Reclassification of Phenotypically Identified Staphylococcus intermedius Strains

• Published in: Journal of Clinical Microbiology 2007-09, Vol.45 (9), p.2770-2778
• Main Authors: Sasaki, Takashi, Kikuchi, Ken, Tanaka, Yoshikazu, Takahashi, Namiko, Kamata, Shinichi, Hiramatsu, Keiichi
• Format: Article
• Language: English
• Subjects: Animal Diseases - microbiology; Animals; Bacterial Proteins - genetics; Bacterial Typing Techniques; Bacteriology; Biological and medical sciences; Cats; Chaperonin 60 - genetics; Cluster Analysis; Columbidae; Disaccharides - metabolism; DNA, Bacterial - chemistry; DNA, Bacterial - genetics; Dogs; Endonucleases - genetics; Fundamental and applied biological sciences. Psychology; Horses; Humans; Hydrolases - analysis; Mannitol - metabolism; Microbiology; Micrococcal Nuclease - genetics; Mink; Miscellaneous; Nucleic Acid Hybridization; Phylogeny; Sequence Analysis, DNA; Staphylococcal Infections - microbiology; Staphylococcal Infections - veterinary; Staphylococcus; Staphylococcus - classification; Staphylococcus - genetics; Staphylococcus - isolation & purification; Staphylococcus - metabolism; Staphylococcus intermedius; Superoxide Dismutase - genetics
• ISSN: 0095-1137; 1098-660X; 1098-5530
• DOI: 10.1128/JCM.00360-07

To reclassify phenotypically identified Staphylococcus intermedius strains, which might include true S. intermedius strains and novel species such as Staphylococcus pseudintermedius and Staphylococcus delphini, we analyzed molecular phylogenies and phenotypic characteristics of 117 S. intermedius group (SIG) strains tentatively identified as being S. intermedius by the Rapid ID32 Staph assay. From phylogenetic analyses of sodA and hsp60 sequences, the SIG strains were divided into three clusters, which belonged to S. pseudintermedius LMG 22219T, S. intermedius ATCC 29663T, and S. delphini LMG 22190T. All the SIG strains from dogs, cats, and humans were identified as being S. pseudintermedius. The wild pigeon strains, except one, were identified as being S. intermedius, and strains from all domestic pigeons, one wild pigeon, horses, and a mink were identified as being S. delphini. In addition, a phylogenetic analysis of nuc genes revealed that S. delphini strains were divided into two clusters: one was the cluster (S. delphini group A) that belonged to S. delphini LMG 22190T, and the other was the cluster (S. delphini group B) that was more related to S. pseudintermedius LMG 22219T than S. delphini LMG 22190T. The DNA-DNA hybridization results showed that S. delphini group B strains were distinguished from S. delphini group A, S. intermedius, and S. pseudintermedius strains. S. intermedius is distinguishable from S. pseudintermedius or S. delphini by positive arginine dihydrolase and acid production from β-gentiobiose and D-mannitol. However, phenotypical characteristics to differentiate S. delphini group A, S. delphini group B, and S. pseudintermedius were not found. In conclusion, SIG strains were reclassified into four clusters with three established and one probably novel species.