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Deep Learning Algorithm for Automated Segmentation and Volume Measurement of the Liver and Spleen Using Portal Venous Phase Computed Tomography Images
Objective Measurement of the liver and spleen volumes has clinical implications. Although computed tomography (CT) volumetry is considered to be the most reliable noninvasive method for liver and spleen volume measurement, it has limited application in clinical practice due to its time-consuming seg...
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Published in: | Korean journal of radiology 2020, 21(8), , pp.987-997 |
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description | Objective Measurement of the liver and spleen volumes has clinical implications. Although computed tomography (CT) volumetry is considered to be the most reliable noninvasive method for liver and spleen volume measurement, it has limited application in clinical practice due to its time-consuming segmentation process. We aimed to develop and validate a deep learning algorithm (DLA) for fully automated liver and spleen segmentation using portal venous phase CT images in various liver conditions. Materials and Methods A DLA for liver and spleen segmentation was trained using a development dataset of portal venous CT images from 813 patients. Performance of the DLA was evaluated in two separate test datasets: dataset-1 which included 150 CT examinations in patients with various liver conditions (i.e., healthy liver, fatty liver, chronic liver disease, cirrhosis, and post-hepatectomy) and dataset-2 which included 50 pairs of CT examinations performed at ours and other institutions. The performance of the DLA was evaluated using the dice similarity score (DSS) for segmentation and Bland-Altman 95% limits of agreement (LOA) for measurement of the volumetric indices, which was compared with that of ground truth manual segmentation. Results In test dataset-1, the DLA achieved a mean DSS of 0.973 and 0.974 for liver and spleen segmentation, respectively, with no significant difference in DSS across different liver conditions (p = 0.60 and 0.26 for the liver and spleen, respectively). For the measurement of volumetric indices, the Bland-Altman 95% LOA was −0.17 ± 3.07% for liver volume and −0.56 ± 3.78% for spleen volume. In test dataset-2, DLA performance using CT images obtained at outside institutions and our institution was comparable for liver (DSS, 0.982 vs. 0.983; p = 0.28) and spleen (DSS, 0.969 vs. 0.968; p = 0.41) segmentation. Conclusion The DLA enabled highly accurate segmentation and volume measurement of the liver and spleen using portal venous phase CT images of patients with various liver conditions. |
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Although computed tomography (CT) volumetry is considered to be the most reliable noninvasive method for liver and spleen volume measurement, it has limited application in clinical practice due to its time-consuming segmentation process. We aimed to develop and validate a deep learning algorithm (DLA) for fully automated liver and spleen segmentation using portal venous phase CT images in various liver conditions. Materials and Methods A DLA for liver and spleen segmentation was trained using a development dataset of portal venous CT images from 813 patients. Performance of the DLA was evaluated in two separate test datasets: dataset-1 which included 150 CT examinations in patients with various liver conditions (i.e., healthy liver, fatty liver, chronic liver disease, cirrhosis, and post-hepatectomy) and dataset-2 which included 50 pairs of CT examinations performed at ours and other institutions. The performance of the DLA was evaluated using the dice similarity score (DSS) for segmentation and Bland-Altman 95% limits of agreement (LOA) for measurement of the volumetric indices, which was compared with that of ground truth manual segmentation. Results In test dataset-1, the DLA achieved a mean DSS of 0.973 and 0.974 for liver and spleen segmentation, respectively, with no significant difference in DSS across different liver conditions (p = 0.60 and 0.26 for the liver and spleen, respectively). For the measurement of volumetric indices, the Bland-Altman 95% LOA was −0.17 ± 3.07% for liver volume and −0.56 ± 3.78% for spleen volume. In test dataset-2, DLA performance using CT images obtained at outside institutions and our institution was comparable for liver (DSS, 0.982 vs. 0.983; p = 0.28) and spleen (DSS, 0.969 vs. 0.968; p = 0.41) segmentation. Conclusion The DLA enabled highly accurate segmentation and volume measurement of the liver and spleen using portal venous phase CT images of patients with various liver conditions.</description><identifier>ISSN: 1229-6929</identifier><identifier>EISSN: 2005-8330</identifier><identifier>DOI: 10.3348/kjr.2020.0237</identifier><identifier>PMID: 32677383</identifier><language>eng</language><publisher>Seoul: The Korean Society of Radiology</publisher><subject>Algorithms ; Automation ; Clinical medicine ; Datasets ; Deep learning ; Gastrointestinal Imaging ; Liver cirrhosis ; Liver diseases ; Medical imaging ; Software ; Spleen ; Tomography ; 방사선과학</subject><ispartof>Korean Journal of Radiology, 2020, 21(8), , pp.987-997</ispartof><rights>2020. This work is published under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2020 The Korean Society of Radiology 2020 The Korean Society of Radiology</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-b15879b350cddcba2e11cdd0be68cec962ea981dbdae539076e10be5a1eec2613</citedby><cites>FETCH-LOGICAL-c426t-b15879b350cddcba2e11cdd0be68cec962ea981dbdae539076e10be5a1eec2613</cites><orcidid>0000-0001-7019-8962 ; 0000-0002-9477-7421 ; 0000-0002-9188-1186 ; 0000-0003-0721-504X ; 0000-0002-5518-2249 ; 0000-0002-9557-5848</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2728155734/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2728155734?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.kci.go.kr/kciportal/ci/sereArticleSearch/ciSereArtiView.kci?sereArticleSearchBean.artiId=ART002610573$$DAccess content in National Research Foundation of Korea (NRF)$$Hfree_for_read</backlink></links><search><creatorcontrib>Ahn, Yura</creatorcontrib><creatorcontrib>Yoon, Jee Seok</creatorcontrib><creatorcontrib>Lee, Seung Soo</creatorcontrib><creatorcontrib>Suk, Heung-Il</creatorcontrib><creatorcontrib>Son, Jung Hee</creatorcontrib><creatorcontrib>Sung, Yu Sub</creatorcontrib><creatorcontrib>Lee, Yedaun</creatorcontrib><creatorcontrib>Kang, Bo-Kyeong</creatorcontrib><creatorcontrib>Kim, Ho Sung</creatorcontrib><title>Deep Learning Algorithm for Automated Segmentation and Volume Measurement of the Liver and Spleen Using Portal Venous Phase Computed Tomography Images</title><title>Korean journal of radiology</title><description>Objective Measurement of the liver and spleen volumes has clinical implications. Although computed tomography (CT) volumetry is considered to be the most reliable noninvasive method for liver and spleen volume measurement, it has limited application in clinical practice due to its time-consuming segmentation process. We aimed to develop and validate a deep learning algorithm (DLA) for fully automated liver and spleen segmentation using portal venous phase CT images in various liver conditions. Materials and Methods A DLA for liver and spleen segmentation was trained using a development dataset of portal venous CT images from 813 patients. Performance of the DLA was evaluated in two separate test datasets: dataset-1 which included 150 CT examinations in patients with various liver conditions (i.e., healthy liver, fatty liver, chronic liver disease, cirrhosis, and post-hepatectomy) and dataset-2 which included 50 pairs of CT examinations performed at ours and other institutions. The performance of the DLA was evaluated using the dice similarity score (DSS) for segmentation and Bland-Altman 95% limits of agreement (LOA) for measurement of the volumetric indices, which was compared with that of ground truth manual segmentation. Results In test dataset-1, the DLA achieved a mean DSS of 0.973 and 0.974 for liver and spleen segmentation, respectively, with no significant difference in DSS across different liver conditions (p = 0.60 and 0.26 for the liver and spleen, respectively). For the measurement of volumetric indices, the Bland-Altman 95% LOA was −0.17 ± 3.07% for liver volume and −0.56 ± 3.78% for spleen volume. In test dataset-2, DLA performance using CT images obtained at outside institutions and our institution was comparable for liver (DSS, 0.982 vs. 0.983; p = 0.28) and spleen (DSS, 0.969 vs. 0.968; p = 0.41) segmentation. Conclusion The DLA enabled highly accurate segmentation and volume measurement of the liver and spleen using portal venous phase CT images of patients with various liver conditions.</description><subject>Algorithms</subject><subject>Automation</subject><subject>Clinical medicine</subject><subject>Datasets</subject><subject>Deep learning</subject><subject>Gastrointestinal Imaging</subject><subject>Liver cirrhosis</subject><subject>Liver diseases</subject><subject>Medical imaging</subject><subject>Software</subject><subject>Spleen</subject><subject>Tomography</subject><subject>방사선과학</subject><issn>1229-6929</issn><issn>2005-8330</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><recordid>eNpdkkuP0zAUhS0EYkphyd4SG1ik-JGXN0hVeVUqYsR0Zms5zk2aNrYzdjLS_BF-L047QoLVvdL5fHR970HoLSUrztPy4-noV4wwsiKMF8_QghGSJSXn5DlaUMZEkgsmrtCrEI6EMEHK9CW64iwvCl7yBfr9GWDAO1DedrbF6751vhsPBjfO4_U0OqNGqPENtAbsqMbOWaxsje9cPxnAP0CFycOsYdfg8QB41z2APzM3Qw9g8W2Yna-dH1WP78C6KeDrgwqAN84M02y_d8a1Xg2HR7w1qoXwGr1oVB_gzVNdotuvX_ab78nu57ftZr1LdMryMaloVhai4hnRda0rxYDS2JEK8lKDFjkDJUpaV7WCjAtS5ECjmCkKoFlO-RJ9uPha38iT7qRT3bm2Tp68XP_ab6XIUk7LPLKfLuwwVQZqHf_sVS8H3xnlH88v_1Vsd4g-D7Lg8QbxPEv0_snAu_sJwihNFzT0vbIQlyJZyjJCKGUiou_-Q49u8jauQrKClTTLCp5GKrlQ2rsQPDR_h6FEzumQMR1yToec08H_ALa8rwU</recordid><startdate>20200801</startdate><enddate>20200801</enddate><creator>Ahn, Yura</creator><creator>Yoon, Jee Seok</creator><creator>Lee, Seung Soo</creator><creator>Suk, Heung-Il</creator><creator>Son, Jung Hee</creator><creator>Sung, Yu Sub</creator><creator>Lee, Yedaun</creator><creator>Kang, Bo-Kyeong</creator><creator>Kim, Ho Sung</creator><general>The Korean Society of Radiology</general><general>대한영상의학회</general><scope>AAYXX</scope><scope>CITATION</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>ACYCR</scope><orcidid>https://orcid.org/0000-0001-7019-8962</orcidid><orcidid>https://orcid.org/0000-0002-9477-7421</orcidid><orcidid>https://orcid.org/0000-0002-9188-1186</orcidid><orcidid>https://orcid.org/0000-0003-0721-504X</orcidid><orcidid>https://orcid.org/0000-0002-5518-2249</orcidid><orcidid>https://orcid.org/0000-0002-9557-5848</orcidid></search><sort><creationdate>20200801</creationdate><title>Deep Learning Algorithm for Automated Segmentation and Volume Measurement of the Liver and Spleen Using Portal Venous Phase Computed Tomography Images</title><author>Ahn, Yura ; Yoon, Jee Seok ; Lee, Seung Soo ; Suk, Heung-Il ; Son, Jung Hee ; Sung, Yu Sub ; Lee, Yedaun ; Kang, Bo-Kyeong ; Kim, Ho Sung</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-b15879b350cddcba2e11cdd0be68cec962ea981dbdae539076e10be5a1eec2613</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Algorithms</topic><topic>Automation</topic><topic>Clinical medicine</topic><topic>Datasets</topic><topic>Deep learning</topic><topic>Gastrointestinal Imaging</topic><topic>Liver cirrhosis</topic><topic>Liver diseases</topic><topic>Medical imaging</topic><topic>Software</topic><topic>Spleen</topic><topic>Tomography</topic><topic>방사선과학</topic><toplevel>online_resources</toplevel><creatorcontrib>Ahn, Yura</creatorcontrib><creatorcontrib>Yoon, Jee Seok</creatorcontrib><creatorcontrib>Lee, Seung Soo</creatorcontrib><creatorcontrib>Suk, Heung-Il</creatorcontrib><creatorcontrib>Son, Jung Hee</creatorcontrib><creatorcontrib>Sung, Yu Sub</creatorcontrib><creatorcontrib>Lee, Yedaun</creatorcontrib><creatorcontrib>Kang, Bo-Kyeong</creatorcontrib><creatorcontrib>Kim, Ho Sung</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Publicly Available Content Database (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Korean Citation Index</collection><jtitle>Korean journal of radiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ahn, Yura</au><au>Yoon, Jee Seok</au><au>Lee, Seung Soo</au><au>Suk, Heung-Il</au><au>Son, Jung Hee</au><au>Sung, Yu Sub</au><au>Lee, Yedaun</au><au>Kang, Bo-Kyeong</au><au>Kim, Ho Sung</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Deep Learning Algorithm for Automated Segmentation and Volume Measurement of the Liver and Spleen Using Portal Venous Phase Computed Tomography Images</atitle><jtitle>Korean journal of radiology</jtitle><date>2020-08-01</date><risdate>2020</risdate><volume>21</volume><issue>8</issue><spage>987</spage><epage>997</epage><pages>987-997</pages><issn>1229-6929</issn><eissn>2005-8330</eissn><abstract>Objective Measurement of the liver and spleen volumes has clinical implications. Although computed tomography (CT) volumetry is considered to be the most reliable noninvasive method for liver and spleen volume measurement, it has limited application in clinical practice due to its time-consuming segmentation process. We aimed to develop and validate a deep learning algorithm (DLA) for fully automated liver and spleen segmentation using portal venous phase CT images in various liver conditions. Materials and Methods A DLA for liver and spleen segmentation was trained using a development dataset of portal venous CT images from 813 patients. Performance of the DLA was evaluated in two separate test datasets: dataset-1 which included 150 CT examinations in patients with various liver conditions (i.e., healthy liver, fatty liver, chronic liver disease, cirrhosis, and post-hepatectomy) and dataset-2 which included 50 pairs of CT examinations performed at ours and other institutions. The performance of the DLA was evaluated using the dice similarity score (DSS) for segmentation and Bland-Altman 95% limits of agreement (LOA) for measurement of the volumetric indices, which was compared with that of ground truth manual segmentation. Results In test dataset-1, the DLA achieved a mean DSS of 0.973 and 0.974 for liver and spleen segmentation, respectively, with no significant difference in DSS across different liver conditions (p = 0.60 and 0.26 for the liver and spleen, respectively). For the measurement of volumetric indices, the Bland-Altman 95% LOA was −0.17 ± 3.07% for liver volume and −0.56 ± 3.78% for spleen volume. In test dataset-2, DLA performance using CT images obtained at outside institutions and our institution was comparable for liver (DSS, 0.982 vs. 0.983; p = 0.28) and spleen (DSS, 0.969 vs. 0.968; p = 0.41) segmentation. Conclusion The DLA enabled highly accurate segmentation and volume measurement of the liver and spleen using portal venous phase CT images of patients with various liver conditions.</abstract><cop>Seoul</cop><pub>The Korean Society of Radiology</pub><pmid>32677383</pmid><doi>10.3348/kjr.2020.0237</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0001-7019-8962</orcidid><orcidid>https://orcid.org/0000-0002-9477-7421</orcidid><orcidid>https://orcid.org/0000-0002-9188-1186</orcidid><orcidid>https://orcid.org/0000-0003-0721-504X</orcidid><orcidid>https://orcid.org/0000-0002-5518-2249</orcidid><orcidid>https://orcid.org/0000-0002-9557-5848</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Algorithms Automation Clinical medicine Datasets Deep learning Gastrointestinal Imaging Liver cirrhosis Liver diseases Medical imaging Software Spleen Tomography 방사선과학 |
title | Deep Learning Algorithm for Automated Segmentation and Volume Measurement of the Liver and Spleen Using Portal Venous Phase Computed Tomography Images |
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