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Tick-Borne Rickettsial Pathogens in Ticks and Small Mammals in Korea

In order to investigate the prevalence of tick-borne infectious agents among ticks, ticks comprising five species from two genera (Hemaphysalis spp. and Ixodes spp.) were screened using molecular techniques. Ticks (3,135) were collected from small wild-caught mammals or by dragging/flagging in the R...

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Published in:Applied and Environmental Microbiology 2006-09, Vol.72 (9), p.5766-5776
Main Authors: Kim, Chul-Min, Yi, Ying-Hua, Yu, Do-Hyeon, Lee, Mi-Jin, Cho, Mae-Rim, Desai, Atul R, Shringi, Smriti, Klein, Terry A, Kim, Heung-Chul, Song, Jin-Won, Baek, Luck-Ju, Chong, Sung-Tae, O'Guinn, Monica L, Lee, John S, Lee, In-Yong, Park, Jin-Ho, Foley, Janet, Chae, Joon-Seok
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cited_by cdi_FETCH-LOGICAL-c5016-12f2caab3f37bf9d77e7b3a5c44e3e48cdf74e2b8cc4fa4acc2cb04d41e1f66d3
cites cdi_FETCH-LOGICAL-c5016-12f2caab3f37bf9d77e7b3a5c44e3e48cdf74e2b8cc4fa4acc2cb04d41e1f66d3
container_end_page 5776
container_issue 9
container_start_page 5766
container_title Applied and Environmental Microbiology
container_volume 72
creator Kim, Chul-Min
Yi, Ying-Hua
Yu, Do-Hyeon
Lee, Mi-Jin
Cho, Mae-Rim
Desai, Atul R
Shringi, Smriti
Klein, Terry A
Kim, Heung-Chul
Song, Jin-Won
Baek, Luck-Ju
Chong, Sung-Tae
O'Guinn, Monica L
Lee, John S
Lee, In-Yong
Park, Jin-Ho
Foley, Janet
Chae, Joon-Seok
description In order to investigate the prevalence of tick-borne infectious agents among ticks, ticks comprising five species from two genera (Hemaphysalis spp. and Ixodes spp.) were screened using molecular techniques. Ticks (3,135) were collected from small wild-caught mammals or by dragging/flagging in the Republic of Korea (ROK) and were pooled into a total of 1,638 samples (1 to 27 ticks per pool). From the 1,638 tick samples, species-specific fragments of Anaplasma phagocytophilum (1 sample), Anaplasma platys (52 samples), Ehrlichia chaffeensis (29 samples), Ehrlichia ewingii (2 samples), Ehrlichia canis (18 samples), and Rickettsia rickettsii (28 samples) were amplified by PCR assay. Twenty-one pooled and individual tick samples had mixed infections of two (15 samples) or three (6 samples) pathogens. In addition, 424 spleen samples from small captured mammals (389 rodents, 33 insectivores, and 2 weasels) were screened for selected zoonotic pathogens. Species-specific DNA fragments of A. phagocytophilum (110 samples), A. platys (68 samples), E. chaffeensis (8 samples), E. ewingii (26 samples), E. canis (51 samples), and Rickettsia sp. (22 samples) were amplified by PCR assay. One hundred thirty small mammals had single infections, while 4, 14, and 21 striped field mice (Apodemus agrarius) had mixed infections of four, three, and two pathogens, respectively. Phylogenetic analysis based on nucleotide sequence comparison also revealed that Korean strains of E. chaffeensis clustered closely with those from China and the United States, while the Rickettsia (rOmpA) sequences clustered within a clade together with a Chinese strain. These results suggest that these agents should be considered in differential diagnosis while examining cases of acute febrile illnesses in humans as well as animals in the ROK.
doi_str_mv 10.1128/aem.00431-06
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Ticks (3,135) were collected from small wild-caught mammals or by dragging/flagging in the Republic of Korea (ROK) and were pooled into a total of 1,638 samples (1 to 27 ticks per pool). From the 1,638 tick samples, species-specific fragments of Anaplasma phagocytophilum (1 sample), Anaplasma platys (52 samples), Ehrlichia chaffeensis (29 samples), Ehrlichia ewingii (2 samples), Ehrlichia canis (18 samples), and Rickettsia rickettsii (28 samples) were amplified by PCR assay. Twenty-one pooled and individual tick samples had mixed infections of two (15 samples) or three (6 samples) pathogens. In addition, 424 spleen samples from small captured mammals (389 rodents, 33 insectivores, and 2 weasels) were screened for selected zoonotic pathogens. Species-specific DNA fragments of A. phagocytophilum (110 samples), A. platys (68 samples), E. chaffeensis (8 samples), E. ewingii (26 samples), E. canis (51 samples), and Rickettsia sp. (22 samples) were amplified by PCR assay. One hundred thirty small mammals had single infections, while 4, 14, and 21 striped field mice (Apodemus agrarius) had mixed infections of four, three, and two pathogens, respectively. Phylogenetic analysis based on nucleotide sequence comparison also revealed that Korean strains of E. chaffeensis clustered closely with those from China and the United States, while the Rickettsia (rOmpA) sequences clustered within a clade together with a Chinese strain. 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Psychology ; genes ; Hemaphysalis ; Humans ; Infections ; insectivores ; Ixodes ; Ixodes - microbiology ; Korea ; Mammals ; Mammals - microbiology ; Microbial Ecology ; Microbiology ; molecular sequence data ; Murinae - microbiology ; Mustela ; nucleotide sequences ; Parasites ; Pathogens ; Phylogeny ; Polymerase Chain Reaction ; ribosomal RNA ; Rickettsia ; Rickettsia - classification ; Rickettsia - genetics ; Rickettsia - isolation &amp; purification ; Rickettsia - pathogenicity ; Rickettsia rickettsii ; rickettsial diseases ; rodents ; tick-borne diseases ; Tick-Borne Diseases - diagnosis ; Tick-Borne Diseases - microbiology ; Ticks - microbiology ; wild animals</subject><ispartof>Applied and Environmental Microbiology, 2006-09, Vol.72 (9), p.5766-5776</ispartof><rights>2007 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Sep 2006</rights><rights>Copyright © 2006, American Society for Microbiology 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5016-12f2caab3f37bf9d77e7b3a5c44e3e48cdf74e2b8cc4fa4acc2cb04d41e1f66d3</citedby><cites>FETCH-LOGICAL-c5016-12f2caab3f37bf9d77e7b3a5c44e3e48cdf74e2b8cc4fa4acc2cb04d41e1f66d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1563606/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1563606/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,3189,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=18099170$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16957192$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Chul-Min</creatorcontrib><creatorcontrib>Yi, Ying-Hua</creatorcontrib><creatorcontrib>Yu, Do-Hyeon</creatorcontrib><creatorcontrib>Lee, Mi-Jin</creatorcontrib><creatorcontrib>Cho, Mae-Rim</creatorcontrib><creatorcontrib>Desai, Atul R</creatorcontrib><creatorcontrib>Shringi, Smriti</creatorcontrib><creatorcontrib>Klein, Terry A</creatorcontrib><creatorcontrib>Kim, Heung-Chul</creatorcontrib><creatorcontrib>Song, Jin-Won</creatorcontrib><creatorcontrib>Baek, Luck-Ju</creatorcontrib><creatorcontrib>Chong, Sung-Tae</creatorcontrib><creatorcontrib>O'Guinn, Monica L</creatorcontrib><creatorcontrib>Lee, John S</creatorcontrib><creatorcontrib>Lee, In-Yong</creatorcontrib><creatorcontrib>Park, Jin-Ho</creatorcontrib><creatorcontrib>Foley, Janet</creatorcontrib><creatorcontrib>Chae, Joon-Seok</creatorcontrib><title>Tick-Borne Rickettsial Pathogens in Ticks and Small Mammals in Korea</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>In order to investigate the prevalence of tick-borne infectious agents among ticks, ticks comprising five species from two genera (Hemaphysalis spp. and Ixodes spp.) were screened using molecular techniques. Ticks (3,135) were collected from small wild-caught mammals or by dragging/flagging in the Republic of Korea (ROK) and were pooled into a total of 1,638 samples (1 to 27 ticks per pool). From the 1,638 tick samples, species-specific fragments of Anaplasma phagocytophilum (1 sample), Anaplasma platys (52 samples), Ehrlichia chaffeensis (29 samples), Ehrlichia ewingii (2 samples), Ehrlichia canis (18 samples), and Rickettsia rickettsii (28 samples) were amplified by PCR assay. Twenty-one pooled and individual tick samples had mixed infections of two (15 samples) or three (6 samples) pathogens. In addition, 424 spleen samples from small captured mammals (389 rodents, 33 insectivores, and 2 weasels) were screened for selected zoonotic pathogens. Species-specific DNA fragments of A. phagocytophilum (110 samples), A. platys (68 samples), E. chaffeensis (8 samples), E. ewingii (26 samples), E. canis (51 samples), and Rickettsia sp. (22 samples) were amplified by PCR assay. One hundred thirty small mammals had single infections, while 4, 14, and 21 striped field mice (Apodemus agrarius) had mixed infections of four, three, and two pathogens, respectively. Phylogenetic analysis based on nucleotide sequence comparison also revealed that Korean strains of E. chaffeensis clustered closely with those from China and the United States, while the Rickettsia (rOmpA) sequences clustered within a clade together with a Chinese strain. These results suggest that these agents should be considered in differential diagnosis while examining cases of acute febrile illnesses in humans as well as animals in the ROK.</description><subject>Anaplasma</subject><subject>Anaplasma - classification</subject><subject>Anaplasma - genetics</subject><subject>Anaplasma - isolation &amp; purification</subject><subject>Anaplasma - pathogenicity</subject><subject>Animals</subject><subject>Apodemus agrarius</subject><subject>Base Sequence</subject><subject>Biological and medical sciences</subject><subject>Borrelia</subject><subject>disease prevalence</subject><subject>disease vectors</subject><subject>DNA Primers - genetics</subject><subject>DNA, Bacterial - genetics</subject><subject>Ehrlichia</subject><subject>Ehrlichia - classification</subject><subject>Ehrlichia - genetics</subject><subject>Ehrlichia - isolation &amp; purification</subject><subject>Ehrlichia - pathogenicity</subject><subject>Ehrlichia canis</subject><subject>Ehrlichia chaffeensis</subject><subject>Ehrlichia ewingii</subject><subject>ehrlichiosis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Hemaphysalis</subject><subject>Humans</subject><subject>Infections</subject><subject>insectivores</subject><subject>Ixodes</subject><subject>Ixodes - microbiology</subject><subject>Korea</subject><subject>Mammals</subject><subject>Mammals - microbiology</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>molecular sequence data</subject><subject>Murinae - microbiology</subject><subject>Mustela</subject><subject>nucleotide sequences</subject><subject>Parasites</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Polymerase Chain Reaction</subject><subject>ribosomal RNA</subject><subject>Rickettsia</subject><subject>Rickettsia - classification</subject><subject>Rickettsia - genetics</subject><subject>Rickettsia - isolation &amp; purification</subject><subject>Rickettsia - pathogenicity</subject><subject>Rickettsia rickettsii</subject><subject>rickettsial diseases</subject><subject>rodents</subject><subject>tick-borne diseases</subject><subject>Tick-Borne Diseases - diagnosis</subject><subject>Tick-Borne Diseases - microbiology</subject><subject>Ticks - microbiology</subject><subject>wild animals</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNqF0ktv1DAQAGALgei2cOMMoRKcSBk_4tgXpFLKQ7QC0fZsTRx71yWJi70L4t_jfYgCF05jaz6Nxx4T8ojCEaVMvUQ3HgEITmuQd8iMglZ1w7m8S2YAWteMCdgj-zlfQ2Eg1X2yR6VuWqrZjLy5DPZr_TqmyVVfytItlzngUH3G5SLO3ZSrMFVrkyuc-upixGGoznEscZP6GJPDB-SeL3v3cBcPyNXb08uT9_XZp3cfTo7PatsAlTVlnlnEjnvedl73bevajmNjhXDcCWV73wrHOmWt8CjQWmY7EL2gjnope35AXm3r3qy60fXWTcuEg7lJYcT000QM5u_MFBZmHr8b2kguQZYCz3cFUvy2cnlpxpCtGwacXFxlI5USTIP6L6SaU9k0a3j4D7yOqzSVVzAMGi0VMFHQiy2yKeacnP_dMgWzHqI5Pj03myGaTZeP_7zmLd5NrYBnO4DZ4uATTjbkW6fK3GkLxT3dukWYL36E5Azm0ZQPY1pmtGlauT7sydZ4jAbnqdS5umBAOVAKVAvOfwHsKbi-</recordid><startdate>200609</startdate><enddate>200609</enddate><creator>Kim, Chul-Min</creator><creator>Yi, Ying-Hua</creator><creator>Yu, Do-Hyeon</creator><creator>Lee, Mi-Jin</creator><creator>Cho, Mae-Rim</creator><creator>Desai, Atul R</creator><creator>Shringi, Smriti</creator><creator>Klein, Terry A</creator><creator>Kim, Heung-Chul</creator><creator>Song, Jin-Won</creator><creator>Baek, Luck-Ju</creator><creator>Chong, Sung-Tae</creator><creator>O'Guinn, Monica L</creator><creator>Lee, John S</creator><creator>Lee, In-Yong</creator><creator>Park, Jin-Ho</creator><creator>Foley, Janet</creator><creator>Chae, Joon-Seok</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>200609</creationdate><title>Tick-Borne Rickettsial Pathogens in Ticks and Small Mammals in Korea</title><author>Kim, Chul-Min ; Yi, Ying-Hua ; Yu, Do-Hyeon ; Lee, Mi-Jin ; Cho, Mae-Rim ; Desai, Atul R ; Shringi, Smriti ; Klein, Terry A ; Kim, Heung-Chul ; Song, Jin-Won ; Baek, Luck-Ju ; Chong, Sung-Tae ; O'Guinn, Monica L ; Lee, John S ; Lee, In-Yong ; Park, Jin-Ho ; Foley, Janet ; Chae, Joon-Seok</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5016-12f2caab3f37bf9d77e7b3a5c44e3e48cdf74e2b8cc4fa4acc2cb04d41e1f66d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Anaplasma</topic><topic>Anaplasma - classification</topic><topic>Anaplasma - genetics</topic><topic>Anaplasma - isolation &amp; purification</topic><topic>Anaplasma - pathogenicity</topic><topic>Animals</topic><topic>Apodemus agrarius</topic><topic>Base Sequence</topic><topic>Biological and medical sciences</topic><topic>Borrelia</topic><topic>disease prevalence</topic><topic>disease vectors</topic><topic>DNA Primers - genetics</topic><topic>DNA, Bacterial - genetics</topic><topic>Ehrlichia</topic><topic>Ehrlichia - classification</topic><topic>Ehrlichia - genetics</topic><topic>Ehrlichia - isolation &amp; purification</topic><topic>Ehrlichia - pathogenicity</topic><topic>Ehrlichia canis</topic><topic>Ehrlichia chaffeensis</topic><topic>Ehrlichia ewingii</topic><topic>ehrlichiosis</topic><topic>Fundamental and applied biological sciences. 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Ticks (3,135) were collected from small wild-caught mammals or by dragging/flagging in the Republic of Korea (ROK) and were pooled into a total of 1,638 samples (1 to 27 ticks per pool). From the 1,638 tick samples, species-specific fragments of Anaplasma phagocytophilum (1 sample), Anaplasma platys (52 samples), Ehrlichia chaffeensis (29 samples), Ehrlichia ewingii (2 samples), Ehrlichia canis (18 samples), and Rickettsia rickettsii (28 samples) were amplified by PCR assay. Twenty-one pooled and individual tick samples had mixed infections of two (15 samples) or three (6 samples) pathogens. In addition, 424 spleen samples from small captured mammals (389 rodents, 33 insectivores, and 2 weasels) were screened for selected zoonotic pathogens. Species-specific DNA fragments of A. phagocytophilum (110 samples), A. platys (68 samples), E. chaffeensis (8 samples), E. ewingii (26 samples), E. canis (51 samples), and Rickettsia sp. (22 samples) were amplified by PCR assay. One hundred thirty small mammals had single infections, while 4, 14, and 21 striped field mice (Apodemus agrarius) had mixed infections of four, three, and two pathogens, respectively. Phylogenetic analysis based on nucleotide sequence comparison also revealed that Korean strains of E. chaffeensis clustered closely with those from China and the United States, while the Rickettsia (rOmpA) sequences clustered within a clade together with a Chinese strain. These results suggest that these agents should be considered in differential diagnosis while examining cases of acute febrile illnesses in humans as well as animals in the ROK.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>16957192</pmid><doi>10.1128/aem.00431-06</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record>
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ispartof Applied and Environmental Microbiology, 2006-09, Vol.72 (9), p.5766-5776
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1098-5336
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source ASM_美国微生物学会期刊; PubMed Central
subjects Anaplasma
Anaplasma - classification
Anaplasma - genetics
Anaplasma - isolation & purification
Anaplasma - pathogenicity
Animals
Apodemus agrarius
Base Sequence
Biological and medical sciences
Borrelia
disease prevalence
disease vectors
DNA Primers - genetics
DNA, Bacterial - genetics
Ehrlichia
Ehrlichia - classification
Ehrlichia - genetics
Ehrlichia - isolation & purification
Ehrlichia - pathogenicity
Ehrlichia canis
Ehrlichia chaffeensis
Ehrlichia ewingii
ehrlichiosis
Fundamental and applied biological sciences. Psychology
genes
Hemaphysalis
Humans
Infections
insectivores
Ixodes
Ixodes - microbiology
Korea
Mammals
Mammals - microbiology
Microbial Ecology
Microbiology
molecular sequence data
Murinae - microbiology
Mustela
nucleotide sequences
Parasites
Pathogens
Phylogeny
Polymerase Chain Reaction
ribosomal RNA
Rickettsia
Rickettsia - classification
Rickettsia - genetics
Rickettsia - isolation & purification
Rickettsia - pathogenicity
Rickettsia rickettsii
rickettsial diseases
rodents
tick-borne diseases
Tick-Borne Diseases - diagnosis
Tick-Borne Diseases - microbiology
Ticks - microbiology
wild animals
title Tick-Borne Rickettsial Pathogens in Ticks and Small Mammals in Korea
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