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Expression of the Floral Repressor miRNA156 is Positively Regulated by the AGAMOUS-like Proteins AGL15 and AGL18
The regulation of flowering time has crucial implications for plant fitness. MicroRNA156 (miR156) represses the floral transition in Arabidopsis thaliana, but the mechanisms regulating its transcription remain unclear. Here, we show that two AGAMOUS-like proteins, AGL15 and AGL18, act as positive re...
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Published in: | Molecules and cells 2015, 38(3), , pp.259-266 |
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creator | Serivichyaswat, P., Korea University, Seoul, Republic of Korea Ryu, H.S., Korea University, Seoul, Republic of Korea Kim,W., Korea University, Seoul, Republic of Korea Kim, S., Korea University, Seoul, Republic of Korea Chung, K.S., Korea University, Seoul, Republic of Korea Kim, J.J., Korea University, Seoul, Republic of Korea Ahn, J.H., Korea University, Seoul, Republic of Korea |
description | The regulation of flowering time has crucial implications for plant fitness. MicroRNA156 (miR156) represses the floral transition in Arabidopsis thaliana, but the mechanisms regulating its transcription remain unclear. Here, we show that two AGAMOUS-like proteins, AGL15 and AGL18, act as positive regulators of the expression of MIR156. Small RNA northern blot analysis revealed a significant decrease in the levels of mature miR156 in agl15 agl18 double mutants, but not in the single mutants, suggesting that AGL15 and AGL18 co-regulate miR156 expression. Histochemical analysis further indicated that the double mutants showed a reduction in MIR156 promoter strength. The double mutants also showed reduced abundance of pri-miR156a and pri-miR156c, two of the primary transcripts from MIR156 genes. Electrophoretic mobility shift assays demonstrated that AGL15 directly associated with the CArG motifs in the MIR156a/c promoters. AGL18 did not show binding affinity to the CArG motifs, but pull-down and yeast two-hybrid assays showed that AGL18 forms a heterodimer with AGL15. GFP reporter assays and bimolecular fluorescence complementation (BiFC) showed that AGL15 and AGL18 co-localize in the nucleus and confirmed their in vivo interaction. Overexpression of miR156 did not affect the levels of AGL15 and AGL18 transcripts. Taking these data together, we present a model for the transcriptional regulation of MIR156. In this model, AGL15 and AGL18 may form a complex along with other proteins, and bind to the CArG motifs of the promoters of MIR156 to activate the MIR156 expression. |
doi_str_mv | 10.14348/molcells.2015.2311 |
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MicroRNA156 (miR156) represses the floral transition in Arabidopsis thaliana, but the mechanisms regulating its transcription remain unclear. Here, we show that two AGAMOUS-like proteins, AGL15 and AGL18, act as positive regulators of the expression of MIR156. Small RNA northern blot analysis revealed a significant decrease in the levels of mature miR156 in agl15 agl18 double mutants, but not in the single mutants, suggesting that AGL15 and AGL18 co-regulate miR156 expression. Histochemical analysis further indicated that the double mutants showed a reduction in MIR156 promoter strength. The double mutants also showed reduced abundance of pri-miR156a and pri-miR156c, two of the primary transcripts from MIR156 genes. Electrophoretic mobility shift assays demonstrated that AGL15 directly associated with the CArG motifs in the MIR156a/c promoters. AGL18 did not show binding affinity to the CArG motifs, but pull-down and yeast two-hybrid assays showed that AGL18 forms a heterodimer with AGL15. GFP reporter assays and bimolecular fluorescence complementation (BiFC) showed that AGL15 and AGL18 co-localize in the nucleus and confirmed their in vivo interaction. Overexpression of miR156 did not affect the levels of AGL15 and AGL18 transcripts. Taking these data together, we present a model for the transcriptional regulation of MIR156. In this model, AGL15 and AGL18 may form a complex along with other proteins, and bind to the CArG motifs of the promoters of MIR156 to activate the MIR156 expression.</description><identifier>ISSN: 1016-8478</identifier><identifier>EISSN: 0219-1032</identifier><identifier>DOI: 10.14348/molcells.2015.2311</identifier><identifier>PMID: 25666346</identifier><language>eng</language><publisher>United States: Korean Society for Molecular and Cellular Biology</publisher><subject>AGAMOUS-like 15,AGAMOUS-like 18,CArG motifs,floral transition,miRNA156 ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis Proteins - physiology ; Base Sequence ; FLORA ; FLORE ; Gene Expression Regulation, Plant ; MADS Domain Proteins - physiology ; MicroRNAs - genetics ; MicroRNAs - metabolism ; Promoter Regions, Genetic ; Protein Binding ; RNA Interference ; 생물학</subject><ispartof>Molecules and Cells, 2015, 38(3), , pp.259-266</ispartof><rights>The Korean Society for Molecular and Cellular Biology. All rights reserved. 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c525t-5850ac4a915205553dc6f4905c9e800e545e9123f616842ad522f5dc680d4d5b3</citedby><cites>FETCH-LOGICAL-c525t-5850ac4a915205553dc6f4905c9e800e545e9123f616842ad522f5dc680d4d5b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4363726/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4363726/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27923,27924,53790,53792</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25666346$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART001973462$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Serivichyaswat, P., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Ryu, H.S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim,W., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim, S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Chung, K.S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim, J.J., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Ahn, J.H., Korea University, Seoul, Republic of Korea</creatorcontrib><title>Expression of the Floral Repressor miRNA156 is Positively Regulated by the AGAMOUS-like Proteins AGL15 and AGL18</title><title>Molecules and cells</title><addtitle>Mol Cells</addtitle><description>The regulation of flowering time has crucial implications for plant fitness. MicroRNA156 (miR156) represses the floral transition in Arabidopsis thaliana, but the mechanisms regulating its transcription remain unclear. Here, we show that two AGAMOUS-like proteins, AGL15 and AGL18, act as positive regulators of the expression of MIR156. Small RNA northern blot analysis revealed a significant decrease in the levels of mature miR156 in agl15 agl18 double mutants, but not in the single mutants, suggesting that AGL15 and AGL18 co-regulate miR156 expression. Histochemical analysis further indicated that the double mutants showed a reduction in MIR156 promoter strength. The double mutants also showed reduced abundance of pri-miR156a and pri-miR156c, two of the primary transcripts from MIR156 genes. Electrophoretic mobility shift assays demonstrated that AGL15 directly associated with the CArG motifs in the MIR156a/c promoters. AGL18 did not show binding affinity to the CArG motifs, but pull-down and yeast two-hybrid assays showed that AGL18 forms a heterodimer with AGL15. GFP reporter assays and bimolecular fluorescence complementation (BiFC) showed that AGL15 and AGL18 co-localize in the nucleus and confirmed their in vivo interaction. Overexpression of miR156 did not affect the levels of AGL15 and AGL18 transcripts. Taking these data together, we present a model for the transcriptional regulation of MIR156. In this model, AGL15 and AGL18 may form a complex along with other proteins, and bind to the CArG motifs of the promoters of MIR156 to activate the MIR156 expression.</description><subject>AGAMOUS-like 15,AGAMOUS-like 18,CArG motifs,floral transition,miRNA156</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis Proteins - physiology</subject><subject>Base Sequence</subject><subject>FLORA</subject><subject>FLORE</subject><subject>Gene Expression Regulation, Plant</subject><subject>MADS Domain Proteins - physiology</subject><subject>MicroRNAs - genetics</subject><subject>MicroRNAs - metabolism</subject><subject>Promoter Regions, Genetic</subject><subject>Protein Binding</subject><subject>RNA Interference</subject><subject>생물학</subject><issn>1016-8478</issn><issn>0219-1032</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNpVkV1v0zAUhi0EYmXwCxDId3CT4mP7uMkNUjTtSxQ2le3achOnM03izk4n-u_nptsEV7Z8nve1rYeQj8CmIIXMv3W-rWzbxilngFMuAF6RCeNQZMAEf00mwEBluZzlR-RdjH8Yg5ni-VtyxFEpJaSakM3p302wMTrfU9_Q4c7Ss9YH09KFHQc-0M4tfpWAirpIr310g3uw7S4Bq21rBlvT5W4Mluflz6vb31nr1pZeBz9Y18d0Ogekpq_HXf6evGlMG-2Hp_WY3J6d3pxcZPOr88uTcp5VyHHIMEdmKmkKQM4QUdSVamTBsCpszphFibYALhoFKpfc1Mh5gwnKWS1rXIpj8uXQ24dGryunvXHjuvJ6HXS5uLnUM-BcJPL7gdxsl52tK9sP6f96E1xnwm7M_T_p3V1qedBSKDHjKhV8fSoI_n5r46A7F_dmTG_9NmpQCoFLQEioOKBV8DEG27xcA0yPVvWzVb23qvdWU-rzvy98yTxrTMCnA9AYr80quKh_LFJeMcYKDuIRh4Gmkw</recordid><startdate>20150301</startdate><enddate>20150301</enddate><creator>Serivichyaswat, P., Korea University, Seoul, Republic of Korea</creator><creator>Ryu, H.S., Korea University, Seoul, Republic of Korea</creator><creator>Kim,W., Korea University, Seoul, Republic of Korea</creator><creator>Kim, S., Korea University, Seoul, Republic of Korea</creator><creator>Chung, K.S., Korea University, Seoul, Republic of Korea</creator><creator>Kim, J.J., Korea University, Seoul, Republic of Korea</creator><creator>Ahn, J.H., Korea University, Seoul, Republic of Korea</creator><general>Korean Society for Molecular and Cellular Biology</general><general>한국분자세포생물학회</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>ACYCR</scope></search><sort><creationdate>20150301</creationdate><title>Expression of the Floral Repressor miRNA156 is Positively Regulated by the AGAMOUS-like Proteins AGL15 and AGL18</title><author>Serivichyaswat, P., Korea University, Seoul, Republic of Korea ; Ryu, H.S., Korea University, Seoul, Republic of Korea ; Kim,W., Korea University, Seoul, Republic of Korea ; Kim, S., Korea University, Seoul, Republic of Korea ; Chung, K.S., Korea University, Seoul, Republic of Korea ; Kim, J.J., Korea University, Seoul, Republic of Korea ; Ahn, J.H., Korea University, Seoul, Republic of Korea</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c525t-5850ac4a915205553dc6f4905c9e800e545e9123f616842ad522f5dc680d4d5b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>AGAMOUS-like 15,AGAMOUS-like 18,CArG motifs,floral transition,miRNA156</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - physiology</topic><topic>Base Sequence</topic><topic>FLORA</topic><topic>FLORE</topic><topic>Gene Expression Regulation, Plant</topic><topic>MADS Domain Proteins - physiology</topic><topic>MicroRNAs - genetics</topic><topic>MicroRNAs - metabolism</topic><topic>Promoter Regions, Genetic</topic><topic>Protein Binding</topic><topic>RNA Interference</topic><topic>생물학</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Serivichyaswat, P., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Ryu, H.S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim,W., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim, S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Chung, K.S., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Kim, J.J., Korea University, Seoul, Republic of Korea</creatorcontrib><creatorcontrib>Ahn, J.H., Korea University, Seoul, Republic of Korea</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Korean Citation Index</collection><jtitle>Molecules and cells</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Serivichyaswat, P., Korea University, Seoul, Republic of Korea</au><au>Ryu, H.S., Korea University, Seoul, Republic of Korea</au><au>Kim,W., Korea University, Seoul, Republic of Korea</au><au>Kim, S., Korea University, Seoul, Republic of Korea</au><au>Chung, K.S., Korea University, Seoul, Republic of Korea</au><au>Kim, J.J., Korea University, Seoul, Republic of Korea</au><au>Ahn, J.H., Korea University, Seoul, Republic of Korea</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression of the Floral Repressor miRNA156 is Positively Regulated by the AGAMOUS-like Proteins AGL15 and AGL18</atitle><jtitle>Molecules and cells</jtitle><addtitle>Mol Cells</addtitle><date>2015-03-01</date><risdate>2015</risdate><volume>38</volume><issue>3</issue><spage>259</spage><epage>266</epage><pages>259-266</pages><issn>1016-8478</issn><eissn>0219-1032</eissn><abstract>The regulation of flowering time has crucial implications for plant fitness. MicroRNA156 (miR156) represses the floral transition in Arabidopsis thaliana, but the mechanisms regulating its transcription remain unclear. Here, we show that two AGAMOUS-like proteins, AGL15 and AGL18, act as positive regulators of the expression of MIR156. Small RNA northern blot analysis revealed a significant decrease in the levels of mature miR156 in agl15 agl18 double mutants, but not in the single mutants, suggesting that AGL15 and AGL18 co-regulate miR156 expression. Histochemical analysis further indicated that the double mutants showed a reduction in MIR156 promoter strength. The double mutants also showed reduced abundance of pri-miR156a and pri-miR156c, two of the primary transcripts from MIR156 genes. Electrophoretic mobility shift assays demonstrated that AGL15 directly associated with the CArG motifs in the MIR156a/c promoters. AGL18 did not show binding affinity to the CArG motifs, but pull-down and yeast two-hybrid assays showed that AGL18 forms a heterodimer with AGL15. GFP reporter assays and bimolecular fluorescence complementation (BiFC) showed that AGL15 and AGL18 co-localize in the nucleus and confirmed their in vivo interaction. Overexpression of miR156 did not affect the levels of AGL15 and AGL18 transcripts. Taking these data together, we present a model for the transcriptional regulation of MIR156. In this model, AGL15 and AGL18 may form a complex along with other proteins, and bind to the CArG motifs of the promoters of MIR156 to activate the MIR156 expression.</abstract><cop>United States</cop><pub>Korean Society for Molecular and Cellular Biology</pub><pmid>25666346</pmid><doi>10.14348/molcells.2015.2311</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | AGAMOUS-like 15,AGAMOUS-like 18,CArG motifs,floral transition,miRNA156 Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis Proteins - physiology Base Sequence FLORA FLORE Gene Expression Regulation, Plant MADS Domain Proteins - physiology MicroRNAs - genetics MicroRNAs - metabolism Promoter Regions, Genetic Protein Binding RNA Interference 생물학 |
title | Expression of the Floral Repressor miRNA156 is Positively Regulated by the AGAMOUS-like Proteins AGL15 and AGL18 |
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