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Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-[gamma], IP-10 and adenosine deaminase
Pleural tuberculosis (PlTB) is the most common extrapulmonary manifestation of this infectious disease which still presents high mortality rates worldwide. Conventional diagnostic tests for PlTB register multiple limitations, including the lack of sensitivity of microbiological methods on pleural sp...
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Published in: | PloS one 2018-08, Vol.13 (8), p.e0202481 |
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creator | Santos, Ana Paula Corrêa, Raquel da Silva Ribeiro-Alves, Marcelo Soares da Silva, Ana Carolina Oliveira Mafort, Thiago Thomaz Leung, Janaína Pereira, Geraldo Moura Batista Rodrigues, Luciana Silva Rufino, Rogério |
description | Pleural tuberculosis (PlTB) is the most common extrapulmonary manifestation of this infectious disease which still presents high mortality rates worldwide. Conventional diagnostic tests for PlTB register multiple limitations, including the lack of sensitivity of microbiological methods on pleural specimens and the need of invasive procedures such as pleural biopsy performance. In this scenario, the search for biological markers on pleural fluid (PF) has been the target of several studies as a strategy to overcome the limitations of PlTB diagnosis. This study aims to evaluate the use either isolated or in combination with adenosine deaminase (ADA), interferon-gamma (IFN-[gamma]), interferon-gamma inducible protein of 10-kD (IP-10) levels on PF in order to guide an accurate anti-TB treatment in microbiologically non-confirmed cases. Eighty patients presenting pleural effusion under investigation were enrolled in a cross-sectional study conducted at Pedro Ernesto University Hospital, Rio de Janeiro, RJ, Brazil. Peripheral blood (PB) and PF samples collected from all patients were applied to the commercial IFN-[gamma] release assay, QuantiFERON-TB Gold In-Tube, and samples were analyzed for IFN-[gamma] and IP-10 by immunoassays. ADA activity was determined on PF by the colorimetric method. Based on microbiological and histological criteria, patients were categorized as follow: confirmed PlTB (n = 16), non-confirmed PlTB (n = 17) and non-PlTB (n = 47). The Mycobacterium tuberculosis antigen-specific production of IFN-[gamma] and IP-10 on PB or PF did not show significant differences. However, the basal levels of these biomarkers, as well as the ADA activity on PF, were significantly increased in confirmed PlTB in comparison to non-PlTB group. Receiver operating characteristics curves were performed and the best cut-off points of these three biomarkers were estimated. Their either isolated or combined performances (sensitivity [Se], specificity [Sp], positive predictive value [PPV], negative predictive value [NPV] and accuracy [Acc]) were determined and applied to Venn's diagrams among the groups. Based on the confirmed PlTB cases, IFN-[gamma] showed the best performance of them at a cut-off point of 2.33 IU/mL (Se = 93.8% and Sp = 97.9%) followed by ADA at a cut-off of 25.80 IU/L (Se = 100% and Sp = 84.8%) and IP-10 (Cut-point = 4,361.90 pg/mL, Se = 75% and Sp = 82.6%). IFN-[gamma] plus ADA .sub.(cut-point: 25.80 IU/L) represent the most accurate biomarker comb |
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Conventional diagnostic tests for PlTB register multiple limitations, including the lack of sensitivity of microbiological methods on pleural specimens and the need of invasive procedures such as pleural biopsy performance. In this scenario, the search for biological markers on pleural fluid (PF) has been the target of several studies as a strategy to overcome the limitations of PlTB diagnosis. This study aims to evaluate the use either isolated or in combination with adenosine deaminase (ADA), interferon-gamma (IFN-[gamma]), interferon-gamma inducible protein of 10-kD (IP-10) levels on PF in order to guide an accurate anti-TB treatment in microbiologically non-confirmed cases. Eighty patients presenting pleural effusion under investigation were enrolled in a cross-sectional study conducted at Pedro Ernesto University Hospital, Rio de Janeiro, RJ, Brazil. Peripheral blood (PB) and PF samples collected from all patients were applied to the commercial IFN-[gamma] release assay, QuantiFERON-TB Gold In-Tube, and samples were analyzed for IFN-[gamma] and IP-10 by immunoassays. ADA activity was determined on PF by the colorimetric method. Based on microbiological and histological criteria, patients were categorized as follow: confirmed PlTB (n = 16), non-confirmed PlTB (n = 17) and non-PlTB (n = 47). The Mycobacterium tuberculosis antigen-specific production of IFN-[gamma] and IP-10 on PB or PF did not show significant differences. However, the basal levels of these biomarkers, as well as the ADA activity on PF, were significantly increased in confirmed PlTB in comparison to non-PlTB group. Receiver operating characteristics curves were performed and the best cut-off points of these three biomarkers were estimated. Their either isolated or combined performances (sensitivity [Se], specificity [Sp], positive predictive value [PPV], negative predictive value [NPV] and accuracy [Acc]) were determined and applied to Venn's diagrams among the groups. Based on the confirmed PlTB cases, IFN-[gamma] showed the best performance of them at a cut-off point of 2.33 IU/mL (Se = 93.8% and Sp = 97.9%) followed by ADA at a cut-off of 25.80 IU/L (Se = 100% and Sp = 84.8%) and IP-10 (Cut-point = 4,361.90 pg/mL, Se = 75% and Sp = 82.6%). IFN-[gamma] plus ADA .sub.(cut-point: 25.80 IU/L) represent the most accurate biomarker combination (98.4%), showing Se = 93.7%, Sp = 100%, PPV = 100% and NPV = 97.9%. When this analysis was applied in non-confirmed PlTB, 15/17 (88.2%) presented at least two positive biomarkers in combination. IFN-[gamma], IP-10, and ADA in PlTB effusions are significantly higher than in non-PlTB cases. IFN-[gamma] is an excellent rule-in and rule-out test compared to IP-10 and ADA. The combination of IFN-[gamma] and ADA, in a reviewed cut-off point, showed to be particularly useful to clinicians as their positive results combined prompts immediate treatment for TB while both negative results suggest further investigation.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0202481</identifier><language>eng</language><publisher>Public Library of Science</publisher><subject>Adenosine deaminase ; Diagnosis ; Health aspects ; Interferon ; Pleural diseases ; Testing ; Tuberculosis</subject><ispartof>PloS one, 2018-08, Vol.13 (8), p.e0202481</ispartof><rights>COPYRIGHT 2018 Public Library of Science</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids></links><search><creatorcontrib>Santos, Ana Paula</creatorcontrib><creatorcontrib>Corrêa, Raquel da Silva</creatorcontrib><creatorcontrib>Ribeiro-Alves, Marcelo</creatorcontrib><creatorcontrib>Soares da Silva, Ana Carolina Oliveira</creatorcontrib><creatorcontrib>Mafort, Thiago Thomaz</creatorcontrib><creatorcontrib>Leung, Janaína</creatorcontrib><creatorcontrib>Pereira, Geraldo Moura Batista</creatorcontrib><creatorcontrib>Rodrigues, Luciana Silva</creatorcontrib><creatorcontrib>Rufino, Rogério</creatorcontrib><title>Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-[gamma], IP-10 and adenosine deaminase</title><title>PloS one</title><description>Pleural tuberculosis (PlTB) is the most common extrapulmonary manifestation of this infectious disease which still presents high mortality rates worldwide. Conventional diagnostic tests for PlTB register multiple limitations, including the lack of sensitivity of microbiological methods on pleural specimens and the need of invasive procedures such as pleural biopsy performance. In this scenario, the search for biological markers on pleural fluid (PF) has been the target of several studies as a strategy to overcome the limitations of PlTB diagnosis. This study aims to evaluate the use either isolated or in combination with adenosine deaminase (ADA), interferon-gamma (IFN-[gamma]), interferon-gamma inducible protein of 10-kD (IP-10) levels on PF in order to guide an accurate anti-TB treatment in microbiologically non-confirmed cases. Eighty patients presenting pleural effusion under investigation were enrolled in a cross-sectional study conducted at Pedro Ernesto University Hospital, Rio de Janeiro, RJ, Brazil. Peripheral blood (PB) and PF samples collected from all patients were applied to the commercial IFN-[gamma] release assay, QuantiFERON-TB Gold In-Tube, and samples were analyzed for IFN-[gamma] and IP-10 by immunoassays. ADA activity was determined on PF by the colorimetric method. Based on microbiological and histological criteria, patients were categorized as follow: confirmed PlTB (n = 16), non-confirmed PlTB (n = 17) and non-PlTB (n = 47). The Mycobacterium tuberculosis antigen-specific production of IFN-[gamma] and IP-10 on PB or PF did not show significant differences. However, the basal levels of these biomarkers, as well as the ADA activity on PF, were significantly increased in confirmed PlTB in comparison to non-PlTB group. Receiver operating characteristics curves were performed and the best cut-off points of these three biomarkers were estimated. Their either isolated or combined performances (sensitivity [Se], specificity [Sp], positive predictive value [PPV], negative predictive value [NPV] and accuracy [Acc]) were determined and applied to Venn's diagrams among the groups. Based on the confirmed PlTB cases, IFN-[gamma] showed the best performance of them at a cut-off point of 2.33 IU/mL (Se = 93.8% and Sp = 97.9%) followed by ADA at a cut-off of 25.80 IU/L (Se = 100% and Sp = 84.8%) and IP-10 (Cut-point = 4,361.90 pg/mL, Se = 75% and Sp = 82.6%). IFN-[gamma] plus ADA .sub.(cut-point: 25.80 IU/L) represent the most accurate biomarker combination (98.4%), showing Se = 93.7%, Sp = 100%, PPV = 100% and NPV = 97.9%. When this analysis was applied in non-confirmed PlTB, 15/17 (88.2%) presented at least two positive biomarkers in combination. IFN-[gamma], IP-10, and ADA in PlTB effusions are significantly higher than in non-PlTB cases. IFN-[gamma] is an excellent rule-in and rule-out test compared to IP-10 and ADA. The combination of IFN-[gamma] and ADA, in a reviewed cut-off point, showed to be particularly useful to clinicians as their positive results combined prompts immediate treatment for TB while both negative results suggest further investigation.</description><subject>Adenosine deaminase</subject><subject>Diagnosis</subject><subject>Health aspects</subject><subject>Interferon</subject><subject>Pleural diseases</subject><subject>Testing</subject><subject>Tuberculosis</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNqNkU1Lw0AQhoMoWKv_wMOCoAimZpNskj2WYjVQrPjRi0iZbGbTLZtNyCbozzetHlrwIHOYr-d9DzOOc069EQ1ieruuusaAHtWVwZHne36Y0ANnQHngu5HvBYc79bFzYu3a81iQRNHA-RzXtVYCWlUZUkmyQGOuLMkVFA2URBnSrnDbmsoqu0FqjV0DmrRdho3o9HbeWWUKkk4f3fcCyhI-bkj65FKPgMkJ5LhRm94IoVQGLJ46RxK0xbPfPHTepnevkwd3Nr9PJ-OZW9Aoit04o9wXLGSC8oTTKMuSMMgTyXORBTKQMfoUWSBiHoHMwpBlscw4Mp7TEJN-M3QufnwL0LhURlZtA6JUVizHjPXmnPlxT43-oPrIsVSiv6pU_XxPcL0n6JkWv9oCOmuX6cvz_9n5Yp-93GFXCLpd2Up3m_fYXfAbLcmZMg</recordid><startdate>20180827</startdate><enddate>20180827</enddate><creator>Santos, Ana Paula</creator><creator>Corrêa, Raquel da Silva</creator><creator>Ribeiro-Alves, Marcelo</creator><creator>Soares da Silva, Ana Carolina Oliveira</creator><creator>Mafort, Thiago Thomaz</creator><creator>Leung, Janaína</creator><creator>Pereira, Geraldo Moura Batista</creator><creator>Rodrigues, Luciana Silva</creator><creator>Rufino, Rogério</creator><general>Public Library of Science</general><scope>IOV</scope><scope>ISR</scope></search><sort><creationdate>20180827</creationdate><title>Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-[gamma], IP-10 and adenosine deaminase</title><author>Santos, Ana Paula ; Corrêa, Raquel da Silva ; Ribeiro-Alves, Marcelo ; Soares da Silva, Ana Carolina Oliveira ; Mafort, Thiago Thomaz ; Leung, Janaína ; Pereira, Geraldo Moura Batista ; Rodrigues, Luciana Silva ; Rufino, Rogério</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-g1667-7b192c545c198916bb843d8f9dcb3f3f7e21e53c796afb445b7fb9e59d14e8e53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Adenosine deaminase</topic><topic>Diagnosis</topic><topic>Health aspects</topic><topic>Interferon</topic><topic>Pleural diseases</topic><topic>Testing</topic><topic>Tuberculosis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Santos, Ana Paula</creatorcontrib><creatorcontrib>Corrêa, Raquel da Silva</creatorcontrib><creatorcontrib>Ribeiro-Alves, Marcelo</creatorcontrib><creatorcontrib>Soares da Silva, Ana Carolina Oliveira</creatorcontrib><creatorcontrib>Mafort, Thiago Thomaz</creatorcontrib><creatorcontrib>Leung, Janaína</creatorcontrib><creatorcontrib>Pereira, Geraldo Moura Batista</creatorcontrib><creatorcontrib>Rodrigues, Luciana Silva</creatorcontrib><creatorcontrib>Rufino, Rogério</creatorcontrib><collection>Opposing Viewpoints Resource Center</collection><collection>Gale In Context: Science</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Santos, Ana Paula</au><au>Corrêa, Raquel da Silva</au><au>Ribeiro-Alves, Marcelo</au><au>Soares da Silva, Ana Carolina Oliveira</au><au>Mafort, Thiago Thomaz</au><au>Leung, Janaína</au><au>Pereira, Geraldo Moura Batista</au><au>Rodrigues, Luciana Silva</au><au>Rufino, Rogério</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-[gamma], IP-10 and adenosine deaminase</atitle><jtitle>PloS one</jtitle><date>2018-08-27</date><risdate>2018</risdate><volume>13</volume><issue>8</issue><spage>e0202481</spage><pages>e0202481-</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Pleural tuberculosis (PlTB) is the most common extrapulmonary manifestation of this infectious disease which still presents high mortality rates worldwide. Conventional diagnostic tests for PlTB register multiple limitations, including the lack of sensitivity of microbiological methods on pleural specimens and the need of invasive procedures such as pleural biopsy performance. In this scenario, the search for biological markers on pleural fluid (PF) has been the target of several studies as a strategy to overcome the limitations of PlTB diagnosis. This study aims to evaluate the use either isolated or in combination with adenosine deaminase (ADA), interferon-gamma (IFN-[gamma]), interferon-gamma inducible protein of 10-kD (IP-10) levels on PF in order to guide an accurate anti-TB treatment in microbiologically non-confirmed cases. Eighty patients presenting pleural effusion under investigation were enrolled in a cross-sectional study conducted at Pedro Ernesto University Hospital, Rio de Janeiro, RJ, Brazil. Peripheral blood (PB) and PF samples collected from all patients were applied to the commercial IFN-[gamma] release assay, QuantiFERON-TB Gold In-Tube, and samples were analyzed for IFN-[gamma] and IP-10 by immunoassays. ADA activity was determined on PF by the colorimetric method. Based on microbiological and histological criteria, patients were categorized as follow: confirmed PlTB (n = 16), non-confirmed PlTB (n = 17) and non-PlTB (n = 47). The Mycobacterium tuberculosis antigen-specific production of IFN-[gamma] and IP-10 on PB or PF did not show significant differences. However, the basal levels of these biomarkers, as well as the ADA activity on PF, were significantly increased in confirmed PlTB in comparison to non-PlTB group. Receiver operating characteristics curves were performed and the best cut-off points of these three biomarkers were estimated. Their either isolated or combined performances (sensitivity [Se], specificity [Sp], positive predictive value [PPV], negative predictive value [NPV] and accuracy [Acc]) were determined and applied to Venn's diagrams among the groups. Based on the confirmed PlTB cases, IFN-[gamma] showed the best performance of them at a cut-off point of 2.33 IU/mL (Se = 93.8% and Sp = 97.9%) followed by ADA at a cut-off of 25.80 IU/L (Se = 100% and Sp = 84.8%) and IP-10 (Cut-point = 4,361.90 pg/mL, Se = 75% and Sp = 82.6%). IFN-[gamma] plus ADA .sub.(cut-point: 25.80 IU/L) represent the most accurate biomarker combination (98.4%), showing Se = 93.7%, Sp = 100%, PPV = 100% and NPV = 97.9%. When this analysis was applied in non-confirmed PlTB, 15/17 (88.2%) presented at least two positive biomarkers in combination. IFN-[gamma], IP-10, and ADA in PlTB effusions are significantly higher than in non-PlTB cases. IFN-[gamma] is an excellent rule-in and rule-out test compared to IP-10 and ADA. The combination of IFN-[gamma] and ADA, in a reviewed cut-off point, showed to be particularly useful to clinicians as their positive results combined prompts immediate treatment for TB while both negative results suggest further investigation.</abstract><pub>Public Library of Science</pub><doi>10.1371/journal.pone.0202481</doi><tpages>e0202481</tpages></addata></record> |
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subjects | Adenosine deaminase Diagnosis Health aspects Interferon Pleural diseases Testing Tuberculosis |
title | Application of Venn's diagram in the diagnosis of pleural tuberculosis using IFN-[gamma], IP-10 and adenosine deaminase |
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