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MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam
MeV-SIMS is an emerging mass spectrometry imaging method, which utilizes fast, heavy ions to desorb secondary molecules. High yields and low fragmentation rates of large molecules, associated with the electronic sputtering process, make it particularly useful in biomedical research, where insight in...
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Published in: | Journal of the American Society for Mass Spectrometry 2019-09, Vol.30 (9), p.1801-1812 |
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container_title | Journal of the American Society for Mass Spectrometry |
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creator | Jenčič, Boštjan Vavpetič, Primož Kelemen, Mitja Vencelj, Matjaž Vogel-Mikuš, Katarina Kavčič, Anja Pelicon, Primož |
description | MeV-SIMS is an emerging mass spectrometry imaging method, which utilizes fast, heavy ions to desorb secondary molecules. High yields and low fragmentation rates of large molecules, associated with the electronic sputtering process, make it particularly useful in biomedical research, where insight into distribution of organic molecules is needed. Since the implementation of MeV-SIMS in to the micro-beam line at the tandem accelerator of Jožef Stefan Institute, MeV-SIMS provided some valuable observations on the distribution of biomolecules in plant tissue, as discussed by Jenčič et al. (Nucl. Inst. Methods Phys. Res. B.
371
, 205–210,
2016
; Nucl. Inst. Methods Phys. Res. B.
404
, 140–145, 2017). However, limited focusing ability of the chlorine ion beam only allowed imaging at the tissue level. In order to surpass shortcomings of the existing method, we introduced a new approach, where we employ a continuous, low-current primary beam. In this mode, we bombard thin samples with a steady chlorine ion flux of approx. 5000 ions/s. After desorbing molecules, chlorine ions penetrate through the thinly cut sample and trigger the time-of-flight “start” signal on a continuous electron multiplier detector, positioned behind the sample. Such bombardment is more effective than previously used pulsing-beam mode, which demanded several orders of magnitude higher primary ion beam currents. Sub-micrometer focusing of low-current primary ion beam allows imaging of biological tissue on a subcellular scale. Simultaneously, new time-of-flight acquisition approach also improves mass resolution by a factor of 5. Within the article, we compare the performance of both methods and demonstrate the application of continuous mode on biological tissue. We also describe the thin sample preparation protocol, necessary for measurements with low primary ion currents. |
doi_str_mv | 10.1007/s13361-019-02258-8 |
format | article |
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371
, 205–210,
2016
; Nucl. Inst. Methods Phys. Res. B.
404
, 140–145, 2017). However, limited focusing ability of the chlorine ion beam only allowed imaging at the tissue level. In order to surpass shortcomings of the existing method, we introduced a new approach, where we employ a continuous, low-current primary beam. In this mode, we bombard thin samples with a steady chlorine ion flux of approx. 5000 ions/s. After desorbing molecules, chlorine ions penetrate through the thinly cut sample and trigger the time-of-flight “start” signal on a continuous electron multiplier detector, positioned behind the sample. Such bombardment is more effective than previously used pulsing-beam mode, which demanded several orders of magnitude higher primary ion beam currents. Sub-micrometer focusing of low-current primary ion beam allows imaging of biological tissue on a subcellular scale. Simultaneously, new time-of-flight acquisition approach also improves mass resolution by a factor of 5. Within the article, we compare the performance of both methods and demonstrate the application of continuous mode on biological tissue. We also describe the thin sample preparation protocol, necessary for measurements with low primary ion currents.</description><identifier>ISSN: 1044-0305</identifier><identifier>EISSN: 1879-1123</identifier><identifier>DOI: 10.1007/s13361-019-02258-8</identifier><identifier>PMID: 31250317</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Amino Acids - analysis ; Amino Acids - chemistry ; Analytical Chemistry ; ATOMIC AND MOLECULAR PHYSICS ; BEAM CURRENTS ; Bioinformatics ; Biomolecules ; Biotechnology ; Chemistry ; Chemistry and Materials Science ; Chlorine ; CHLORINE IONS ; COMPARATIVE EVALUATIONS ; Electron bombardment ; ELECTRON MULTIPLIER DETECTORS ; Equipment Design ; Focusing ; HEAVY IONS ; Humans ; Hydrogen - analysis ; Hydrogen - chemistry ; Image Processing, Computer-Assisted - methods ; Imaging ; ION BEAMS ; Ion currents ; Ion flux ; ION MICROPROBE ANALYSIS ; Liver - chemistry ; Liver - diagnostic imaging ; MASS RESOLUTION ; Mass spectrometry ; MASS SPECTROSCOPY ; MEV RANGE ; Microbeams ; MOLECULES ; Organic Chemistry ; Photomultiplier tubes ; Poisson Distribution ; Proteomics ; Research Article ; Seeds - chemistry ; Spectrometry, Mass, Secondary Ion - instrumentation ; Spectrometry, Mass, Secondary Ion - methods ; TANDEM ELECTROSTATIC ACCELERATORS ; TIME-OF-FLIGHT METHOD ; Tissues ; Zea mays - chemistry</subject><ispartof>Journal of the American Society for Mass Spectrometry, 2019-09, Vol.30 (9), p.1801-1812</ispartof><rights>American Society for Mass Spectrometry 2019</rights><rights>Journal of The American Society for Mass Spectrometry is a copyright of Springer, (2019). All Rights Reserved.</rights><rights>American Society for Mass Spectrometry 2019.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c431t-e0e6c52ff37c08abed3d43d671976e135049bc2618c6d41bcbb54f793ad468b03</citedby><cites>FETCH-LOGICAL-c431t-e0e6c52ff37c08abed3d43d671976e135049bc2618c6d41bcbb54f793ad468b03</cites><orcidid>0000-0003-2469-3342</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>230,314,780,784,885,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31250317$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/biblio/22925150$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Jenčič, Boštjan</creatorcontrib><creatorcontrib>Vavpetič, Primož</creatorcontrib><creatorcontrib>Kelemen, Mitja</creatorcontrib><creatorcontrib>Vencelj, Matjaž</creatorcontrib><creatorcontrib>Vogel-Mikuš, Katarina</creatorcontrib><creatorcontrib>Kavčič, Anja</creatorcontrib><creatorcontrib>Pelicon, Primož</creatorcontrib><title>MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam</title><title>Journal of the American Society for Mass Spectrometry</title><addtitle>J. Am. Soc. Mass Spectrom</addtitle><addtitle>J Am Soc Mass Spectrom</addtitle><description>MeV-SIMS is an emerging mass spectrometry imaging method, which utilizes fast, heavy ions to desorb secondary molecules. High yields and low fragmentation rates of large molecules, associated with the electronic sputtering process, make it particularly useful in biomedical research, where insight into distribution of organic molecules is needed. Since the implementation of MeV-SIMS in to the micro-beam line at the tandem accelerator of Jožef Stefan Institute, MeV-SIMS provided some valuable observations on the distribution of biomolecules in plant tissue, as discussed by Jenčič et al. (Nucl. Inst. Methods Phys. Res. B.
371
, 205–210,
2016
; Nucl. Inst. Methods Phys. Res. B.
404
, 140–145, 2017). However, limited focusing ability of the chlorine ion beam only allowed imaging at the tissue level. In order to surpass shortcomings of the existing method, we introduced a new approach, where we employ a continuous, low-current primary beam. In this mode, we bombard thin samples with a steady chlorine ion flux of approx. 5000 ions/s. After desorbing molecules, chlorine ions penetrate through the thinly cut sample and trigger the time-of-flight “start” signal on a continuous electron multiplier detector, positioned behind the sample. Such bombardment is more effective than previously used pulsing-beam mode, which demanded several orders of magnitude higher primary ion beam currents. Sub-micrometer focusing of low-current primary ion beam allows imaging of biological tissue on a subcellular scale. Simultaneously, new time-of-flight acquisition approach also improves mass resolution by a factor of 5. Within the article, we compare the performance of both methods and demonstrate the application of continuous mode on biological tissue. We also describe the thin sample preparation protocol, necessary for measurements with low primary ion currents.</description><subject>Amino Acids - analysis</subject><subject>Amino Acids - chemistry</subject><subject>Analytical Chemistry</subject><subject>ATOMIC AND MOLECULAR PHYSICS</subject><subject>BEAM CURRENTS</subject><subject>Bioinformatics</subject><subject>Biomolecules</subject><subject>Biotechnology</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Chlorine</subject><subject>CHLORINE IONS</subject><subject>COMPARATIVE EVALUATIONS</subject><subject>Electron bombardment</subject><subject>ELECTRON MULTIPLIER DETECTORS</subject><subject>Equipment Design</subject><subject>Focusing</subject><subject>HEAVY IONS</subject><subject>Humans</subject><subject>Hydrogen - analysis</subject><subject>Hydrogen - chemistry</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Imaging</subject><subject>ION BEAMS</subject><subject>Ion currents</subject><subject>Ion flux</subject><subject>ION MICROPROBE ANALYSIS</subject><subject>Liver - chemistry</subject><subject>Liver - diagnostic imaging</subject><subject>MASS RESOLUTION</subject><subject>Mass spectrometry</subject><subject>MASS SPECTROSCOPY</subject><subject>MEV RANGE</subject><subject>Microbeams</subject><subject>MOLECULES</subject><subject>Organic Chemistry</subject><subject>Photomultiplier tubes</subject><subject>Poisson Distribution</subject><subject>Proteomics</subject><subject>Research Article</subject><subject>Seeds - chemistry</subject><subject>Spectrometry, Mass, Secondary Ion - instrumentation</subject><subject>Spectrometry, Mass, Secondary Ion - methods</subject><subject>TANDEM ELECTROSTATIC ACCELERATORS</subject><subject>TIME-OF-FLIGHT METHOD</subject><subject>Tissues</subject><subject>Zea mays - chemistry</subject><issn>1044-0305</issn><issn>1879-1123</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp9kU1v1DAQhi1ERUvhD3BAlrhwMZ3xd46worBSq0XqwtVKHGfrauOUOFHFv8fblNJTTx7Jz7wz9kPIO4RPCGDOMgqhkQFWDDhXltkX5AStqRgiFy9LDVIyEKCOyeucbwDQQGVekWOBXIFAc0JWl-EXu1pfXtHt5pyu-3oX044OHd2MuzpFT7cx5znQuzhd09WQppjmYc70xxj7evxDv4S6f0OOunqfw9uH85T8PP-6XX1nF5tv69XnC-alwIkFCNor3nXCeLB1E1rRStFqg5XRAYUCWTWea7RetxIb3zRKdqYSdSu1bUCckg9L7pCn6LKPU_DXfkgp-MlxXnGF6kB9XKjbcfg9hzy5PmYf9vs6hbJ5ARVooY18EviI3gzzmMobCmWE5WjRPE9JC6gk2ELxhfLjkPMYOne7fJFDcAddbtHlii53r8sdmt4_RM9NH9rHln9-CiAWIJertAvj_9nPxP4FvTqbTA</recordid><startdate>20190901</startdate><enddate>20190901</enddate><creator>Jenčič, Boštjan</creator><creator>Vavpetič, Primož</creator><creator>Kelemen, Mitja</creator><creator>Vencelj, Matjaž</creator><creator>Vogel-Mikuš, Katarina</creator><creator>Kavčič, Anja</creator><creator>Pelicon, Primož</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>K9.</scope><scope>7X8</scope><scope>OTOTI</scope><orcidid>https://orcid.org/0000-0003-2469-3342</orcidid></search><sort><creationdate>20190901</creationdate><title>MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam</title><author>Jenčič, Boštjan ; Vavpetič, Primož ; Kelemen, Mitja ; Vencelj, Matjaž ; Vogel-Mikuš, Katarina ; Kavčič, Anja ; Pelicon, Primož</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c431t-e0e6c52ff37c08abed3d43d671976e135049bc2618c6d41bcbb54f793ad468b03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Amino Acids - analysis</topic><topic>Amino Acids - chemistry</topic><topic>Analytical Chemistry</topic><topic>ATOMIC AND MOLECULAR PHYSICS</topic><topic>BEAM CURRENTS</topic><topic>Bioinformatics</topic><topic>Biomolecules</topic><topic>Biotechnology</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Chlorine</topic><topic>CHLORINE IONS</topic><topic>COMPARATIVE EVALUATIONS</topic><topic>Electron bombardment</topic><topic>ELECTRON MULTIPLIER DETECTORS</topic><topic>Equipment Design</topic><topic>Focusing</topic><topic>HEAVY IONS</topic><topic>Humans</topic><topic>Hydrogen - analysis</topic><topic>Hydrogen - chemistry</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Imaging</topic><topic>ION BEAMS</topic><topic>Ion currents</topic><topic>Ion flux</topic><topic>ION MICROPROBE ANALYSIS</topic><topic>Liver - chemistry</topic><topic>Liver - diagnostic imaging</topic><topic>MASS RESOLUTION</topic><topic>Mass spectrometry</topic><topic>MASS SPECTROSCOPY</topic><topic>MEV RANGE</topic><topic>Microbeams</topic><topic>MOLECULES</topic><topic>Organic Chemistry</topic><topic>Photomultiplier tubes</topic><topic>Poisson Distribution</topic><topic>Proteomics</topic><topic>Research Article</topic><topic>Seeds - chemistry</topic><topic>Spectrometry, Mass, Secondary Ion - instrumentation</topic><topic>Spectrometry, Mass, Secondary Ion - methods</topic><topic>TANDEM ELECTROSTATIC ACCELERATORS</topic><topic>TIME-OF-FLIGHT METHOD</topic><topic>Tissues</topic><topic>Zea mays - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jenčič, Boštjan</creatorcontrib><creatorcontrib>Vavpetič, Primož</creatorcontrib><creatorcontrib>Kelemen, Mitja</creatorcontrib><creatorcontrib>Vencelj, Matjaž</creatorcontrib><creatorcontrib>Vogel-Mikuš, Katarina</creatorcontrib><creatorcontrib>Kavčič, Anja</creatorcontrib><creatorcontrib>Pelicon, Primož</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV</collection><jtitle>Journal of the American Society for Mass Spectrometry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jenčič, Boštjan</au><au>Vavpetič, Primož</au><au>Kelemen, Mitja</au><au>Vencelj, Matjaž</au><au>Vogel-Mikuš, Katarina</au><au>Kavčič, Anja</au><au>Pelicon, Primož</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam</atitle><jtitle>Journal of the American Society for Mass Spectrometry</jtitle><stitle>J. Am. Soc. Mass Spectrom</stitle><addtitle>J Am Soc Mass Spectrom</addtitle><date>2019-09-01</date><risdate>2019</risdate><volume>30</volume><issue>9</issue><spage>1801</spage><epage>1812</epage><pages>1801-1812</pages><issn>1044-0305</issn><eissn>1879-1123</eissn><abstract>MeV-SIMS is an emerging mass spectrometry imaging method, which utilizes fast, heavy ions to desorb secondary molecules. High yields and low fragmentation rates of large molecules, associated with the electronic sputtering process, make it particularly useful in biomedical research, where insight into distribution of organic molecules is needed. Since the implementation of MeV-SIMS in to the micro-beam line at the tandem accelerator of Jožef Stefan Institute, MeV-SIMS provided some valuable observations on the distribution of biomolecules in plant tissue, as discussed by Jenčič et al. (Nucl. Inst. Methods Phys. Res. B.
371
, 205–210,
2016
; Nucl. Inst. Methods Phys. Res. B.
404
, 140–145, 2017). However, limited focusing ability of the chlorine ion beam only allowed imaging at the tissue level. In order to surpass shortcomings of the existing method, we introduced a new approach, where we employ a continuous, low-current primary beam. In this mode, we bombard thin samples with a steady chlorine ion flux of approx. 5000 ions/s. After desorbing molecules, chlorine ions penetrate through the thinly cut sample and trigger the time-of-flight “start” signal on a continuous electron multiplier detector, positioned behind the sample. Such bombardment is more effective than previously used pulsing-beam mode, which demanded several orders of magnitude higher primary ion beam currents. Sub-micrometer focusing of low-current primary ion beam allows imaging of biological tissue on a subcellular scale. Simultaneously, new time-of-flight acquisition approach also improves mass resolution by a factor of 5. Within the article, we compare the performance of both methods and demonstrate the application of continuous mode on biological tissue. We also describe the thin sample preparation protocol, necessary for measurements with low primary ion currents.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>31250317</pmid><doi>10.1007/s13361-019-02258-8</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0003-2469-3342</orcidid></addata></record> |
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source | American Chemical Society:Jisc Collections:American Chemical Society Read & Publish Agreement 2022-2024 (Reading list) |
subjects | Amino Acids - analysis Amino Acids - chemistry Analytical Chemistry ATOMIC AND MOLECULAR PHYSICS BEAM CURRENTS Bioinformatics Biomolecules Biotechnology Chemistry Chemistry and Materials Science Chlorine CHLORINE IONS COMPARATIVE EVALUATIONS Electron bombardment ELECTRON MULTIPLIER DETECTORS Equipment Design Focusing HEAVY IONS Humans Hydrogen - analysis Hydrogen - chemistry Image Processing, Computer-Assisted - methods Imaging ION BEAMS Ion currents Ion flux ION MICROPROBE ANALYSIS Liver - chemistry Liver - diagnostic imaging MASS RESOLUTION Mass spectrometry MASS SPECTROSCOPY MEV RANGE Microbeams MOLECULES Organic Chemistry Photomultiplier tubes Poisson Distribution Proteomics Research Article Seeds - chemistry Spectrometry, Mass, Secondary Ion - instrumentation Spectrometry, Mass, Secondary Ion - methods TANDEM ELECTROSTATIC ACCELERATORS TIME-OF-FLIGHT METHOD Tissues Zea mays - chemistry |
title | MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam |
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