Loading…
Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders
The newly sequenced complete mitochondrial genome of the brown marmorated stink bug, Halyomorpha halys (Stal) (Hemiptera: Pentatomidae), is a circular molecule of 16,518 bp with a total A+T content of 76.4% and two extensive repeat regions in A+T rich region. Nucleotide composition and codon usage o...
Saved in:
Published in: | Molecules and cells 2009, 28(3), , pp.155-165 |
---|---|
Main Authors: | , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863 |
---|---|
cites | cdi_FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863 |
container_end_page | 165 |
container_issue | 3 |
container_start_page | 155 |
container_title | Molecules and cells |
container_volume | 28 |
creator | Lee, W.H. (Seoul National University, Seoul, Republic of Korea) Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea) Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea) Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA) Lee, S.H. (Seoul National University, Seoul, Republic of Korea) Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr |
description | The newly sequenced complete mitochondrial genome of the brown marmorated stink bug, Halyomorpha halys (Stal) (Hemiptera: Pentatomidae), is a circular molecule of 16,518 bp with a total A+T content of 76.4% and two extensive repeat regions in A+T rich region. Nucleotide composition and codon usage of H. halys are about average when compared with values observed in 19 other published hemipteran mitochondrial genomes. Phylogenetic analyses using these 20 hemipteran mitochondrial genomes support the currently accepted hypothesis that suborders Heteroptera and Auchenorrhyncha form a monophyletic group. The mitochondrial gene arrangements of the 20 genomes are also consistent with our results. |
doi_str_mv | 10.1007/s10059-009-0125-9 |
format | article |
fullrecord | <record><control><sourceid>proquest_nrf_k</sourceid><recordid>TN_cdi_nrf_kci_oai_kci_go_kr_ARTI_72415</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>860396442</sourcerecordid><originalsourceid>FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863</originalsourceid><addsrcrecordid>eNp9kc1u1DAUhSMEotPCA7AAWWwAiYDtJE7MrhoBU1EJVJW1dce5mbiT2KntCM3T9FXxMINGYsHCP7K_c67uPVn2gtEPjNL6Y0h7JXNK02K8yuWjbEE5kzmjBX-cLRhlIm_KujnLzkO4o5TVgjdPszMm60oUki6yh6UbpwEjktFEp3tnW29gIBu0bkTiOrL27pclI_jReYjYkhCN3ZL1vCErGHYuPU89kD7dA3m7wtFMET18Ij_QRohuNC3gu_cEbEumfje4ZI3RaOJxgGicDb2Zwr5S_1drSZjXzrfow7PsSQdDwOfH8yL7-eXz7XKVX3__erW8vM51KeqY14LKhkELstKyhSo12okOu0JrzhooNHBRlUyvOW8pFVjVFaBgZSmkZLQRxUX25uBrfae22igH5s-5cWrr1eXN7ZWqecmqEzl5dz9jiGo0QeMwgEU3B9UIWkhRljyRr_8h79zsbWpDcV4KVldUJogdIO1dCB47NXmTpr1TjKp9yuqQskopq33Kaq95dTSe1yO2J8Ux1gTwAxDSl92gP1X-n-vLg6gDp2DjTVDfbngCKC15GtFvP2O9Og</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>224617509</pqid></control><display><type>article</type><title>Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders</title><source>ScienceDirect Journals</source><creator>Lee, W.H. (Seoul National University, Seoul, Republic of Korea) ; Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</creator><creatorcontrib>Lee, W.H. (Seoul National University, Seoul, Republic of Korea) ; Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</creatorcontrib><description>The newly sequenced complete mitochondrial genome of the brown marmorated stink bug, Halyomorpha halys (Stal) (Hemiptera: Pentatomidae), is a circular molecule of 16,518 bp with a total A+T content of 76.4% and two extensive repeat regions in A+T rich region. Nucleotide composition and codon usage of H. halys are about average when compared with values observed in 19 other published hemipteran mitochondrial genomes. Phylogenetic analyses using these 20 hemipteran mitochondrial genomes support the currently accepted hypothesis that suborders Heteroptera and Auchenorrhyncha form a monophyletic group. The mitochondrial gene arrangements of the 20 genomes are also consistent with our results.</description><identifier>ISSN: 1016-8478</identifier><identifier>EISSN: 0219-1032</identifier><identifier>DOI: 10.1007/s10059-009-0125-9</identifier><identifier>PMID: 19756390</identifier><language>eng</language><publisher>Springer: Korean Society for Molecular and Cellular Biology</publisher><subject>Animals ; Base Sequence ; Biochemistry ; Biomedical and Life Sciences ; Biomedicine ; Biotechnology ; Cell Biology ; Codon - chemistry ; FILOGENIA ; Gene Order ; gene rearrangement ; Genome, Insect ; Genome, Mitochondrial ; Halyomorpha halys ; HEMIPTERA ; Hemiptera - classification ; Hemiptera - genetics ; Heteroptera - genetics ; Life Sciences ; mitochondrial genome ; Molecular Sequence Data ; PHYLOGENIE ; PHYLOGENY ; RNA, Transfer, Amino Acid-Specific - chemistry ; 생물학</subject><ispartof>Molecules and Cells, 2009, 28(3), , pp.155-165</ispartof><rights>The Korean Society for Molecular and Cellular Biology and Springer Netherlands 2009</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863</citedby><cites>FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19756390$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART001384596$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, W.H. (Seoul National University, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA)</creatorcontrib><creatorcontrib>Lee, S.H. (Seoul National University, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</creatorcontrib><title>Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders</title><title>Molecules and cells</title><addtitle>Mol Cells</addtitle><addtitle>Mol Cells</addtitle><description>The newly sequenced complete mitochondrial genome of the brown marmorated stink bug, Halyomorpha halys (Stal) (Hemiptera: Pentatomidae), is a circular molecule of 16,518 bp with a total A+T content of 76.4% and two extensive repeat regions in A+T rich region. Nucleotide composition and codon usage of H. halys are about average when compared with values observed in 19 other published hemipteran mitochondrial genomes. Phylogenetic analyses using these 20 hemipteran mitochondrial genomes support the currently accepted hypothesis that suborders Heteroptera and Auchenorrhyncha form a monophyletic group. The mitochondrial gene arrangements of the 20 genomes are also consistent with our results.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Codon - chemistry</subject><subject>FILOGENIA</subject><subject>Gene Order</subject><subject>gene rearrangement</subject><subject>Genome, Insect</subject><subject>Genome, Mitochondrial</subject><subject>Halyomorpha halys</subject><subject>HEMIPTERA</subject><subject>Hemiptera - classification</subject><subject>Hemiptera - genetics</subject><subject>Heteroptera - genetics</subject><subject>Life Sciences</subject><subject>mitochondrial genome</subject><subject>Molecular Sequence Data</subject><subject>PHYLOGENIE</subject><subject>PHYLOGENY</subject><subject>RNA, Transfer, Amino Acid-Specific - chemistry</subject><subject>생물학</subject><issn>1016-8478</issn><issn>0219-1032</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><recordid>eNp9kc1u1DAUhSMEotPCA7AAWWwAiYDtJE7MrhoBU1EJVJW1dce5mbiT2KntCM3T9FXxMINGYsHCP7K_c67uPVn2gtEPjNL6Y0h7JXNK02K8yuWjbEE5kzmjBX-cLRhlIm_KujnLzkO4o5TVgjdPszMm60oUki6yh6UbpwEjktFEp3tnW29gIBu0bkTiOrL27pclI_jReYjYkhCN3ZL1vCErGHYuPU89kD7dA3m7wtFMET18Ij_QRohuNC3gu_cEbEumfje4ZI3RaOJxgGicDb2Zwr5S_1drSZjXzrfow7PsSQdDwOfH8yL7-eXz7XKVX3__erW8vM51KeqY14LKhkELstKyhSo12okOu0JrzhooNHBRlUyvOW8pFVjVFaBgZSmkZLQRxUX25uBrfae22igH5s-5cWrr1eXN7ZWqecmqEzl5dz9jiGo0QeMwgEU3B9UIWkhRljyRr_8h79zsbWpDcV4KVldUJogdIO1dCB47NXmTpr1TjKp9yuqQskopq33Kaq95dTSe1yO2J8Ux1gTwAxDSl92gP1X-n-vLg6gDp2DjTVDfbngCKC15GtFvP2O9Og</recordid><startdate>20090901</startdate><enddate>20090901</enddate><creator>Lee, W.H. (Seoul National University, Seoul, Republic of Korea)</creator><creator>Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea)</creator><creator>Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea)</creator><creator>Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA)</creator><creator>Lee, S.H. (Seoul National University, Seoul, Republic of Korea)</creator><creator>Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</creator><general>Korean Society for Molecular and Cellular Biology</general><general>한국분자세포생물학회</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BVBZV</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>ACYCR</scope></search><sort><creationdate>20090901</creationdate><title>Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders</title><author>Lee, W.H. (Seoul National University, Seoul, Republic of Korea) ; Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea) ; Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea) ; Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Codon - chemistry</topic><topic>FILOGENIA</topic><topic>Gene Order</topic><topic>gene rearrangement</topic><topic>Genome, Insect</topic><topic>Genome, Mitochondrial</topic><topic>Halyomorpha halys</topic><topic>HEMIPTERA</topic><topic>Hemiptera - classification</topic><topic>Hemiptera - genetics</topic><topic>Heteroptera - genetics</topic><topic>Life Sciences</topic><topic>mitochondrial genome</topic><topic>Molecular Sequence Data</topic><topic>PHYLOGENIE</topic><topic>PHYLOGENY</topic><topic>RNA, Transfer, Amino Acid-Specific - chemistry</topic><topic>생물학</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, W.H. (Seoul National University, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA)</creatorcontrib><creatorcontrib>Lee, S.H. (Seoul National University, Seoul, Republic of Korea)</creatorcontrib><creatorcontrib>Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>Natural Science Collection</collection><collection>East & South Asia Database</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>Korean Citation Index</collection><jtitle>Molecules and cells</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, W.H. (Seoul National University, Seoul, Republic of Korea)</au><au>Kang, J.N. (Korea Forest Research Institute, Seoul, Republic of Korea)</au><au>Jung, C.S. (Korea Forest Research Institute, Seoul, Republic of Korea)</au><au>Kim, Hoelmer (USDA Agricultural Research Service, Beneficial Insect Introduction Research Laboratory, Newark, DE, USA)</au><au>Lee, S.H. (Seoul National University, Seoul, Republic of Korea)</au><au>Lee, S.H. (Seoul National University, Seoul, Republic of Korea), E-mail: seung@snu.ac.kr</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders</atitle><jtitle>Molecules and cells</jtitle><stitle>Mol Cells</stitle><addtitle>Mol Cells</addtitle><date>2009-09-01</date><risdate>2009</risdate><volume>28</volume><issue>3</issue><spage>155</spage><epage>165</epage><pages>155-165</pages><issn>1016-8478</issn><eissn>0219-1032</eissn><abstract>The newly sequenced complete mitochondrial genome of the brown marmorated stink bug, Halyomorpha halys (Stal) (Hemiptera: Pentatomidae), is a circular molecule of 16,518 bp with a total A+T content of 76.4% and two extensive repeat regions in A+T rich region. Nucleotide composition and codon usage of H. halys are about average when compared with values observed in 19 other published hemipteran mitochondrial genomes. Phylogenetic analyses using these 20 hemipteran mitochondrial genomes support the currently accepted hypothesis that suborders Heteroptera and Auchenorrhyncha form a monophyletic group. The mitochondrial gene arrangements of the 20 genomes are also consistent with our results.</abstract><cop>Springer</cop><pub>Korean Society for Molecular and Cellular Biology</pub><pmid>19756390</pmid><doi>10.1007/s10059-009-0125-9</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1016-8478 |
ispartof | Molecules and Cells, 2009, 28(3), , pp.155-165 |
issn | 1016-8478 0219-1032 |
language | eng |
recordid | cdi_nrf_kci_oai_kci_go_kr_ARTI_72415 |
source | ScienceDirect Journals |
subjects | Animals Base Sequence Biochemistry Biomedical and Life Sciences Biomedicine Biotechnology Cell Biology Codon - chemistry FILOGENIA Gene Order gene rearrangement Genome, Insect Genome, Mitochondrial Halyomorpha halys HEMIPTERA Hemiptera - classification Hemiptera - genetics Heteroptera - genetics Life Sciences mitochondrial genome Molecular Sequence Data PHYLOGENIE PHYLOGENY RNA, Transfer, Amino Acid-Specific - chemistry 생물학 |
title | Complete mitochondrial genome of brown marmorated stink bug Halyomorpha halys (Hemiptera: Pentatomidae), and phylogenetic relationships of hemipteran suborders |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-01T16%3A54%3A56IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_nrf_k&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Complete%20mitochondrial%20genome%20of%20brown%20marmorated%20stink%20bug%20Halyomorpha%20halys%20(Hemiptera:%20Pentatomidae),%20and%20phylogenetic%20relationships%20of%20hemipteran%20suborders&rft.jtitle=Molecules%20and%20cells&rft.au=Lee,%20W.H.%20(Seoul%20National%20University,%20Seoul,%20Republic%20of%20Korea)&rft.date=2009-09-01&rft.volume=28&rft.issue=3&rft.spage=155&rft.epage=165&rft.pages=155-165&rft.issn=1016-8478&rft.eissn=0219-1032&rft_id=info:doi/10.1007/s10059-009-0125-9&rft_dat=%3Cproquest_nrf_k%3E860396442%3C/proquest_nrf_k%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c467t-760981ada95c9da5176f6fef3cc218a3ca26541cb22d006e575ae614469910863%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=224617509&rft_id=info:pmid/19756390&rfr_iscdi=true |