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An In Silico Target Fishing Approach to Identify Novel Ochratoxin A Hydrolyzing Enzyme
Ochratoxin A (OTA), a mycotoxin that is of utmost concern in food and feed safety, is produced by fungal species that mainly belong to the and genera. The development of mitigation strategies to reduce OTA content along the supply chains is key to ensuring safer production of food and feed. Enzyme-b...
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Published in: | Toxins 2020-04, Vol.12 (4), p.258 |
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creator | Dellafiora, Luca Gonaus, Christoph Streit, Barbara Galaverna, Gianni Moll, Wulf-Dieter Vogtentanz, Gudrun Schatzmayr, Gerd Dall'Asta, Chiara Prasad, Shreenath |
description | Ochratoxin A (OTA), a mycotoxin that is of utmost concern in food and feed safety, is produced by fungal species that mainly belong to the
and
genera. The development of mitigation strategies to reduce OTA content along the supply chains is key to ensuring safer production of food and feed. Enzyme-based strategies are among the most promising methods due to their specificity, efficacy, and multi-situ applicability. In particular, some enzymes are already known for hydrolyzing OTA into ochratoxin alpha (OTα) and phenylalanine (Phe), eventually resulting in detoxification action. Therefore, the discovery of novel OTA hydrolyzing enzymes, along with the advancement of an innovative approach for their identification, could provide a broader basis to develop more effective mitigating strategies in the future. In the present study, a hybrid
workflow coupling virtual screening with enzymatic assays was applied in order to identify novel OTA hydrolyzing enzymes. Among the various hits, porcine carboxypeptidase B was identified for the first time as an effective OTA hydrolyzing enzyme. The successful experimental endorsement of findings of the workflow confirms that the presented strategy is suitable for identifying novel OTA hydrolyzing enzymes, and it might be relevant for the discovery of other mycotoxin- mitigating enzymes. |
doi_str_mv | 10.3390/toxins12040258 |
format | article |
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and
genera. The development of mitigation strategies to reduce OTA content along the supply chains is key to ensuring safer production of food and feed. Enzyme-based strategies are among the most promising methods due to their specificity, efficacy, and multi-situ applicability. In particular, some enzymes are already known for hydrolyzing OTA into ochratoxin alpha (OTα) and phenylalanine (Phe), eventually resulting in detoxification action. Therefore, the discovery of novel OTA hydrolyzing enzymes, along with the advancement of an innovative approach for their identification, could provide a broader basis to develop more effective mitigating strategies in the future. In the present study, a hybrid
workflow coupling virtual screening with enzymatic assays was applied in order to identify novel OTA hydrolyzing enzymes. Among the various hits, porcine carboxypeptidase B was identified for the first time as an effective OTA hydrolyzing enzyme. The successful experimental endorsement of findings of the workflow confirms that the presented strategy is suitable for identifying novel OTA hydrolyzing enzymes, and it might be relevant for the discovery of other mycotoxin- mitigating enzymes.</description><identifier>ISSN: 2072-6651</identifier><identifier>EISSN: 2072-6651</identifier><identifier>DOI: 10.3390/toxins12040258</identifier><identifier>PMID: 32316122</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Biochemical assays ; Composition ; Computer Simulation ; enzymatic detoxification ; Food contamination ; Hydrolysis ; Identification and classification ; in silico screening ; Ligands ; Metabolites ; Microbial enzymes ; mitigation ; mycotoxin ; Mycotoxins ; ochratoxin A ; ochratoxin alpha ; Ochratoxins - chemistry ; Peptide Hydrolases - chemistry ; Prevention</subject><ispartof>Toxins, 2020-04, Vol.12 (4), p.258</ispartof><rights>COPYRIGHT 2020 MDPI AG</rights><rights>2020 by the authors. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c484t-dfad189438bb93a6258bfc91bcf7af1800f6e78f7c2c493896bfff5dad49cfc33</citedby><cites>FETCH-LOGICAL-c484t-dfad189438bb93a6258bfc91bcf7af1800f6e78f7c2c493896bfff5dad49cfc33</cites><orcidid>0000-0002-1901-3317 ; 0000-0003-2475-8089 ; 0000-0002-4325-855X ; 0000-0001-9891-4991 ; 0000-0003-0716-8394 ; 0000-0001-9042-2378</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7232302/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7232302/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32316122$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dellafiora, Luca</creatorcontrib><creatorcontrib>Gonaus, Christoph</creatorcontrib><creatorcontrib>Streit, Barbara</creatorcontrib><creatorcontrib>Galaverna, Gianni</creatorcontrib><creatorcontrib>Moll, Wulf-Dieter</creatorcontrib><creatorcontrib>Vogtentanz, Gudrun</creatorcontrib><creatorcontrib>Schatzmayr, Gerd</creatorcontrib><creatorcontrib>Dall'Asta, Chiara</creatorcontrib><creatorcontrib>Prasad, Shreenath</creatorcontrib><title>An In Silico Target Fishing Approach to Identify Novel Ochratoxin A Hydrolyzing Enzyme</title><title>Toxins</title><addtitle>Toxins (Basel)</addtitle><description>Ochratoxin A (OTA), a mycotoxin that is of utmost concern in food and feed safety, is produced by fungal species that mainly belong to the
and
genera. The development of mitigation strategies to reduce OTA content along the supply chains is key to ensuring safer production of food and feed. Enzyme-based strategies are among the most promising methods due to their specificity, efficacy, and multi-situ applicability. In particular, some enzymes are already known for hydrolyzing OTA into ochratoxin alpha (OTα) and phenylalanine (Phe), eventually resulting in detoxification action. Therefore, the discovery of novel OTA hydrolyzing enzymes, along with the advancement of an innovative approach for their identification, could provide a broader basis to develop more effective mitigating strategies in the future. In the present study, a hybrid
workflow coupling virtual screening with enzymatic assays was applied in order to identify novel OTA hydrolyzing enzymes. Among the various hits, porcine carboxypeptidase B was identified for the first time as an effective OTA hydrolyzing enzyme. The successful experimental endorsement of findings of the workflow confirms that the presented strategy is suitable for identifying novel OTA hydrolyzing enzymes, and it might be relevant for the discovery of other mycotoxin- mitigating enzymes.</description><subject>Biochemical assays</subject><subject>Composition</subject><subject>Computer Simulation</subject><subject>enzymatic detoxification</subject><subject>Food contamination</subject><subject>Hydrolysis</subject><subject>Identification and classification</subject><subject>in silico screening</subject><subject>Ligands</subject><subject>Metabolites</subject><subject>Microbial enzymes</subject><subject>mitigation</subject><subject>mycotoxin</subject><subject>Mycotoxins</subject><subject>ochratoxin A</subject><subject>ochratoxin alpha</subject><subject>Ochratoxins - chemistry</subject><subject>Peptide Hydrolases - chemistry</subject><subject>Prevention</subject><issn>2072-6651</issn><issn>2072-6651</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkUtLAzEUhYMoVqpblxJw3ZrHPJKNMIiPgujCxzZk7iTTyHRSMqM4_fWmVkubTcLNud_JzUHonJIp55Jc9f7btR1lJCEsFQfohJGcTbIspYc75xE667oPEhfnVNL8GI044zSjjJ2g96LFsxa_uMaBx6861KbHd66bu7bGxXIZvIY57j2eVabtnR3wk_8yDX6GedC__rjAD0MVfDOs1j237WpYmFN0ZHXTmbO_fYze7m5fbx4mj8_3s5vicQKJSPpJZXVFhUy4KEvJdRanKC1IWoLNtaWCEJuZXNgcGCSSC5mV1tq00lUiwQLnYzTbcCuvP9QyuIUOg_Laqd-CD7XSoXfQGGVFCiC5TAlhiQEjU5MbyEtRMgFS0Mi63rCWn-XCVBDnDbrZg-7ftG6uav-lchb_k7AIuNwAah39XGt9lMHCdaCKjEnOSCpEVE03Kgi-64KxWwdK1DpWtR9rbLjYfddW_h8i_wEgNJ_H</recordid><startdate>20200416</startdate><enddate>20200416</enddate><creator>Dellafiora, Luca</creator><creator>Gonaus, Christoph</creator><creator>Streit, Barbara</creator><creator>Galaverna, Gianni</creator><creator>Moll, Wulf-Dieter</creator><creator>Vogtentanz, Gudrun</creator><creator>Schatzmayr, Gerd</creator><creator>Dall'Asta, Chiara</creator><creator>Prasad, Shreenath</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-1901-3317</orcidid><orcidid>https://orcid.org/0000-0003-2475-8089</orcidid><orcidid>https://orcid.org/0000-0002-4325-855X</orcidid><orcidid>https://orcid.org/0000-0001-9891-4991</orcidid><orcidid>https://orcid.org/0000-0003-0716-8394</orcidid><orcidid>https://orcid.org/0000-0001-9042-2378</orcidid></search><sort><creationdate>20200416</creationdate><title>An In Silico Target Fishing Approach to Identify Novel Ochratoxin A Hydrolyzing Enzyme</title><author>Dellafiora, Luca ; Gonaus, Christoph ; Streit, Barbara ; Galaverna, Gianni ; Moll, Wulf-Dieter ; Vogtentanz, Gudrun ; Schatzmayr, Gerd ; Dall'Asta, Chiara ; Prasad, Shreenath</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c484t-dfad189438bb93a6258bfc91bcf7af1800f6e78f7c2c493896bfff5dad49cfc33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Biochemical assays</topic><topic>Composition</topic><topic>Computer Simulation</topic><topic>enzymatic detoxification</topic><topic>Food contamination</topic><topic>Hydrolysis</topic><topic>Identification and classification</topic><topic>in silico screening</topic><topic>Ligands</topic><topic>Metabolites</topic><topic>Microbial enzymes</topic><topic>mitigation</topic><topic>mycotoxin</topic><topic>Mycotoxins</topic><topic>ochratoxin A</topic><topic>ochratoxin alpha</topic><topic>Ochratoxins - chemistry</topic><topic>Peptide Hydrolases - chemistry</topic><topic>Prevention</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dellafiora, Luca</creatorcontrib><creatorcontrib>Gonaus, Christoph</creatorcontrib><creatorcontrib>Streit, Barbara</creatorcontrib><creatorcontrib>Galaverna, Gianni</creatorcontrib><creatorcontrib>Moll, Wulf-Dieter</creatorcontrib><creatorcontrib>Vogtentanz, Gudrun</creatorcontrib><creatorcontrib>Schatzmayr, Gerd</creatorcontrib><creatorcontrib>Dall'Asta, Chiara</creatorcontrib><creatorcontrib>Prasad, Shreenath</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Toxins</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dellafiora, Luca</au><au>Gonaus, Christoph</au><au>Streit, Barbara</au><au>Galaverna, Gianni</au><au>Moll, Wulf-Dieter</au><au>Vogtentanz, Gudrun</au><au>Schatzmayr, Gerd</au><au>Dall'Asta, Chiara</au><au>Prasad, Shreenath</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>An In Silico Target Fishing Approach to Identify Novel Ochratoxin A Hydrolyzing Enzyme</atitle><jtitle>Toxins</jtitle><addtitle>Toxins (Basel)</addtitle><date>2020-04-16</date><risdate>2020</risdate><volume>12</volume><issue>4</issue><spage>258</spage><pages>258-</pages><issn>2072-6651</issn><eissn>2072-6651</eissn><abstract>Ochratoxin A (OTA), a mycotoxin that is of utmost concern in food and feed safety, is produced by fungal species that mainly belong to the
and
genera. The development of mitigation strategies to reduce OTA content along the supply chains is key to ensuring safer production of food and feed. Enzyme-based strategies are among the most promising methods due to their specificity, efficacy, and multi-situ applicability. In particular, some enzymes are already known for hydrolyzing OTA into ochratoxin alpha (OTα) and phenylalanine (Phe), eventually resulting in detoxification action. Therefore, the discovery of novel OTA hydrolyzing enzymes, along with the advancement of an innovative approach for their identification, could provide a broader basis to develop more effective mitigating strategies in the future. In the present study, a hybrid
workflow coupling virtual screening with enzymatic assays was applied in order to identify novel OTA hydrolyzing enzymes. Among the various hits, porcine carboxypeptidase B was identified for the first time as an effective OTA hydrolyzing enzyme. The successful experimental endorsement of findings of the workflow confirms that the presented strategy is suitable for identifying novel OTA hydrolyzing enzymes, and it might be relevant for the discovery of other mycotoxin- mitigating enzymes.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>32316122</pmid><doi>10.3390/toxins12040258</doi><orcidid>https://orcid.org/0000-0002-1901-3317</orcidid><orcidid>https://orcid.org/0000-0003-2475-8089</orcidid><orcidid>https://orcid.org/0000-0002-4325-855X</orcidid><orcidid>https://orcid.org/0000-0001-9891-4991</orcidid><orcidid>https://orcid.org/0000-0003-0716-8394</orcidid><orcidid>https://orcid.org/0000-0001-9042-2378</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Biochemical assays Composition Computer Simulation enzymatic detoxification Food contamination Hydrolysis Identification and classification in silico screening Ligands Metabolites Microbial enzymes mitigation mycotoxin Mycotoxins ochratoxin A ochratoxin alpha Ochratoxins - chemistry Peptide Hydrolases - chemistry Prevention |
title | An In Silico Target Fishing Approach to Identify Novel Ochratoxin A Hydrolyzing Enzyme |
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