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GPU-based surface oriented interslice directional interpolation for volume visualization
Laser scanning confocal endomicroscopy (LSCEM) is emerging as an in vivo 3D cellular imaging technology. However, the image datasets acquired from LSCEM are generally with low z-depth resolution, which causes artifacts in volume rendering. Intermediate data between consecutive images needs to be gen...
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creator | Movania, M.M. Feng Zhao Lee Sing Cheong Feng Lin Kemao Qian Hock Soon Seah |
description | Laser scanning confocal endomicroscopy (LSCEM) is emerging as an in vivo 3D cellular imaging technology. However, the image datasets acquired from LSCEM are generally with low z-depth resolution, which causes artifacts in volume rendering. Intermediate data between consecutive images needs to be generated. One common solution uses trilinear interpolation which more or less reduces the artifacts, but blocky artifacts are clearly visible especially in the areas of low spatial resolution. The current shape-based interpolation techniques cannot effectively remove such artifacts since they rely on the hard classification for identification of shape features. At the same time, the higher order interpolation schemes like cubic b-spline interpolation take much time to process the slices. In this paper, we propose a novel GPU-based surface oriented inter-slice directional interpolation algorithm to recover the missing information and thus minimize the interpolation artifacts. Our algorithm enjoys full floating point precision offered by the modern GPU to enhance the visualization result. Experimental results on several datasets clearly demonstrate the effectiveness of the new method. |
doi_str_mv | 10.1109/ISABEL.2009.5373666 |
format | conference_proceeding |
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However, the image datasets acquired from LSCEM are generally with low z-depth resolution, which causes artifacts in volume rendering. Intermediate data between consecutive images needs to be generated. One common solution uses trilinear interpolation which more or less reduces the artifacts, but blocky artifacts are clearly visible especially in the areas of low spatial resolution. The current shape-based interpolation techniques cannot effectively remove such artifacts since they rely on the hard classification for identification of shape features. At the same time, the higher order interpolation schemes like cubic b-spline interpolation take much time to process the slices. In this paper, we propose a novel GPU-based surface oriented inter-slice directional interpolation algorithm to recover the missing information and thus minimize the interpolation artifacts. Our algorithm enjoys full floating point precision offered by the modern GPU to enhance the visualization result. 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Experimental results on several datasets clearly demonstrate the effectiveness of the new method.</description><subject>Cancer</subject><subject>directional interpolation</subject><subject>Endomicroscopy image</subject><subject>Image resolution</subject><subject>In vivo</subject><subject>Interpolation</subject><subject>Noise shaping</subject><subject>Object detection</subject><subject>Optical imaging</subject><subject>Shape</subject><subject>Spatial resolution</subject><subject>Visualization</subject><subject>volume visualization</subject><issn>2325-5315</issn><issn>2325-5331</issn><isbn>9781424446407</isbn><isbn>1424446406</isbn><isbn>1424446414</isbn><isbn>9781424446414</isbn><fulltext>true</fulltext><rsrctype>conference_proceeding</rsrctype><creationdate>2009</creationdate><recordtype>conference_proceeding</recordtype><sourceid>6IE</sourceid><recordid>eNo9kN1qwkAQRrc_QtXmCbzJCyTdzczuZi-tWCsEWqiF3skmmcCWaGRXhfbpG6vtXMww58AHM4xNBE-F4OZh-TZ9nBdpxrlJJWhQSl2xkcAMERUKvGbDDDKZSABxwyKj8z_H9e2_E3LARqcMwxG0uWNRCJ-8L5SZUXLIPhav70lpA9VxOPjGVhR33tF23wPXdx9a17Paear2rtva9ox3XWtPe9x0Pj527WFD8dGFg23d96-4Z4PGtoGiyxyz1dN8NXtOipfFcjYtEmf4PlGV0LpuSOcNV1VlJGYSrOUEuuK1thopL1GRJoOqrFV_ngXUgIANWFIwZpNzrCOi9c67jfVf68vD4Ae9yVpz</recordid><startdate>200911</startdate><enddate>200911</enddate><creator>Movania, M.M.</creator><creator>Feng Zhao</creator><creator>Lee Sing Cheong</creator><creator>Feng Lin</creator><creator>Kemao Qian</creator><creator>Hock Soon Seah</creator><general>IEEE</general><scope>6IE</scope><scope>6IL</scope><scope>CBEJK</scope><scope>RIE</scope><scope>RIL</scope></search><sort><creationdate>200911</creationdate><title>GPU-based surface oriented interslice directional interpolation for volume visualization</title><author>Movania, M.M. ; Feng Zhao ; Lee Sing Cheong ; Feng Lin ; Kemao Qian ; Hock Soon Seah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-i90t-6c177dfe78f06cc954253aa0e37c0d7a74e8b46e7e946bd6464a3473434f3ae63</frbrgroupid><rsrctype>conference_proceedings</rsrctype><prefilter>conference_proceedings</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Cancer</topic><topic>directional interpolation</topic><topic>Endomicroscopy image</topic><topic>Image resolution</topic><topic>In vivo</topic><topic>Interpolation</topic><topic>Noise shaping</topic><topic>Object detection</topic><topic>Optical imaging</topic><topic>Shape</topic><topic>Spatial resolution</topic><topic>Visualization</topic><topic>volume visualization</topic><toplevel>online_resources</toplevel><creatorcontrib>Movania, M.M.</creatorcontrib><creatorcontrib>Feng Zhao</creatorcontrib><creatorcontrib>Lee Sing Cheong</creatorcontrib><creatorcontrib>Feng Lin</creatorcontrib><creatorcontrib>Kemao Qian</creatorcontrib><creatorcontrib>Hock Soon Seah</creatorcontrib><collection>IEEE Electronic Library (IEL) Conference Proceedings</collection><collection>IEEE Proceedings Order Plan All Online (POP All Online) 1998-present by volume</collection><collection>IEEE Xplore All Conference Proceedings</collection><collection>IEEE/IET Electronic Library (IEL)</collection><collection>IEEE Proceedings Order Plans (POP All) 1998-Present</collection></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Movania, M.M.</au><au>Feng Zhao</au><au>Lee Sing Cheong</au><au>Feng Lin</au><au>Kemao Qian</au><au>Hock Soon Seah</au><format>book</format><genre>proceeding</genre><ristype>CONF</ristype><atitle>GPU-based surface oriented interslice directional interpolation for volume visualization</atitle><btitle>2009 2nd International Symposium on Applied Sciences in Biomedical and Communication Technologies</btitle><stitle>ISABEL</stitle><date>2009-11</date><risdate>2009</risdate><spage>1</spage><epage>5</epage><pages>1-5</pages><issn>2325-5315</issn><eissn>2325-5331</eissn><isbn>9781424446407</isbn><isbn>1424446406</isbn><eisbn>1424446414</eisbn><eisbn>9781424446414</eisbn><abstract>Laser scanning confocal endomicroscopy (LSCEM) is emerging as an in vivo 3D cellular imaging technology. However, the image datasets acquired from LSCEM are generally with low z-depth resolution, which causes artifacts in volume rendering. Intermediate data between consecutive images needs to be generated. One common solution uses trilinear interpolation which more or less reduces the artifacts, but blocky artifacts are clearly visible especially in the areas of low spatial resolution. The current shape-based interpolation techniques cannot effectively remove such artifacts since they rely on the hard classification for identification of shape features. At the same time, the higher order interpolation schemes like cubic b-spline interpolation take much time to process the slices. In this paper, we propose a novel GPU-based surface oriented inter-slice directional interpolation algorithm to recover the missing information and thus minimize the interpolation artifacts. Our algorithm enjoys full floating point precision offered by the modern GPU to enhance the visualization result. Experimental results on several datasets clearly demonstrate the effectiveness of the new method.</abstract><pub>IEEE</pub><doi>10.1109/ISABEL.2009.5373666</doi><tpages>5</tpages></addata></record> |
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subjects | Cancer directional interpolation Endomicroscopy image Image resolution In vivo Interpolation Noise shaping Object detection Optical imaging Shape Spatial resolution Visualization volume visualization |
title | GPU-based surface oriented interslice directional interpolation for volume visualization |
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