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Zooming in on disordered systems: Neutron reflection studies of proteins associated with fluid membranes
Neutron reflectometry (NR) is an emerging experimental technique for the structural characterization of proteins interacting with fluid bilayer membranes under conditions that mimic closely the cellular environment. Thus, cellular processes can be emulated in artificial systems and their molecular b...
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Published in: | Biochimica et biophysica acta 2014-09, Vol.1838 (9), p.2341-2349 |
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description | Neutron reflectometry (NR) is an emerging experimental technique for the structural characterization of proteins interacting with fluid bilayer membranes under conditions that mimic closely the cellular environment. Thus, cellular processes can be emulated in artificial systems and their molecular basis studied by adding cellular components one at a time in a well-controlled environment while the resulting structures, or structural changes in response to external cues, are monitored with neutron reflection. In recent years, sample environments, data collection strategies and data analysis were continuously refined. The combination of these improvements increases the information which can be obtained from NR to an extent that enables structural characterization of protein–membrane complexes at a length scale that exceeds the resolution of the measurement by far. Ultimately, the combination of NR with molecular dynamics (MD) simulations can be used to cross-validate the results of the two techniques and provide atomic-scale structural models. This review discusses these developments in detail and demonstrates how they provide new windows into relevant biomedical problems. This article is part of a Special Issue entitled: Interfacially Active Peptides and Proteins. Guest Editors: William C. Wimley and Kalina Hristova.
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•Neutron reflection: a new tool for structural biology of membrane-associated proteins•Proteins characterized on fluid membranes, and disordered protein segments located•Advanced modeling and rigorous error analysis increase deduced information.•Protein membrane penetration determined with 5Å precision, 1Å for crystal structure•Orientation of proteins with known internal structure determined with high precision |
doi_str_mv | 10.1016/j.bbamem.2014.03.007 |
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[Display omitted]
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[Display omitted]
•Neutron reflection: a new tool for structural biology of membrane-associated proteins•Proteins characterized on fluid membranes, and disordered protein segments located•Advanced modeling and rigorous error analysis increase deduced information.•Protein membrane penetration determined with 5Å precision, 1Å for crystal structure•Orientation of proteins with known internal structure determined with high precision</description><subject>Composition-space modeling</subject><subject>Humans</subject><subject>Lipid Bilayers - chemistry</subject><subject>MD simulation</subject><subject>Membrane protein</subject><subject>Membrane Proteins - chemistry</subject><subject>Membrane structure</subject><subject>Models, Molecular</subject><subject>Molecular Dynamics Simulation</subject><subject>Neutrons</subject><subject>Peptides - chemistry</subject><subject>Protein Structure, Secondary</subject><subject>Scattering techniques</subject><issn>0005-2736</issn><issn>0006-3002</issn><issn>1879-2642</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><recordid>eNp9UU1v1DAUtBCILoV_gJDFiUuCPxMvB6Sq4kuq4AIXLpbjvHS9SuzFzynqv8erLQUunGzpzcybeUPIc85aznj3et8Og1tgaQXjqmWyZax_QDbc9NtGdEo8JBvGmG5EL7sz8gRxzypNCf2YnAnV9Wpr1Ibsvqe0hHhNQ6Qp0jFgyiNkGCneYoEF39DPsJZcZxmmGXwJ9YtlHQMgTRM95FQgRKQOMfngSqX-DGVHp3kNI60Gh-wi4FPyaHIzwrO795x8e__u6-XH5urLh0-XF1eN1x0rjRBeCSOkg05rJRUftICpV2zgTgoptkKqwWvm1Wik8YZ5x50RCtigFee9PCdvT7qHdVhg9BBLdrM95LC4fGuTC_bfSQw7e51urGJG9JpVgZcngYQlWPShgN_5FGPNbrngUm9NBb2625LTjxWw2CWgh3muUdOKlmvNjdgqoSpUnaA-J8R6xHsvnNljk3ZvT03aY5OWSVubrLQXf-e4J_2u7k9QqNe8CZCPXiF6GEM-Wh1T-P-GX8Gnsm8</recordid><startdate>20140901</startdate><enddate>20140901</enddate><creator>Heinrich, Frank</creator><creator>Lösche, Mathias</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OTOTI</scope><scope>5PM</scope></search><sort><creationdate>20140901</creationdate><title>Zooming in on disordered systems: Neutron reflection studies of proteins associated with fluid membranes</title><author>Heinrich, Frank ; Lösche, Mathias</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c560t-22c42823ae6554341b52ef740b1a32329234bc50c4d838c80ca1a824e0b541173</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Composition-space modeling</topic><topic>Humans</topic><topic>Lipid Bilayers - chemistry</topic><topic>MD simulation</topic><topic>Membrane protein</topic><topic>Membrane Proteins - chemistry</topic><topic>Membrane structure</topic><topic>Models, Molecular</topic><topic>Molecular Dynamics Simulation</topic><topic>Neutrons</topic><topic>Peptides - chemistry</topic><topic>Protein Structure, Secondary</topic><topic>Scattering techniques</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Heinrich, Frank</creatorcontrib><creatorcontrib>Lösche, Mathias</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Biochimica et biophysica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Heinrich, Frank</au><au>Lösche, Mathias</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Zooming in on disordered systems: Neutron reflection studies of proteins associated with fluid membranes</atitle><jtitle>Biochimica et biophysica acta</jtitle><addtitle>Biochim Biophys Acta</addtitle><date>2014-09-01</date><risdate>2014</risdate><volume>1838</volume><issue>9</issue><spage>2341</spage><epage>2349</epage><pages>2341-2349</pages><issn>0005-2736</issn><issn>0006-3002</issn><eissn>1879-2642</eissn><abstract>Neutron reflectometry (NR) is an emerging experimental technique for the structural characterization of proteins interacting with fluid bilayer membranes under conditions that mimic closely the cellular environment. Thus, cellular processes can be emulated in artificial systems and their molecular basis studied by adding cellular components one at a time in a well-controlled environment while the resulting structures, or structural changes in response to external cues, are monitored with neutron reflection. In recent years, sample environments, data collection strategies and data analysis were continuously refined. The combination of these improvements increases the information which can be obtained from NR to an extent that enables structural characterization of protein–membrane complexes at a length scale that exceeds the resolution of the measurement by far. Ultimately, the combination of NR with molecular dynamics (MD) simulations can be used to cross-validate the results of the two techniques and provide atomic-scale structural models. This review discusses these developments in detail and demonstrates how they provide new windows into relevant biomedical problems. This article is part of a Special Issue entitled: Interfacially Active Peptides and Proteins. Guest Editors: William C. Wimley and Kalina Hristova.
[Display omitted]
•Neutron reflection: a new tool for structural biology of membrane-associated proteins•Proteins characterized on fluid membranes, and disordered protein segments located•Advanced modeling and rigorous error analysis increase deduced information.•Protein membrane penetration determined with 5Å precision, 1Å for crystal structure•Orientation of proteins with known internal structure determined with high precision</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>24674984</pmid><doi>10.1016/j.bbamem.2014.03.007</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Composition-space modeling Humans Lipid Bilayers - chemistry MD simulation Membrane protein Membrane Proteins - chemistry Membrane structure Models, Molecular Molecular Dynamics Simulation Neutrons Peptides - chemistry Protein Structure, Secondary Scattering techniques |
title | Zooming in on disordered systems: Neutron reflection studies of proteins associated with fluid membranes |
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