Loading…
Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation
The genus Aspergillus is ubiquitous in nature and includes various species extensively exploited industrially due to their ability to produce and secrete a variety of enzymes and metabolites. Most processes are performed in submerged fermentation (SmF); however, solid-state fermentation (SSF) offers...
Saved in:
Published in: | Journal of proteome research 2016-10, Vol.15 (10), p.3856-3871 |
---|---|
Main Authors: | , , , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123 |
---|---|
cites | cdi_FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123 |
container_end_page | 3871 |
container_issue | 10 |
container_start_page | 3856 |
container_title | Journal of proteome research |
container_volume | 15 |
creator | Volke-Sepulveda, Tania Salgado-Bautista, Daniel Bergmann, Carl Wells, Lance Gutierrez-Sanchez, Gerardo Favela-Torres, Ernesto |
description | The genus Aspergillus is ubiquitous in nature and includes various species extensively exploited industrially due to their ability to produce and secrete a variety of enzymes and metabolites. Most processes are performed in submerged fermentation (SmF); however, solid-state fermentation (SSF) offers several advantages, including lower catabolite repression and substrate inhibition and higher productivity and stability of the enzymes produced. This study aimed to explain the improved metabolic behavior of A. brasiliensis ATCC9642 in SSF at high glucose concentrations through a proteomic approach. Online respirometric analysis provided reproducible samples for secretomic studies when the maximum CO2 production rate occurred, ensuring consistent physiological states. Extracellular extracts from SSF cultures were treated by SDS-PAGE, digested with trypsin, and analyzed by LC–MS/MS. Of 531 sequences identified, 207 proteins were analyzed. Twenty-five were identified as the most abundant unregulated proteins; 87 were found to be up-regulated and 95 were down-regulated with increasing glucose concentration. Of the regulated proteins, 120 were enzymes, most involved in the metabolism of carbohydrates (51), amino acids (23), and nucleotides (9). This study shows the high protein secretory activity of A. brasiliensis under SSF conditions. High glucose concentration favors catabolic activities, while some stress-related proteins and those involved in proteolysis are down-regulated. |
doi_str_mv | 10.1021/acs.jproteome.6b00663 |
format | article |
fullrecord | <record><control><sourceid>proquest_osti_</sourceid><recordid>TN_cdi_osti_scitechconnect_1534732</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1835402015</sourcerecordid><originalsourceid>FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123</originalsourceid><addsrcrecordid>eNqFkU1P5SAUhsnEyfg1P2EMcTWbXqEU2i6N8SvRuLjjmgA9KKYtVw5d-O_FuVe3hgUn5HkPyfMS8oezFWc1PzMOVy-bFDPECVbKMqaU-EEOuBSyEj1r9z7nrhf75BDxhTEuWyZ-kf26lU0nFD8gdg0uQY5TcPR2xvD0nGmYc6TX4-IiAr2HbGwcA040enqOG0hPYRwXpDYZDGOAksKSoetCDdU6mwz0CtIEcxlDnI_JT29GhN-7-4g8Xl3-u7ip7h6uby_O7yoj2i5Xg1C1cAp6N9jWd6ytrffQDsr3DAbDu_LeDFZJJVnnbOONlU4OrJy-9rwWR-R0uzdiDhpdyOCeXZxncFkXFU0rPqC_W6ioe10As54COhhHM0NcUPNOyIbVxVRB5RZ1KSIm8HqTwmTSm-ZMf3SgSwf6qwO966DkTnZfLHaC4Sv1Kb0AfAv8z8clzUXLN0vfAQC1maA</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1835402015</pqid></control><display><type>article</type><title>Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation</title><source>American Chemical Society:Jisc Collections:American Chemical Society Read & Publish Agreement 2022-2024 (Reading list)</source><creator>Volke-Sepulveda, Tania ; Salgado-Bautista, Daniel ; Bergmann, Carl ; Wells, Lance ; Gutierrez-Sanchez, Gerardo ; Favela-Torres, Ernesto</creator><creatorcontrib>Volke-Sepulveda, Tania ; Salgado-Bautista, Daniel ; Bergmann, Carl ; Wells, Lance ; Gutierrez-Sanchez, Gerardo ; Favela-Torres, Ernesto ; Univ. of Georgia, Athens, GA (United States)</creatorcontrib><description>The genus Aspergillus is ubiquitous in nature and includes various species extensively exploited industrially due to their ability to produce and secrete a variety of enzymes and metabolites. Most processes are performed in submerged fermentation (SmF); however, solid-state fermentation (SSF) offers several advantages, including lower catabolite repression and substrate inhibition and higher productivity and stability of the enzymes produced. This study aimed to explain the improved metabolic behavior of A. brasiliensis ATCC9642 in SSF at high glucose concentrations through a proteomic approach. Online respirometric analysis provided reproducible samples for secretomic studies when the maximum CO2 production rate occurred, ensuring consistent physiological states. Extracellular extracts from SSF cultures were treated by SDS-PAGE, digested with trypsin, and analyzed by LC–MS/MS. Of 531 sequences identified, 207 proteins were analyzed. Twenty-five were identified as the most abundant unregulated proteins; 87 were found to be up-regulated and 95 were down-regulated with increasing glucose concentration. Of the regulated proteins, 120 were enzymes, most involved in the metabolism of carbohydrates (51), amino acids (23), and nucleotides (9). This study shows the high protein secretory activity of A. brasiliensis under SSF conditions. High glucose concentration favors catabolic activities, while some stress-related proteins and those involved in proteolysis are down-regulated.</description><identifier>ISSN: 1535-3893</identifier><identifier>EISSN: 1535-3907</identifier><identifier>DOI: 10.1021/acs.jproteome.6b00663</identifier><identifier>PMID: 27548361</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Aspergillus - enzymology ; Aspergillus - metabolism ; Biochemistry & Molecular Biology ; Carbohydrate Metabolism ; Carbon Dioxide - metabolism ; Chromatography, Liquid ; Electrophoresis, Polyacrylamide Gel ; Fermentation ; Gene Expression Regulation, Fungal - drug effects ; Glucose - metabolism ; Glucose - pharmacology ; Mass Spectrometry ; Metabolism - drug effects ; Proteomics - methods</subject><ispartof>Journal of proteome research, 2016-10, Vol.15 (10), p.3856-3871</ispartof><rights>Copyright © 2016 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123</citedby><cites>FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,776,780,881,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27548361$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/1534732$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Volke-Sepulveda, Tania</creatorcontrib><creatorcontrib>Salgado-Bautista, Daniel</creatorcontrib><creatorcontrib>Bergmann, Carl</creatorcontrib><creatorcontrib>Wells, Lance</creatorcontrib><creatorcontrib>Gutierrez-Sanchez, Gerardo</creatorcontrib><creatorcontrib>Favela-Torres, Ernesto</creatorcontrib><creatorcontrib>Univ. of Georgia, Athens, GA (United States)</creatorcontrib><title>Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation</title><title>Journal of proteome research</title><addtitle>J. Proteome Res</addtitle><description>The genus Aspergillus is ubiquitous in nature and includes various species extensively exploited industrially due to their ability to produce and secrete a variety of enzymes and metabolites. Most processes are performed in submerged fermentation (SmF); however, solid-state fermentation (SSF) offers several advantages, including lower catabolite repression and substrate inhibition and higher productivity and stability of the enzymes produced. This study aimed to explain the improved metabolic behavior of A. brasiliensis ATCC9642 in SSF at high glucose concentrations through a proteomic approach. Online respirometric analysis provided reproducible samples for secretomic studies when the maximum CO2 production rate occurred, ensuring consistent physiological states. Extracellular extracts from SSF cultures were treated by SDS-PAGE, digested with trypsin, and analyzed by LC–MS/MS. Of 531 sequences identified, 207 proteins were analyzed. Twenty-five were identified as the most abundant unregulated proteins; 87 were found to be up-regulated and 95 were down-regulated with increasing glucose concentration. Of the regulated proteins, 120 were enzymes, most involved in the metabolism of carbohydrates (51), amino acids (23), and nucleotides (9). This study shows the high protein secretory activity of A. brasiliensis under SSF conditions. High glucose concentration favors catabolic activities, while some stress-related proteins and those involved in proteolysis are down-regulated.</description><subject>Aspergillus - enzymology</subject><subject>Aspergillus - metabolism</subject><subject>Biochemistry & Molecular Biology</subject><subject>Carbohydrate Metabolism</subject><subject>Carbon Dioxide - metabolism</subject><subject>Chromatography, Liquid</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Fermentation</subject><subject>Gene Expression Regulation, Fungal - drug effects</subject><subject>Glucose - metabolism</subject><subject>Glucose - pharmacology</subject><subject>Mass Spectrometry</subject><subject>Metabolism - drug effects</subject><subject>Proteomics - methods</subject><issn>1535-3893</issn><issn>1535-3907</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkU1P5SAUhsnEyfg1P2EMcTWbXqEU2i6N8SvRuLjjmgA9KKYtVw5d-O_FuVe3hgUn5HkPyfMS8oezFWc1PzMOVy-bFDPECVbKMqaU-EEOuBSyEj1r9z7nrhf75BDxhTEuWyZ-kf26lU0nFD8gdg0uQY5TcPR2xvD0nGmYc6TX4-IiAr2HbGwcA040enqOG0hPYRwXpDYZDGOAksKSoetCDdU6mwz0CtIEcxlDnI_JT29GhN-7-4g8Xl3-u7ip7h6uby_O7yoj2i5Xg1C1cAp6N9jWd6ytrffQDsr3DAbDu_LeDFZJJVnnbOONlU4OrJy-9rwWR-R0uzdiDhpdyOCeXZxncFkXFU0rPqC_W6ioe10As54COhhHM0NcUPNOyIbVxVRB5RZ1KSIm8HqTwmTSm-ZMf3SgSwf6qwO966DkTnZfLHaC4Sv1Kb0AfAv8z8clzUXLN0vfAQC1maA</recordid><startdate>20161007</startdate><enddate>20161007</enddate><creator>Volke-Sepulveda, Tania</creator><creator>Salgado-Bautista, Daniel</creator><creator>Bergmann, Carl</creator><creator>Wells, Lance</creator><creator>Gutierrez-Sanchez, Gerardo</creator><creator>Favela-Torres, Ernesto</creator><general>American Chemical Society</general><general>American Chemical Society (ACS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OTOTI</scope></search><sort><creationdate>20161007</creationdate><title>Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation</title><author>Volke-Sepulveda, Tania ; Salgado-Bautista, Daniel ; Bergmann, Carl ; Wells, Lance ; Gutierrez-Sanchez, Gerardo ; Favela-Torres, Ernesto</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Aspergillus - enzymology</topic><topic>Aspergillus - metabolism</topic><topic>Biochemistry & Molecular Biology</topic><topic>Carbohydrate Metabolism</topic><topic>Carbon Dioxide - metabolism</topic><topic>Chromatography, Liquid</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Fermentation</topic><topic>Gene Expression Regulation, Fungal - drug effects</topic><topic>Glucose - metabolism</topic><topic>Glucose - pharmacology</topic><topic>Mass Spectrometry</topic><topic>Metabolism - drug effects</topic><topic>Proteomics - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Volke-Sepulveda, Tania</creatorcontrib><creatorcontrib>Salgado-Bautista, Daniel</creatorcontrib><creatorcontrib>Bergmann, Carl</creatorcontrib><creatorcontrib>Wells, Lance</creatorcontrib><creatorcontrib>Gutierrez-Sanchez, Gerardo</creatorcontrib><creatorcontrib>Favela-Torres, Ernesto</creatorcontrib><creatorcontrib>Univ. of Georgia, Athens, GA (United States)</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><jtitle>Journal of proteome research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Volke-Sepulveda, Tania</au><au>Salgado-Bautista, Daniel</au><au>Bergmann, Carl</au><au>Wells, Lance</au><au>Gutierrez-Sanchez, Gerardo</au><au>Favela-Torres, Ernesto</au><aucorp>Univ. of Georgia, Athens, GA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation</atitle><jtitle>Journal of proteome research</jtitle><addtitle>J. Proteome Res</addtitle><date>2016-10-07</date><risdate>2016</risdate><volume>15</volume><issue>10</issue><spage>3856</spage><epage>3871</epage><pages>3856-3871</pages><issn>1535-3893</issn><eissn>1535-3907</eissn><abstract>The genus Aspergillus is ubiquitous in nature and includes various species extensively exploited industrially due to their ability to produce and secrete a variety of enzymes and metabolites. Most processes are performed in submerged fermentation (SmF); however, solid-state fermentation (SSF) offers several advantages, including lower catabolite repression and substrate inhibition and higher productivity and stability of the enzymes produced. This study aimed to explain the improved metabolic behavior of A. brasiliensis ATCC9642 in SSF at high glucose concentrations through a proteomic approach. Online respirometric analysis provided reproducible samples for secretomic studies when the maximum CO2 production rate occurred, ensuring consistent physiological states. Extracellular extracts from SSF cultures were treated by SDS-PAGE, digested with trypsin, and analyzed by LC–MS/MS. Of 531 sequences identified, 207 proteins were analyzed. Twenty-five were identified as the most abundant unregulated proteins; 87 were found to be up-regulated and 95 were down-regulated with increasing glucose concentration. Of the regulated proteins, 120 were enzymes, most involved in the metabolism of carbohydrates (51), amino acids (23), and nucleotides (9). This study shows the high protein secretory activity of A. brasiliensis under SSF conditions. High glucose concentration favors catabolic activities, while some stress-related proteins and those involved in proteolysis are down-regulated.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>27548361</pmid><doi>10.1021/acs.jproteome.6b00663</doi><tpages>16</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1535-3893 |
ispartof | Journal of proteome research, 2016-10, Vol.15 (10), p.3856-3871 |
issn | 1535-3893 1535-3907 |
language | eng |
recordid | cdi_osti_scitechconnect_1534732 |
source | American Chemical Society:Jisc Collections:American Chemical Society Read & Publish Agreement 2022-2024 (Reading list) |
subjects | Aspergillus - enzymology Aspergillus - metabolism Biochemistry & Molecular Biology Carbohydrate Metabolism Carbon Dioxide - metabolism Chromatography, Liquid Electrophoresis, Polyacrylamide Gel Fermentation Gene Expression Regulation, Fungal - drug effects Glucose - metabolism Glucose - pharmacology Mass Spectrometry Metabolism - drug effects Proteomics - methods |
title | Secretomic Insight into Glucose Metabolism of Aspergillus brasiliensis in Solid-State Fermentation |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-30T22%3A21%3A12IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_osti_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Secretomic%20Insight%20into%20Glucose%20Metabolism%20of%20Aspergillus%20brasiliensis%20in%20Solid-State%20Fermentation&rft.jtitle=Journal%20of%20proteome%20research&rft.au=Volke-Sepulveda,%20Tania&rft.aucorp=Univ.%20of%20Georgia,%20Athens,%20GA%20(United%20States)&rft.date=2016-10-07&rft.volume=15&rft.issue=10&rft.spage=3856&rft.epage=3871&rft.pages=3856-3871&rft.issn=1535-3893&rft.eissn=1535-3907&rft_id=info:doi/10.1021/acs.jproteome.6b00663&rft_dat=%3Cproquest_osti_%3E1835402015%3C/proquest_osti_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-a378t-d3623c6e9cdb7f8072bffe7d6f90eda18cdb4db656508cb4fab5c5d0d0d92f123%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1835402015&rft_id=info:pmid/27548361&rfr_iscdi=true |