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Evaluation and biosynthetic incorporation of chlorotyrosine into recombinant proteins
Recently, non-canonical amino acids (NCAA) incorporation was developed to enhance the functional properties of proteins. Incorporation of NCAA containing chlorine atom is conceptually an attractive approach to prepare pharmacologically active substances, which is a difficult task since chlorine is b...
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Published in: | Biotechnology and bioprocess engineering 2012, 17(4), , pp.679-686 |
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creator | Ayyadurai, Niraikulam, King Saud University, Riyadh, Saudi Arabia Deepankumar, Kanagavel, Yeungnam University, Gyeongsan, Republic of Korea Prabhu, Nadarajan Saravanan, Yeungnam University, Gyeongsan, Republic of Korea Budisa, Nediljko, Biocatalysis Group, Institute of Chemistry, Berlin Institute of Technology/TU Berlin, Berlin, Germany Yun, H.D., Yeungnam University, Gyeongsan, Republic of Korea |
description | Recently, non-canonical amino acids (NCAA) incorporation was developed to enhance the functional properties of proteins. Incorporation of NCAA containing chlorine atom is conceptually an attractive approach to prepare pharmacologically active substances, which is a difficult task since chlorine is bulky atom. In this study, we evaluated the efficiency and extent of in vivo incorporation of tyrosine analogue 3-chlorotyrosine [(3-Cl)Tyr] into the recombinant proteins GFP and GFPHS (highly stable GFP). The incorporation of (3-Cl)Tyr into GFP leads to dramatic reduction in the expression level of protein. On the other hand, the incorporation of (3-Cl)Tyr into GFPHS was expressed well as a soluble form. In addition we used bioinformatics tools for the analysis to explore the possible constraints in micro-environment of each natural amino acid residue to be replaced with chlorine atom accommodation into GFPHS. In conclusion, our approaches are reliable and straightforward way to enhance the translation of chlorinated amino acids into proteins. |
doi_str_mv | 10.1007/s12257-012-0066-6 |
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Incorporation of NCAA containing chlorine atom is conceptually an attractive approach to prepare pharmacologically active substances, which is a difficult task since chlorine is bulky atom. In this study, we evaluated the efficiency and extent of in vivo incorporation of tyrosine analogue 3-chlorotyrosine [(3-Cl)Tyr] into the recombinant proteins GFP and GFPHS (highly stable GFP). The incorporation of (3-Cl)Tyr into GFP leads to dramatic reduction in the expression level of protein. On the other hand, the incorporation of (3-Cl)Tyr into GFPHS was expressed well as a soluble form. In addition we used bioinformatics tools for the analysis to explore the possible constraints in micro-environment of each natural amino acid residue to be replaced with chlorine atom accommodation into GFPHS. In conclusion, our approaches are reliable and straightforward way to enhance the translation of chlorinated amino acids into proteins.</description><identifier>ISSN: 1226-8372</identifier><identifier>EISSN: 1976-3816</identifier><identifier>DOI: 10.1007/s12257-012-0066-6</identifier><language>eng</language><publisher>Heidelberg: The Korean Society for Biotechnology and Bioengineering</publisher><subject>Amino acids ; Analysis ; Binding sites ; Bioinformatics ; Biotechnology ; Chemical engineering ; Chemistry ; Chemistry and Materials Science ; Chlorine ; chloro-tyrosine ; E coli ; Efficiency ; Genetic engineering ; GFP ; homology modeling ; Industrial and Production Engineering ; noncanonical amino acids ; Polymers ; protein engineering ; Protein folding ; Protein synthesis ; PROTEINAS ; PROTEINE ; PROTEINS ; Research Paper ; Studies ; Transfer RNA ; Translation ; Tyrosine ; 생물공학</subject><ispartof>Biotechnology and Bioprocess Engineering, 2012, 17(4), , pp.679-686</ispartof><rights>The Korean Society for Biotechnology and Bioengineering and Springer-Verlag Berlin Heidelberg 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c404t-5f9d874ef40da1b50a3a94ba2a5d00cf92063ca01f6ba5e005e9b73c08325f603</citedby><cites>FETCH-LOGICAL-c404t-5f9d874ef40da1b50a3a94ba2a5d00cf92063ca01f6ba5e005e9b73c08325f603</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1037270110/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$H</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1037270110?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,780,784,11688,27924,27925,36060,36061,44363,74895</link.rule.ids><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART001692334$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Ayyadurai, Niraikulam, King Saud University, Riyadh, Saudi Arabia</creatorcontrib><creatorcontrib>Deepankumar, Kanagavel, Yeungnam University, Gyeongsan, Republic of Korea</creatorcontrib><creatorcontrib>Prabhu, Nadarajan Saravanan, Yeungnam University, Gyeongsan, Republic of Korea</creatorcontrib><creatorcontrib>Budisa, Nediljko, Biocatalysis Group, Institute of Chemistry, Berlin Institute of Technology/TU Berlin, Berlin, Germany</creatorcontrib><creatorcontrib>Yun, H.D., Yeungnam University, Gyeongsan, Republic of Korea</creatorcontrib><title>Evaluation and biosynthetic incorporation of chlorotyrosine into recombinant proteins</title><title>Biotechnology and bioprocess engineering</title><addtitle>Biotechnol Bioproc E</addtitle><description>Recently, non-canonical amino acids (NCAA) incorporation was developed to enhance the functional properties of proteins. Incorporation of NCAA containing chlorine atom is conceptually an attractive approach to prepare pharmacologically active substances, which is a difficult task since chlorine is bulky atom. In this study, we evaluated the efficiency and extent of in vivo incorporation of tyrosine analogue 3-chlorotyrosine [(3-Cl)Tyr] into the recombinant proteins GFP and GFPHS (highly stable GFP). The incorporation of (3-Cl)Tyr into GFP leads to dramatic reduction in the expression level of protein. On the other hand, the incorporation of (3-Cl)Tyr into GFPHS was expressed well as a soluble form. In addition we used bioinformatics tools for the analysis to explore the possible constraints in micro-environment of each natural amino acid residue to be replaced with chlorine atom accommodation into GFPHS. In conclusion, our approaches are reliable and straightforward way to enhance the translation of chlorinated amino acids into proteins.</description><subject>Amino acids</subject><subject>Analysis</subject><subject>Binding sites</subject><subject>Bioinformatics</subject><subject>Biotechnology</subject><subject>Chemical engineering</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Chlorine</subject><subject>chloro-tyrosine</subject><subject>E coli</subject><subject>Efficiency</subject><subject>Genetic engineering</subject><subject>GFP</subject><subject>homology modeling</subject><subject>Industrial and Production Engineering</subject><subject>noncanonical amino acids</subject><subject>Polymers</subject><subject>protein engineering</subject><subject>Protein folding</subject><subject>Protein synthesis</subject><subject>PROTEINAS</subject><subject>PROTEINE</subject><subject>PROTEINS</subject><subject>Research Paper</subject><subject>Studies</subject><subject>Transfer RNA</subject><subject>Translation</subject><subject>Tyrosine</subject><subject>생물공학</subject><issn>1226-8372</issn><issn>1976-3816</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>M0C</sourceid><recordid>eNp1kU9LAzEQxRdRsFY_gAdhwYuX1Umym-weRfxTFITSnsNsmrTRbVKTrdBvb-p6EMHTBN7vPTLzsuycwDUBEDeRUFqJAggtADgv-EE2Io3gBasJP0xvSnlRM0GPs5MY3wBKUdf1KJvff2K3xd56l6Nb5K31cef6le6tyq1TPmx8GGRvcrXqfPD9LvhonU567_OglV-31qHr800StXXxNDsy2EV99jPH2fzhfnb3VLy8Pk7ubl8KVULZF5VpFrUotSlhgaStABk2ZYsUqwWAMg0FzhQCMbzFSgNUumkFU1AzWhkObJxdDbkuGPmurPRov-fSy_cgb6eziSSC1-UvNP3xY6tjL9c2Kt116LTfRkmAN6SpmBAJvfyDvvltcGmRRKUTCiBkH0gGSqVrxKCN3AS7xrBLkNx3IodOZOpE7juRPHno4ImJdUsdfif_b7oYTAa9xGWwUT5PKRAGCYKGfQGWyJfH</recordid><startdate>20120801</startdate><enddate>20120801</enddate><creator>Ayyadurai, Niraikulam, King Saud University, Riyadh, Saudi Arabia</creator><creator>Deepankumar, 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Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ayyadurai, Niraikulam, King Saud University, Riyadh, Saudi Arabia</au><au>Deepankumar, Kanagavel, Yeungnam University, Gyeongsan, Republic of Korea</au><au>Prabhu, Nadarajan Saravanan, Yeungnam University, Gyeongsan, Republic of Korea</au><au>Budisa, Nediljko, Biocatalysis Group, Institute of Chemistry, Berlin Institute of Technology/TU Berlin, Berlin, Germany</au><au>Yun, H.D., Yeungnam University, Gyeongsan, Republic of Korea</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evaluation and biosynthetic incorporation of chlorotyrosine into recombinant proteins</atitle><jtitle>Biotechnology and bioprocess engineering</jtitle><stitle>Biotechnol Bioproc E</stitle><date>2012-08-01</date><risdate>2012</risdate><volume>17</volume><issue>4</issue><spage>679</spage><epage>686</epage><pages>679-686</pages><issn>1226-8372</issn><eissn>1976-3816</eissn><abstract>Recently, non-canonical amino acids (NCAA) incorporation was developed to enhance the functional properties of proteins. Incorporation of NCAA containing chlorine atom is conceptually an attractive approach to prepare pharmacologically active substances, which is a difficult task since chlorine is bulky atom. In this study, we evaluated the efficiency and extent of in vivo incorporation of tyrosine analogue 3-chlorotyrosine [(3-Cl)Tyr] into the recombinant proteins GFP and GFPHS (highly stable GFP). The incorporation of (3-Cl)Tyr into GFP leads to dramatic reduction in the expression level of protein. On the other hand, the incorporation of (3-Cl)Tyr into GFPHS was expressed well as a soluble form. In addition we used bioinformatics tools for the analysis to explore the possible constraints in micro-environment of each natural amino acid residue to be replaced with chlorine atom accommodation into GFPHS. In conclusion, our approaches are reliable and straightforward way to enhance the translation of chlorinated amino acids into proteins.</abstract><cop>Heidelberg</cop><pub>The Korean Society for Biotechnology and Bioengineering</pub><doi>10.1007/s12257-012-0066-6</doi><tpages>8</tpages></addata></record> |
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subjects | Amino acids Analysis Binding sites Bioinformatics Biotechnology Chemical engineering Chemistry Chemistry and Materials Science Chlorine chloro-tyrosine E coli Efficiency Genetic engineering GFP homology modeling Industrial and Production Engineering noncanonical amino acids Polymers protein engineering Protein folding Protein synthesis PROTEINAS PROTEINE PROTEINS Research Paper Studies Transfer RNA Translation Tyrosine 생물공학 |
title | Evaluation and biosynthetic incorporation of chlorotyrosine into recombinant proteins |
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