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Genetic characterization of G3 rotaviruses detected in Italian children in the years 1993-2005
In recent years an apparent increase in the frequency of detection of G3P[8] rotaviruses has been observed worldwide. Similarly, in Italy G3P[8] strains have been detected sporadically and in a scattered fashion over 20 years, whereas in 2003 and 2005 G3P[8] rotavirus activity increased markedly. By...
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| Published in: | Journal of medical virology 2009-12, Vol.81 (12), p.2089-2095 |
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| Main Authors: | , , , , , |
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| cites | cdi_FETCH-LOGICAL-c4855-5e7791706b563811ab359eba9c151bae1aa39e9ccaf6100e813892bace7646393 |
| container_end_page | 2095 |
| container_issue | 12 |
| container_start_page | 2089 |
| container_title | Journal of medical virology |
| container_volume | 81 |
| creator | De Grazia, Simona Martella, Vito Colomba, Claudia Cascio, Antonio Arista, Serenella Giammanco, Giovanni M |
| description | In recent years an apparent increase in the frequency of detection of G3P[8] rotaviruses has been observed worldwide. Similarly, in Italy G3P[8] strains have been detected sporadically and in a scattered fashion over 20 years, whereas in 2003 and 2005 G3P[8] rotavirus activity increased markedly. By analysis of the VP7, VP4, VP6, and NSP4 genes of a selection of G3P[8] rotaviruses detected between 1993 and 2005, a remarkable sequence conservation was observed in the VP7, VP4, and VP6 genes. By converse, after 2002 the Italian G3P[8] strains were found to possess unique mutations in significant regions of the NSP4 protein. J. Med. Virol. 81:2089-2095, 2009. |
| doi_str_mv | 10.1002/jmv.21615 |
| format | article |
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Similarly, in Italy G3P[8] strains have been detected sporadically and in a scattered fashion over 20 years, whereas in 2003 and 2005 G3P[8] rotavirus activity increased markedly. By analysis of the VP7, VP4, VP6, and NSP4 genes of a selection of G3P[8] rotaviruses detected between 1993 and 2005, a remarkable sequence conservation was observed in the VP7, VP4, and VP6 genes. By converse, after 2002 the Italian G3P[8] strains were found to possess unique mutations in significant regions of the NSP4 protein. J. Med. Virol. 81:2089-2095, 2009.</description><identifier>ISSN: 0146-6615</identifier><identifier>EISSN: 1096-9071</identifier><identifier>DOI: 10.1002/jmv.21615</identifier><identifier>PMID: 19856472</identifier><identifier>CODEN: JMVIDB</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Amino Acid Sequence ; Antigens, Viral - analysis ; Antigens, Viral - genetics ; Biological and medical sciences ; Capsid Proteins - analysis ; Capsid Proteins - genetics ; Child, Preschool ; Feces - virology ; Fundamental and applied biological sciences. 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Med. Virol</addtitle><description>In recent years an apparent increase in the frequency of detection of G3P[8] rotaviruses has been observed worldwide. Similarly, in Italy G3P[8] strains have been detected sporadically and in a scattered fashion over 20 years, whereas in 2003 and 2005 G3P[8] rotavirus activity increased markedly. By analysis of the VP7, VP4, VP6, and NSP4 genes of a selection of G3P[8] rotaviruses detected between 1993 and 2005, a remarkable sequence conservation was observed in the VP7, VP4, and VP6 genes. By converse, after 2002 the Italian G3P[8] strains were found to possess unique mutations in significant regions of the NSP4 protein. J. Med. Virol. 81:2089-2095, 2009.</description><subject>Amino Acid Sequence</subject><subject>Antigens, Viral - analysis</subject><subject>Antigens, Viral - genetics</subject><subject>Biological and medical sciences</subject><subject>Capsid Proteins - analysis</subject><subject>Capsid Proteins - genetics</subject><subject>Child, Preschool</subject><subject>Feces - virology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gastroenteritis</subject><subject>Genetics</subject><subject>Glycoproteins - analysis</subject><subject>Glycoproteins - genetics</subject><subject>Human viral diseases</subject><subject>Humans</subject><subject>Infant</subject><subject>Infant, Newborn</subject><subject>Infectious diseases</subject><subject>Italy</subject><subject>Italy - epidemiology</subject><subject>Medical sciences</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>NSP4</subject><subject>Phylogeny</subject><subject>RNA, Viral - genetics</subject><subject>RNA, Viral - isolation & purification</subject><subject>Rotavirus - genetics</subject><subject>rotavirus G3P</subject><subject>Rotavirus Infections - epidemiology</subject><subject>Rotavirus Infections - virology</subject><subject>sequence analysis</subject><subject>Sequence Analysis, RNA</subject><subject>Toxins, Biological - analysis</subject><subject>Toxins, Biological - genetics</subject><subject>Viral diseases</subject><subject>Viral Nonstructural Proteins - analysis</subject><subject>Viral Nonstructural Proteins - genetics</subject><subject>Virology</subject><issn>0146-6615</issn><issn>1096-9071</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNp1kUFvEzEQhS0EoqFw4A_AXirEYVuPvWuvj1UFSVECEqWFE9asM0tcNrvF3gTCr8chIT1xsvT0vTczz4w9B34KnIuz2-X6VICC8gEbATcqN1zDQzbiUKhcJf2IPYnxlnNeGSEesyMwVakKLUbs65g6GrzL3AIDuoGC_42D77usb7KxzEI_4NqHVaSYzWmgRMwz32WXA7Yeu2Tz7TxQt9WGBWUbwhAzMEbmgvPyKXvUYBvp2f49Ztdv33y6mOTTD-PLi_Np7oqqLPOStDaguapLJSsArGVpqEbjoIQaCRClIeMcNipdTBXIdEmNjrQqlDTymL3e5S6wtXfBLzFsbI_eTs6ndqulXSRUolhDYl_t2LvQ_1hRHOzSR0dtix31q2i1LACMqtR9qgt9jIGaQzRwu23epubt3-YT-2KfuqqXNL8n91Un4GQPYHTYNgE75-OBEwLSgrJK3NmO--lb2vx_on03u_k3Ot85fBzo18GB4btVWurSfn4_tpOPN_JqNvtii8S_3PEN9ha_hbTF9ZXgIHn6Al5okH8A8TKvfA</recordid><startdate>200912</startdate><enddate>200912</enddate><creator>De Grazia, Simona</creator><creator>Martella, Vito</creator><creator>Colomba, Claudia</creator><creator>Cascio, Antonio</creator><creator>Arista, Serenella</creator><creator>Giammanco, Giovanni M</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley</general><general>Wiley-Blackwell</general><scope>FBQ</scope><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>1XC</scope><scope>VOOES</scope></search><sort><creationdate>200912</creationdate><title>Genetic characterization of G3 rotaviruses detected in Italian children in the years 1993-2005</title><author>De Grazia, Simona ; Martella, Vito ; Colomba, Claudia ; Cascio, Antonio ; Arista, Serenella ; Giammanco, Giovanni M</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4855-5e7791706b563811ab359eba9c151bae1aa39e9ccaf6100e813892bace7646393</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amino Acid Sequence</topic><topic>Antigens, Viral - analysis</topic><topic>Antigens, Viral - genetics</topic><topic>Biological and medical sciences</topic><topic>Capsid Proteins - analysis</topic><topic>Capsid Proteins - genetics</topic><topic>Child, Preschool</topic><topic>Feces - virology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gastroenteritis</topic><topic>Genetics</topic><topic>Glycoproteins - analysis</topic><topic>Glycoproteins - genetics</topic><topic>Human viral diseases</topic><topic>Humans</topic><topic>Infant</topic><topic>Infant, Newborn</topic><topic>Infectious diseases</topic><topic>Italy</topic><topic>Italy - epidemiology</topic><topic>Medical sciences</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>NSP4</topic><topic>Phylogeny</topic><topic>RNA, Viral - genetics</topic><topic>RNA, Viral - isolation & purification</topic><topic>Rotavirus - genetics</topic><topic>rotavirus G3P</topic><topic>Rotavirus Infections - epidemiology</topic><topic>Rotavirus Infections - virology</topic><topic>sequence analysis</topic><topic>Sequence Analysis, RNA</topic><topic>Toxins, Biological - analysis</topic><topic>Toxins, Biological - genetics</topic><topic>Viral diseases</topic><topic>Viral Nonstructural Proteins - analysis</topic><topic>Viral Nonstructural Proteins - genetics</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>De Grazia, Simona</creatorcontrib><creatorcontrib>Martella, Vito</creatorcontrib><creatorcontrib>Colomba, Claudia</creatorcontrib><creatorcontrib>Cascio, Antonio</creatorcontrib><creatorcontrib>Arista, Serenella</creatorcontrib><creatorcontrib>Giammanco, Giovanni M</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>Hyper Article en Ligne (HAL) (Open Access)</collection><jtitle>Journal of medical virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>De Grazia, Simona</au><au>Martella, Vito</au><au>Colomba, Claudia</au><au>Cascio, Antonio</au><au>Arista, Serenella</au><au>Giammanco, Giovanni M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic characterization of G3 rotaviruses detected in Italian children in the years 1993-2005</atitle><jtitle>Journal of medical virology</jtitle><addtitle>J. Med. Virol</addtitle><date>2009-12</date><risdate>2009</risdate><volume>81</volume><issue>12</issue><spage>2089</spage><epage>2095</epage><pages>2089-2095</pages><issn>0146-6615</issn><eissn>1096-9071</eissn><coden>JMVIDB</coden><abstract>In recent years an apparent increase in the frequency of detection of G3P[8] rotaviruses has been observed worldwide. Similarly, in Italy G3P[8] strains have been detected sporadically and in a scattered fashion over 20 years, whereas in 2003 and 2005 G3P[8] rotavirus activity increased markedly. By analysis of the VP7, VP4, VP6, and NSP4 genes of a selection of G3P[8] rotaviruses detected between 1993 and 2005, a remarkable sequence conservation was observed in the VP7, VP4, and VP6 genes. By converse, after 2002 the Italian G3P[8] strains were found to possess unique mutations in significant regions of the NSP4 protein. J. Med. 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| ispartof | Journal of medical virology, 2009-12, Vol.81 (12), p.2089-2095 |
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| subjects | Amino Acid Sequence Antigens, Viral - analysis Antigens, Viral - genetics Biological and medical sciences Capsid Proteins - analysis Capsid Proteins - genetics Child, Preschool Feces - virology Fundamental and applied biological sciences. Psychology gastroenteritis Genetics Glycoproteins - analysis Glycoproteins - genetics Human viral diseases Humans Infant Infant, Newborn Infectious diseases Italy Italy - epidemiology Medical sciences Microbiology Miscellaneous Molecular Sequence Data NSP4 Phylogeny RNA, Viral - genetics RNA, Viral - isolation & purification Rotavirus - genetics rotavirus G3P Rotavirus Infections - epidemiology Rotavirus Infections - virology sequence analysis Sequence Analysis, RNA Toxins, Biological - analysis Toxins, Biological - genetics Viral diseases Viral Nonstructural Proteins - analysis Viral Nonstructural Proteins - genetics Virology |
| title | Genetic characterization of G3 rotaviruses detected in Italian children in the years 1993-2005 |
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