Chitinibacter suncheonensis sp. nov., a Chitinolytic Bacterium from a Mud Flat in Suncheon Bay

A chitinolytic bacterium, designated strain SK16∨T, was isolated from a mud flat in Suncheon Bay, Republic of Korea. Strain SK16∨T is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belo...

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Published in:The journal of microbiology 2012, 50(6), , pp.1058-1062
Main Authors: Kim, S.K., Sunchon National University, Sunchon, Republic of Korea, Kim, Y.H., Sunchon National University, Sunchon, Republic of Korea, Jeong, Y.S., Sunchon National University, Sunchon, Republic of Korea, Na, H.B., Sunchon National University, Sunchon, Republic of Korea, Kim, J.H., Sunchon National University, Sunchon, Republic of Korea, Baik, K.S., Sunchon National University, Sunchon, Republic of Korea, Yun, H.D., Gyeongsang National University, Jinju, Republic of Korea, Lee, J.K., Konkuk University, Seoul, Republic of Korea, Kim, H., Sunchon National University, Sunchon, Republic of Korea
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Language:English
Subjects:
Bacteria
Biomedical and Life Sciences
Chitinibacter suncheonensis sp. nov
chitinolytic activity
Deoxyribonucleic acid
DNA
Fatty Acids - chemistry
Life Sciences
Microbiology
Molecular Sequence Data
mud flat
Mud flats
Neisseriaceae - chemistry
Neisseriaceae - classification
Neisseriaceae - genetics
Neisseriaceae - isolation & purification
Phenotype
Phylogenetics
Phylogeny
Republic of Korea
RNA, Ribosomal, 16S
Soil Microbiology
TAXONOMIA
TAXONOMIE
TAXONOMY
Trees
생물학
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cited_by cdi_FETCH-LOGICAL-c460t-a9d3a8ea866dc9a189550bf98b5fdc13c82f3c2d5147226a0b82ecc134958b0b3
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creator Kim, S.K., Sunchon National University, Sunchon, Republic of Korea
Kim, Y.H., Sunchon National University, Sunchon, Republic of Korea
Jeong, Y.S., Sunchon National University, Sunchon, Republic of Korea
Na, H.B., Sunchon National University, Sunchon, Republic of Korea
Kim, J.H., Sunchon National University, Sunchon, Republic of Korea
Baik, K.S., Sunchon National University, Sunchon, Republic of Korea
Yun, H.D., Gyeongsang National University, Jinju, Republic of Korea
Lee, J.K., Konkuk University, Seoul, Republic of Korea
Kim, H., Sunchon National University, Sunchon, Republic of Korea
description A chitinolytic bacterium, designated strain SK16∨T, was isolated from a mud flat in Suncheon Bay, Republic of Korea. Strain SK16∨T is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belonged to the genus Chitinibacter and was most closely related to Chitinibacter tainanensis S1∨T (98.2% similarity). DNA-DNA hybridization analyses showed a low association value of 20.45±4.08% between them. The major cellular fatty acids, the G+C content of the genomic DNA, and the predominant quinone of the strain were summed feature 3 (iso-C∧15:0 2-OH and/or C∧16:1 ω7c; 50.5%) and C∧12:0 (12.5%), 52.26 mol%, and Q-8, respectively. Based on the phylogenetic, chemotaxonomic, and phenotypic properties, strain SK16∨T represents a novel species of the genus Chitinibacter, for which the name Chitinibacter suncheonensis sp. nov. is proposed. The type strain is SK16∨T (=KCTC 23839∨T =DSM 25421∨T).
doi_str_mv 10.1007/s12275-012-2333-9
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Strain SK16∨T is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belonged to the genus Chitinibacter and was most closely related to Chitinibacter tainanensis S1∨T (98.2% similarity). DNA-DNA hybridization analyses showed a low association value of 20.45±4.08% between them. The major cellular fatty acids, the G+C content of the genomic DNA, and the predominant quinone of the strain were summed feature 3 (iso-C∧15:0 2-OH and/or C∧16:1 ω7c; 50.5%) and C∧12:0 (12.5%), 52.26 mol%, and Q-8, respectively. Based on the phylogenetic, chemotaxonomic, and phenotypic properties, strain SK16∨T represents a novel species of the genus Chitinibacter, for which the name Chitinibacter suncheonensis sp. nov. is proposed. 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Strain SK16∨T is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belonged to the genus Chitinibacter and was most closely related to Chitinibacter tainanensis S1∨T (98.2% similarity). DNA-DNA hybridization analyses showed a low association value of 20.45±4.08% between them. The major cellular fatty acids, the G+C content of the genomic DNA, and the predominant quinone of the strain were summed feature 3 (iso-C∧15:0 2-OH and/or C∧16:1 ω7c; 50.5%) and C∧12:0 (12.5%), 52.26 mol%, and Q-8, respectively. Based on the phylogenetic, chemotaxonomic, and phenotypic properties, strain SK16∨T represents a novel species of the genus Chitinibacter, for which the name Chitinibacter suncheonensis sp. nov. is proposed. 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Strain SK16∨T is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belonged to the genus Chitinibacter and was most closely related to Chitinibacter tainanensis S1∨T (98.2% similarity). DNA-DNA hybridization analyses showed a low association value of 20.45±4.08% between them. The major cellular fatty acids, the G+C content of the genomic DNA, and the predominant quinone of the strain were summed feature 3 (iso-C∧15:0 2-OH and/or C∧16:1 ω7c; 50.5%) and C∧12:0 (12.5%), 52.26 mol%, and Q-8, respectively. Based on the phylogenetic, chemotaxonomic, and phenotypic properties, strain SK16∨T represents a novel species of the genus Chitinibacter, for which the name Chitinibacter suncheonensis sp. nov. is proposed. The type strain is SK16∨T (=KCTC 23839∨T =DSM 25421∨T).</abstract><cop>Heidelberg</cop><pub>The Microbiological Society of Korea</pub><pmid>23274996</pmid><doi>10.1007/s12275-012-2333-9</doi><tpages>5</tpages></addata></record>
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identifier ISSN: 1225-8873
ispartof The Journal of Microbiology, 2012, 50(6), , pp.1058-1062
issn 1225-8873
1976-3794
language eng
recordid cdi_nrf_kci_oai_kci_go_kr_ARTI_817121
source Springer Nature
subjects Bacteria
Biomedical and Life Sciences
Chitinibacter suncheonensis sp. nov
chitinolytic activity
Deoxyribonucleic acid
DNA
Fatty Acids - chemistry
Life Sciences
Microbiology
Molecular Sequence Data
mud flat
Mud flats
Neisseriaceae - chemistry
Neisseriaceae - classification
Neisseriaceae - genetics
Neisseriaceae - isolation & purification
Phenotype
Phylogenetics
Phylogeny
Republic of Korea
RNA, Ribosomal, 16S
Soil Microbiology
TAXONOMIA
TAXONOMIE
TAXONOMY
Trees
생물학
title Chitinibacter suncheonensis sp. nov., a Chitinolytic Bacterium from a Mud Flat in Suncheon Bay
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