creatorcontrib><creatorcontrib>O’Sullivan, Tadhg</creatorcontrib><creatorcontrib>Boer, Viktor</creatorcontrib><creatorcontrib>van Sinderen, Douwe</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Feyereisen, Marine</au><au>Mahony, Jennifer</au><au>Neve, Horst</au><au>Franz, Charles M. A. P.</au><au>Noben, Jean-Paul</au><au>O’Sullivan, Tadhg</au><au>Boer, Viktor</au><au>van Sinderen, Douwe</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biodiversity and Classification of Phages Infecting Lactobacillus brevis</atitle><jtitle>Frontiers in microbiology</jtitle><date>2019-10-16</date><risdate>2019</risdate><volume>10</volume><spage>2396</spage><epage>2396</epage><pages>2396-2396</pages><issn>1664-302X</issn><eissn>1664-302X</eissn><abstract>Lactobacillus brevis
is a lactic acid bacterium that is known as a food and beverage spoilage organism, and more specifically as a beer-spoiler. Phages of
L. brevis
have been described, but very limited data is available regarding temperate phages of
L. brevis
. Temperate phages may exert benefits to the host, while they may also be employed to combat beer spoilage. The current study reports on the incidence of prophage sequences present in nineteen distinct
L. brevis
genomes. Prophage induction was evaluated using mitomycin C exposure followed by genome targeted-PCR, electron microscopy and structural proteome analysis. The morphological and genome sequence analyses revealed significant diversity among
L. brevis
prophages, which appear to be dominated by members of the
Myoviridae
phage family. Based on this analysis, we propose a classification of
L. brevis
phages into five groups.</abstract><pub>Frontiers Media S.A</pub><pmid>31681247</pmid><doi>10.3389/fmicb.2019.02396</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
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| ispartof | Frontiers in microbiology, 2019-10, Vol.10, p.2396-2396 |
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| language | eng |
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| source | PubMed (Medline) |
| subjects | bacteriophage beer spoilage genomic analysis lactic acid bacteria lysogeny Microbiology prophage |
| title | Biodiversity and Classification of Phages Infecting Lactobacillus brevis |
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