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ZIC1 is downregulated through promoter hypermethylation, and functions as a tumor suppressor gene in colorectal cancer
The transcription factor, Zinc finger of the cerebellum (ZIC1), plays a crucial role in vertebrate development. Recently, ZIC1 has also been found to participate in the progression of human cancers, including medulloblastomas, endometrial cancers, and mesenchymal neoplasms. However, the function of...
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Published in: | PloS one 2011-02, Vol.6 (2), p.e16916-e16916 |
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description | The transcription factor, Zinc finger of the cerebellum (ZIC1), plays a crucial role in vertebrate development. Recently, ZIC1 has also been found to participate in the progression of human cancers, including medulloblastomas, endometrial cancers, and mesenchymal neoplasms. However, the function of ZIC1 in colon cancer progression has not been defined. In this study, we demonstrate ZIC1 to be silenced or significantly downregulated in colon cancer cell lines. These effects were reversed by demethylation treatment with 5-aza-2'-deoxycytidine (Aza). ZIC1 expression is also significantly downregulated in primary colorectal cancer tissues relative to adjacent non-tumor tissues (p = 0.0001). Furthermore, methylation of ZIC1 gene promoter is frequently detected in primary tumor tissues (85%, 34/40), but not in adjacent non-tumor tissues. Ectopic expression of ZIC1 suppresses cell proliferation and induces apoptosis, which is associated with MAPK and PI(3)K/Akt pathways, as well as the Bcl-xl/Bad/Caspase3 cascade. To identify target candidates of ZIC1, we employed cDNA microarray and found that 337 genes are downregulated and 95 genes upregulated by ectopic expression of ZIC1, which were verified by 10 selected gene expressions by qRT-PCR. Taken together, our results suggest that ZIC1 may potentially function as a tumor suppressor gene, which is downregulated through promoter hypermethylation in colorectal cancers. |
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Recently, ZIC1 has also been found to participate in the progression of human cancers, including medulloblastomas, endometrial cancers, and mesenchymal neoplasms. However, the function of ZIC1 in colon cancer progression has not been defined. In this study, we demonstrate ZIC1 to be silenced or significantly downregulated in colon cancer cell lines. These effects were reversed by demethylation treatment with 5-aza-2'-deoxycytidine (Aza). ZIC1 expression is also significantly downregulated in primary colorectal cancer tissues relative to adjacent non-tumor tissues (p = 0.0001). Furthermore, methylation of ZIC1 gene promoter is frequently detected in primary tumor tissues (85%, 34/40), but not in adjacent non-tumor tissues. Ectopic expression of ZIC1 suppresses cell proliferation and induces apoptosis, which is associated with MAPK and PI(3)K/Akt pathways, as well as the Bcl-xl/Bad/Caspase3 cascade. To identify target candidates of ZIC1, we employed cDNA microarray and found that 337 genes are downregulated and 95 genes upregulated by ectopic expression of ZIC1, which were verified by 10 selected gene expressions by qRT-PCR. Taken together, our results suggest that ZIC1 may potentially function as a tumor suppressor gene, which is downregulated through promoter hypermethylation in colorectal cancers.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0016916</identifier><identifier>PMID: 21347233</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>1-Phosphatidylinositol 3-kinase ; AKT protein ; Angiogenesis ; Apoptosis ; Apoptosis - genetics ; Bcl-x protein ; Biology ; Biomedical research ; Breast cancer ; Cancer ; Cancer genetics ; Cell Line, Tumor ; Cell Proliferation ; Cerebellum ; Colon ; Colon cancer ; Colorectal cancer ; Colorectal carcinoma ; Colorectal Neoplasms - genetics ; Colorectal Neoplasms - pathology ; Demethylation ; Deoxyribonucleic acid ; Development and progression ; DNA ; DNA binding proteins ; DNA methylation ; DNA Methylation - genetics ; DNA microarrays ; Down-Regulation - genetics ; Ectopic expression ; Endometrial cancer ; Endometrium ; Epigenetics ; Female ; Gastric cancer ; Gastroenterology ; Gene expression ; Gene Silencing ; Genes ; Genes, Tumor Suppressor ; Genetic aspects ; Humans ; Laboratories ; Male ; MAP kinase ; Medicine ; Melanoma ; Mesenchyme ; Metastasis ; Methylation ; Middle Aged ; Neoplasia ; Neoplasms ; Promoter Regions, Genetic - genetics ; Proteins ; Skin cancer ; Stomach cancer ; Target recognition ; Tissues ; Transcription Factors - genetics ; Transcription Factors - metabolism ; Transcriptome - genetics ; Trends ; Tumor cell lines ; Tumor suppressor genes ; Tumors ; Zinc ; Zinc finger proteins</subject><ispartof>PloS one, 2011-02, Vol.6 (2), p.e16916-e16916</ispartof><rights>COPYRIGHT 2011 Public Library of Science</rights><rights>2011 Gan et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Gan et al. 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c757t-ab980f8227ae6baab651def6cada1fedef414ca2ce7aa70f24e3cd4147f6bbb83</citedby><cites>FETCH-LOGICAL-c757t-ab980f8227ae6baab651def6cada1fedef414ca2ce7aa70f24e3cd4147f6bbb83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1292662222/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1292662222?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25732,27903,27904,36991,36992,44569,53769,53771,74872</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21347233$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Agoulnik, Irina</contributor><creatorcontrib>Gan, Lihong</creatorcontrib><creatorcontrib>Chen, Shujie</creatorcontrib><creatorcontrib>Zhong, Jing</creatorcontrib><creatorcontrib>Wang, Xian</creatorcontrib><creatorcontrib>Lam, Emily K Y</creatorcontrib><creatorcontrib>Liu, Xin</creatorcontrib><creatorcontrib>Zhang, Jianbin</creatorcontrib><creatorcontrib>Zhou, Tianhua</creatorcontrib><creatorcontrib>Yu, Jun</creatorcontrib><creatorcontrib>Si, Jianmin</creatorcontrib><creatorcontrib>Wang, Liangjing</creatorcontrib><creatorcontrib>Jin, Hongchuan</creatorcontrib><title>ZIC1 is downregulated through promoter hypermethylation, and functions as a tumor suppressor gene in colorectal cancer</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>The transcription factor, Zinc finger of the cerebellum (ZIC1), plays a crucial role in vertebrate development. Recently, ZIC1 has also been found to participate in the progression of human cancers, including medulloblastomas, endometrial cancers, and mesenchymal neoplasms. However, the function of ZIC1 in colon cancer progression has not been defined. In this study, we demonstrate ZIC1 to be silenced or significantly downregulated in colon cancer cell lines. These effects were reversed by demethylation treatment with 5-aza-2'-deoxycytidine (Aza). ZIC1 expression is also significantly downregulated in primary colorectal cancer tissues relative to adjacent non-tumor tissues (p = 0.0001). Furthermore, methylation of ZIC1 gene promoter is frequently detected in primary tumor tissues (85%, 34/40), but not in adjacent non-tumor tissues. Ectopic expression of ZIC1 suppresses cell proliferation and induces apoptosis, which is associated with MAPK and PI(3)K/Akt pathways, as well as the Bcl-xl/Bad/Caspase3 cascade. To identify target candidates of ZIC1, we employed cDNA microarray and found that 337 genes are downregulated and 95 genes upregulated by ectopic expression of ZIC1, which were verified by 10 selected gene expressions by qRT-PCR. Taken together, our results suggest that ZIC1 may potentially function as a tumor suppressor gene, which is downregulated through promoter hypermethylation in colorectal cancers.</description><subject>1-Phosphatidylinositol 3-kinase</subject><subject>AKT protein</subject><subject>Angiogenesis</subject><subject>Apoptosis</subject><subject>Apoptosis - genetics</subject><subject>Bcl-x protein</subject><subject>Biology</subject><subject>Biomedical research</subject><subject>Breast cancer</subject><subject>Cancer</subject><subject>Cancer genetics</subject><subject>Cell Line, Tumor</subject><subject>Cell Proliferation</subject><subject>Cerebellum</subject><subject>Colon</subject><subject>Colon cancer</subject><subject>Colorectal cancer</subject><subject>Colorectal carcinoma</subject><subject>Colorectal Neoplasms - genetics</subject><subject>Colorectal Neoplasms - pathology</subject><subject>Demethylation</subject><subject>Deoxyribonucleic acid</subject><subject>Development and progression</subject><subject>DNA</subject><subject>DNA binding proteins</subject><subject>DNA methylation</subject><subject>DNA Methylation - genetics</subject><subject>DNA microarrays</subject><subject>Down-Regulation - genetics</subject><subject>Ectopic expression</subject><subject>Endometrial cancer</subject><subject>Endometrium</subject><subject>Epigenetics</subject><subject>Female</subject><subject>Gastric cancer</subject><subject>Gastroenterology</subject><subject>Gene expression</subject><subject>Gene Silencing</subject><subject>Genes</subject><subject>Genes, Tumor Suppressor</subject><subject>Genetic aspects</subject><subject>Humans</subject><subject>Laboratories</subject><subject>Male</subject><subject>MAP kinase</subject><subject>Medicine</subject><subject>Melanoma</subject><subject>Mesenchyme</subject><subject>Metastasis</subject><subject>Methylation</subject><subject>Middle Aged</subject><subject>Neoplasia</subject><subject>Neoplasms</subject><subject>Promoter Regions, Genetic - genetics</subject><subject>Proteins</subject><subject>Skin cancer</subject><subject>Stomach cancer</subject><subject>Target recognition</subject><subject>Tissues</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - metabolism</subject><subject>Transcriptome - genetics</subject><subject>Trends</subject><subject>Tumor cell lines</subject><subject>Tumor suppressor genes</subject><subject>Tumors</subject><subject>Zinc</subject><subject>Zinc finger proteins</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk1uL1DAUx4so7rr6DUQDgiI4Y9Kk6fRFWAYvAwsL3h58Cafp6WVok26Srs63N7Mzu8zIPtgUcnLyO_8kJzlJ8pzROeM5e7-2kzPQz0drcE4pkwWTD5JTVvB0JlPKHx7YJ8kT79eUZnwh5ePkJGVc5Cnnp8n1r9WSkc6Tyv42Dpuph4AVCa2zU9OS0dnBBnSk3YzoBgztJgKdNe8ImIrUk9HbkScQfxKmwTrip3F06H00GzRIOkO07a1DHaAnGoxG9zR5VEPv8dm-P0t-fPr4fflldnH5ebU8v5jpPMvDDMpiQetFmuaAsgQoZcYqrKWGCliN0RRMaEg15gA5rVOBXFfRl9eyLMsFP0te7nTH3nq1T5lXLC1SKdP4RWK1IyoLazW6bgC3URY6deOwrlHgQqd7VJWUmJUo0goyUZRZIdiiokKXmYj7lDpqfdivNpUDVhpNcNAfiR7PmK5Vjb1WnPJCZjwKvNkLOHs1oQ9q6LzGvgeDdvJqkfGiEJRuyVf_kPcfbk81EPffmdrGZfVWU52LXBZUCEkjNb-Hiq3CodPxedVd9B8FvD0KiEzAP6GByXu1-vb1_9nLn8fs6wO2RehD620_3TyxY1DsQO2s9w7ruxwzqrbVcZsNta0Ota-OGPbi8H7ugm7Lgf8FkDgNhA</recordid><startdate>20110215</startdate><enddate>20110215</enddate><creator>Gan, Lihong</creator><creator>Chen, Shujie</creator><creator>Zhong, Jing</creator><creator>Wang, Xian</creator><creator>Lam, Emily K Y</creator><creator>Liu, Xin</creator><creator>Zhang, Jianbin</creator><creator>Zhou, Tianhua</creator><creator>Yu, Jun</creator><creator>Si, Jianmin</creator><creator>Wang, Liangjing</creator><creator>Jin, Hongchuan</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20110215</creationdate><title>ZIC1 is downregulated through promoter hypermethylation, and functions as a tumor suppressor gene in colorectal cancer</title><author>Gan, Lihong ; Chen, Shujie ; Zhong, Jing ; Wang, Xian ; Lam, Emily K Y ; Liu, Xin ; Zhang, Jianbin ; Zhou, Tianhua ; Yu, Jun ; Si, Jianmin ; Wang, Liangjing ; Jin, Hongchuan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c757t-ab980f8227ae6baab651def6cada1fedef414ca2ce7aa70f24e3cd4147f6bbb83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>1-Phosphatidylinositol 3-kinase</topic><topic>AKT protein</topic><topic>Angiogenesis</topic><topic>Apoptosis</topic><topic>Apoptosis - 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Recently, ZIC1 has also been found to participate in the progression of human cancers, including medulloblastomas, endometrial cancers, and mesenchymal neoplasms. However, the function of ZIC1 in colon cancer progression has not been defined. In this study, we demonstrate ZIC1 to be silenced or significantly downregulated in colon cancer cell lines. These effects were reversed by demethylation treatment with 5-aza-2'-deoxycytidine (Aza). ZIC1 expression is also significantly downregulated in primary colorectal cancer tissues relative to adjacent non-tumor tissues (p = 0.0001). Furthermore, methylation of ZIC1 gene promoter is frequently detected in primary tumor tissues (85%, 34/40), but not in adjacent non-tumor tissues. Ectopic expression of ZIC1 suppresses cell proliferation and induces apoptosis, which is associated with MAPK and PI(3)K/Akt pathways, as well as the Bcl-xl/Bad/Caspase3 cascade. To identify target candidates of ZIC1, we employed cDNA microarray and found that 337 genes are downregulated and 95 genes upregulated by ectopic expression of ZIC1, which were verified by 10 selected gene expressions by qRT-PCR. Taken together, our results suggest that ZIC1 may potentially function as a tumor suppressor gene, which is downregulated through promoter hypermethylation in colorectal cancers.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>21347233</pmid><doi>10.1371/journal.pone.0016916</doi><tpages>e16916</tpages><oa>free_for_read</oa></addata></record> |
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language | eng |
recordid | cdi_plos_journals_1292662222 |
source | Open Access: PubMed Central; Publicly Available Content (ProQuest) |
subjects | 1-Phosphatidylinositol 3-kinase AKT protein Angiogenesis Apoptosis Apoptosis - genetics Bcl-x protein Biology Biomedical research Breast cancer Cancer Cancer genetics Cell Line, Tumor Cell Proliferation Cerebellum Colon Colon cancer Colorectal cancer Colorectal carcinoma Colorectal Neoplasms - genetics Colorectal Neoplasms - pathology Demethylation Deoxyribonucleic acid Development and progression DNA DNA binding proteins DNA methylation DNA Methylation - genetics DNA microarrays Down-Regulation - genetics Ectopic expression Endometrial cancer Endometrium Epigenetics Female Gastric cancer Gastroenterology Gene expression Gene Silencing Genes Genes, Tumor Suppressor Genetic aspects Humans Laboratories Male MAP kinase Medicine Melanoma Mesenchyme Metastasis Methylation Middle Aged Neoplasia Neoplasms Promoter Regions, Genetic - genetics Proteins Skin cancer Stomach cancer Target recognition Tissues Transcription Factors - genetics Transcription Factors - metabolism Transcriptome - genetics Trends Tumor cell lines Tumor suppressor genes Tumors Zinc Zinc finger proteins |
title | ZIC1 is downregulated through promoter hypermethylation, and functions as a tumor suppressor gene in colorectal cancer |
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