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Genetic characterization of Barbari goats using microsatellite markers
Genetic variation in Barbari goats, a highly prolific breed distributed widely in the northern part of India, known for better milk and meat quality, was studied as a part of genetic characterization and conservation. The genomic DNA from 50 unrelated Barbari goats were amplified via PCR with a pane...
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Published in: | Journal of veterinary science (Suwŏn-si, Korea) 2009, 10(1), , pp.73-76 |
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creator | Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India |
description | Genetic variation in Barbari goats, a highly prolific breed distributed widely in the northern part of India, known for better milk and meat quality, was studied as a part of genetic characterization and conservation. The genomic DNA from 50 unrelated Barbari goats were amplified via PCR with a panel of 21 microsatellite markers, and resolved through 6 per cent denaturing polyacrylamide gel electrophoresis followed by silver staining. The number of alleles ranged from 4 to 11, with allele sizes ranging from 88 to 220 bp. The distribution of allele frequencies was between 0.0104 and 0.5208. Polymorphism information content varied from 0.5563 to 0.8348. The population was not in Hardy-Weinberg equilibrium for all except two microsatellite loci (ILSTS044 and ILSTS060). The observed heterozygosity ranged from 0.8478 to 1.0000 while the expected heterozygosity ranged from 0.6208 to 0.8509. Based on the results of the present study, there is a good scope for exploiting the genetic variability in the Barbari goats for further improvement of performance. |
doi_str_mv | 10.4142/jvs.2009.10.1.73 |
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The genomic DNA from 50 unrelated Barbari goats were amplified via PCR with a panel of 21 microsatellite markers, and resolved through 6 per cent denaturing polyacrylamide gel electrophoresis followed by silver staining. The number of alleles ranged from 4 to 11, with allele sizes ranging from 88 to 220 bp. The distribution of allele frequencies was between 0.0104 and 0.5208. Polymorphism information content varied from 0.5563 to 0.8348. The population was not in Hardy-Weinberg equilibrium for all except two microsatellite loci (ILSTS044 and ILSTS060). The observed heterozygosity ranged from 0.8478 to 1.0000 while the expected heterozygosity ranged from 0.6208 to 0.8509. Based on the results of the present study, there is a good scope for exploiting the genetic variability in the Barbari goats for further improvement of performance.</description><identifier>ISSN: 1229-845X</identifier><identifier>EISSN: 1976-555X</identifier><identifier>DOI: 10.4142/jvs.2009.10.1.73</identifier><identifier>PMID: 19255527</identifier><language>eng</language><publisher>Korea (South): 대한수의학회</publisher><subject>Animals ; Barbari goats ; genetic characterization ; Genetic Variation ; Goats - genetics ; heterozygosity ; microsatellite markers ; Microsatellite Repeats - genetics ; Original ; POLIMORFISMO ; POLYMORPHISM ; POLYMORPHISME ; 수의학</subject><ispartof>Journal of Veterinary Science, 2009, 10(1), , pp.73-76</ispartof><rights>Copyright © 2009 The Korean Society of Veterinary Science 2009</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c479t-5ab7e813cbdcd04bbdcce4b35f103b17ea47620201bd0b95b4b853c8e3016e6b3</citedby><cites>FETCH-LOGICAL-c479t-5ab7e813cbdcd04bbdcce4b35f103b17ea47620201bd0b95b4b853c8e3016e6b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2801097/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2801097/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19255527$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART001328381$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><title>Genetic characterization of Barbari goats using microsatellite markers</title><title>Journal of veterinary science (Suwŏn-si, Korea)</title><addtitle>J Vet Sci</addtitle><description>Genetic variation in Barbari goats, a highly prolific breed distributed widely in the northern part of India, known for better milk and meat quality, was studied as a part of genetic characterization and conservation. The genomic DNA from 50 unrelated Barbari goats were amplified via PCR with a panel of 21 microsatellite markers, and resolved through 6 per cent denaturing polyacrylamide gel electrophoresis followed by silver staining. The number of alleles ranged from 4 to 11, with allele sizes ranging from 88 to 220 bp. The distribution of allele frequencies was between 0.0104 and 0.5208. Polymorphism information content varied from 0.5563 to 0.8348. The population was not in Hardy-Weinberg equilibrium for all except two microsatellite loci (ILSTS044 and ILSTS060). The observed heterozygosity ranged from 0.8478 to 1.0000 while the expected heterozygosity ranged from 0.6208 to 0.8509. Based on the results of the present study, there is a good scope for exploiting the genetic variability in the Barbari goats for further improvement of performance.</description><subject>Animals</subject><subject>Barbari goats</subject><subject>genetic characterization</subject><subject>Genetic Variation</subject><subject>Goats - genetics</subject><subject>heterozygosity</subject><subject>microsatellite markers</subject><subject>Microsatellite Repeats - genetics</subject><subject>Original</subject><subject>POLIMORFISMO</subject><subject>POLYMORPHISM</subject><subject>POLYMORPHISME</subject><subject>수의학</subject><issn>1229-845X</issn><issn>1976-555X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNpVkU1P3DAQhi3UCijtnUurXFr1kq0_4_hSifJVBCoSAombZTuTxexuTG0Hif76OuyK0tNYM887npkXoX2CZ5xw-u3-Mc0oxmpWEmQm2RbaJUo2tRDi9k15U6rqlovbHfQupXuMGRWN2kY7RNGCULmLTk5hgOxd5e5MNC5D9H9M9mGoQl_9MNGa6Kt5MDlVY_LDvFp5F0MyGZZLn6FambiAmN6jt71ZJviwiXvo5uT4-vBnfXF5enZ4cFE7LlWuhbESWsKc7VyHuS3BAbdM9AQzSyQYLhuKKSa2w1YJy20rmGuBYdJAY9ke-rruO8ReL5zXwfjnOA96EfXB1fWZpq1sFS3o9zX6MNoVdA6GHM1SP0RfZn56Fv5fGfxdafNY9JhgJUuDL5sGMfweIWW98smVvc0AYUy6aVRLCZlAvAany6QI_csnBOvJJ1180pNPU4JoyYrk0-vh_gk2xhTg82bRsZSg8-aF-XV5dEwIY60UonAf11xvgjbz6JM-vyr3w8VsxTj7C_15piM</recordid><startdate>20090301</startdate><enddate>20090301</enddate><creator>Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creator><creator>Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creator><creator>Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creator><creator>Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creator><general>대한수의학회</general><general>The Korean Society of Veterinary Science</general><scope>FBQ</scope><scope>DBRKI</scope><scope>TDB</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>ACYCR</scope></search><sort><creationdate>20090301</creationdate><title>Genetic characterization of Barbari goats using microsatellite markers</title><author>Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India ; Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India ; Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India ; Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c479t-5ab7e813cbdcd04bbdcce4b35f103b17ea47620201bd0b95b4b853c8e3016e6b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Animals</topic><topic>Barbari goats</topic><topic>genetic characterization</topic><topic>Genetic Variation</topic><topic>Goats - genetics</topic><topic>heterozygosity</topic><topic>microsatellite markers</topic><topic>Microsatellite Repeats - genetics</topic><topic>Original</topic><topic>POLIMORFISMO</topic><topic>POLYMORPHISM</topic><topic>POLYMORPHISME</topic><topic>수의학</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><creatorcontrib>Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</creatorcontrib><collection>AGRIS</collection><collection>DBPIA - 디비피아</collection><collection>Korean Database (DBpia)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Korean Citation Index</collection><jtitle>Journal of veterinary science (Suwŏn-si, Korea)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ramamoorthi, J., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</au><au>Thilagam, K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</au><au>Sivaselvam, S.N., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</au><au>Karthickeyan, S.M.K., Tamilnadu Veterinary and Animal Sciences University, Chennai, India</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic characterization of Barbari goats using microsatellite markers</atitle><jtitle>Journal of veterinary science (Suwŏn-si, Korea)</jtitle><addtitle>J Vet Sci</addtitle><date>2009-03-01</date><risdate>2009</risdate><volume>10</volume><issue>1</issue><spage>73</spage><epage>76</epage><pages>73-76</pages><issn>1229-845X</issn><eissn>1976-555X</eissn><abstract>Genetic variation in Barbari goats, a highly prolific breed distributed widely in the northern part of India, known for better milk and meat quality, was studied as a part of genetic characterization and conservation. The genomic DNA from 50 unrelated Barbari goats were amplified via PCR with a panel of 21 microsatellite markers, and resolved through 6 per cent denaturing polyacrylamide gel electrophoresis followed by silver staining. The number of alleles ranged from 4 to 11, with allele sizes ranging from 88 to 220 bp. The distribution of allele frequencies was between 0.0104 and 0.5208. Polymorphism information content varied from 0.5563 to 0.8348. The population was not in Hardy-Weinberg equilibrium for all except two microsatellite loci (ILSTS044 and ILSTS060). The observed heterozygosity ranged from 0.8478 to 1.0000 while the expected heterozygosity ranged from 0.6208 to 0.8509. Based on the results of the present study, there is a good scope for exploiting the genetic variability in the Barbari goats for further improvement of performance.</abstract><cop>Korea (South)</cop><pub>대한수의학회</pub><pmid>19255527</pmid><doi>10.4142/jvs.2009.10.1.73</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Barbari goats genetic characterization Genetic Variation Goats - genetics heterozygosity microsatellite markers Microsatellite Repeats - genetics Original POLIMORFISMO POLYMORPHISM POLYMORPHISME 수의학 |
title | Genetic characterization of Barbari goats using microsatellite markers |
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