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Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli
Lactobacillus ruminis is one of at least twelve motile but poorly characterized species found in the genus Lactobacillus. Of these, only L. ruminis has been isolated from mammals, and this species may be considered as an autochthonous member of the gastrointestinal microbiota of humans, pigs and cow...
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Published in: | PloS one 2012-07, Vol.7 (7), p.e40592-e40592 |
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description | Lactobacillus ruminis is one of at least twelve motile but poorly characterized species found in the genus Lactobacillus. Of these, only L. ruminis has been isolated from mammals, and this species may be considered as an autochthonous member of the gastrointestinal microbiota of humans, pigs and cows. Nine L. ruminis strains were investigated here to elucidate the biochemistry and genetics of Lactobacillus motility. Six strains isolated from humans were non-motile while three bovine isolates were motile. A complete set of flagellum biogenesis genes was annotated in the sequenced genomes of two strains, ATCC25644 (human isolate) and ATCC27782 (bovine isolate), but only the latter strain produced flagella. Comparison of the L. ruminis and L. mali DSM20444(T) motility loci showed that their genetic content and gene-order were broadly similar, although the L. mali motility locus was interrupted by an 11.8 Kb region encoding rhamnose utilization genes that is absent from the L. ruminis motility locus. Phylogenetic analysis of 39 motile bacteria indicated that Lactobacillus motility genes were most closely related to those of motile carnobacteria and enterococci. Transcriptome analysis revealed that motility genes were transcribed at a significantly higher level in motile L. ruminis ATCC27782 than in non-motile ATCC25644. Flagellin proteins were isolated from L. ruminis ATCC27782 and from three other Lactobacillus species, while recombinant flagellin of aflagellate L. ruminis ATCC25644 was expressed and purified from E. coli. These native and recombinant Lactobacillus flagellins, and also flagellate L. ruminis cells, triggered interleukin-8 production in cultured human intestinal epithelial cells in a manner suppressed by short interfering RNA directed against Toll-Like Receptor 5. This study provides genetic, transcriptomic, phylogenetic and immunological insights into the trait of flagellum-mediated motility in the lactobacilli. |
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Of these, only L. ruminis has been isolated from mammals, and this species may be considered as an autochthonous member of the gastrointestinal microbiota of humans, pigs and cows. Nine L. ruminis strains were investigated here to elucidate the biochemistry and genetics of Lactobacillus motility. Six strains isolated from humans were non-motile while three bovine isolates were motile. A complete set of flagellum biogenesis genes was annotated in the sequenced genomes of two strains, ATCC25644 (human isolate) and ATCC27782 (bovine isolate), but only the latter strain produced flagella. Comparison of the L. ruminis and L. mali DSM20444(T) motility loci showed that their genetic content and gene-order were broadly similar, although the L. mali motility locus was interrupted by an 11.8 Kb region encoding rhamnose utilization genes that is absent from the L. ruminis motility locus. Phylogenetic analysis of 39 motile bacteria indicated that Lactobacillus motility genes were most closely related to those of motile carnobacteria and enterococci. Transcriptome analysis revealed that motility genes were transcribed at a significantly higher level in motile L. ruminis ATCC27782 than in non-motile ATCC25644. Flagellin proteins were isolated from L. ruminis ATCC27782 and from three other Lactobacillus species, while recombinant flagellin of aflagellate L. ruminis ATCC25644 was expressed and purified from E. coli. These native and recombinant Lactobacillus flagellins, and also flagellate L. ruminis cells, triggered interleukin-8 production in cultured human intestinal epithelial cells in a manner suppressed by short interfering RNA directed against Toll-Like Receptor 5. This study provides genetic, transcriptomic, phylogenetic and immunological insights into the trait of flagellum-mediated motility in the lactobacilli.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0040592</identifier><identifier>PMID: 22808200</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Algorithms ; Analysis ; Animals ; Antigens ; Biochemistry ; Biology ; Biosynthesis ; Campylobacter ; Campylobacter jejuni ; Cattle ; Cladistic analysis ; E coli ; Electrophoresis, Polyacrylamide Gel ; Enterocytes - metabolism ; Epithelial cells ; Flagella ; Flagella - metabolism ; Flagella - ultrastructure ; Flagellin ; Flagellin - genetics ; Flagellin - isolation & purification ; Flagellin - metabolism ; Gene expression ; Genes ; Genes, Bacterial - genetics ; Genetics ; Genomes ; Genomics ; Homeostasis ; HT29 Cells ; Humans ; Immune system ; Immunology ; Inflammation ; Inflammation Mediators - metabolism ; Interleukin 8 ; Interleukin-8 - secretion ; Intestine ; Lactobacilli ; Lactobacillus ; Lactobacillus - cytology ; Lactobacillus - genetics ; Lactobacillus - metabolism ; Lactobacillus - ultrastructure ; Loci ; Mice ; Microbiota ; Microbiota (Symbiotic organisms) ; Molecular Sequence Annotation ; Motility ; Movement ; Pathogens ; Phylogeny ; Pigs ; Proteins ; Recombination, Genetic - genetics ; Rhamnose ; Ribonucleic acid ; RNA ; Salmonella ; siRNA ; Species ; Species Specificity ; Strains (organisms) ; Swine ; Toll-Like Receptor 5 - metabolism ; Toll-like receptors ; Weissella ; Zebrafish</subject><ispartof>PloS one, 2012-07, Vol.7 (7), p.e40592-e40592</ispartof><rights>COPYRIGHT 2012 Public Library of Science</rights><rights>2012 Neville et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Neville et al. 2012</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c758t-1e10732170ec218f0aff5a4201a63919f8efd81932849a4d3e8fadd0cc0b50933</citedby><cites>FETCH-LOGICAL-c758t-1e10732170ec218f0aff5a4201a63919f8efd81932849a4d3e8fadd0cc0b50933</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1325437302/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1325437302?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22808200$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Planet, Paul J.</contributor><creatorcontrib>Neville, B Anne</creatorcontrib><creatorcontrib>Forde, Brian M</creatorcontrib><creatorcontrib>Claesson, Marcus J</creatorcontrib><creatorcontrib>Darby, Trevor</creatorcontrib><creatorcontrib>Coghlan, Avril</creatorcontrib><creatorcontrib>Nally, Kenneth</creatorcontrib><creatorcontrib>Ross, R Paul</creatorcontrib><creatorcontrib>O'Toole, Paul W</creatorcontrib><title>Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Lactobacillus ruminis is one of at least twelve motile but poorly characterized species found in the genus Lactobacillus. Of these, only L. ruminis has been isolated from mammals, and this species may be considered as an autochthonous member of the gastrointestinal microbiota of humans, pigs and cows. Nine L. ruminis strains were investigated here to elucidate the biochemistry and genetics of Lactobacillus motility. Six strains isolated from humans were non-motile while three bovine isolates were motile. A complete set of flagellum biogenesis genes was annotated in the sequenced genomes of two strains, ATCC25644 (human isolate) and ATCC27782 (bovine isolate), but only the latter strain produced flagella. Comparison of the L. ruminis and L. mali DSM20444(T) motility loci showed that their genetic content and gene-order were broadly similar, although the L. mali motility locus was interrupted by an 11.8 Kb region encoding rhamnose utilization genes that is absent from the L. ruminis motility locus. Phylogenetic analysis of 39 motile bacteria indicated that Lactobacillus motility genes were most closely related to those of motile carnobacteria and enterococci. Transcriptome analysis revealed that motility genes were transcribed at a significantly higher level in motile L. ruminis ATCC27782 than in non-motile ATCC25644. Flagellin proteins were isolated from L. ruminis ATCC27782 and from three other Lactobacillus species, while recombinant flagellin of aflagellate L. ruminis ATCC25644 was expressed and purified from E. coli. These native and recombinant Lactobacillus flagellins, and also flagellate L. ruminis cells, triggered interleukin-8 production in cultured human intestinal epithelial cells in a manner suppressed by short interfering RNA directed against Toll-Like Receptor 5. This study provides genetic, transcriptomic, phylogenetic and immunological insights into the trait of flagellum-mediated motility in the lactobacilli.</description><subject>Algorithms</subject><subject>Analysis</subject><subject>Animals</subject><subject>Antigens</subject><subject>Biochemistry</subject><subject>Biology</subject><subject>Biosynthesis</subject><subject>Campylobacter</subject><subject>Campylobacter jejuni</subject><subject>Cattle</subject><subject>Cladistic analysis</subject><subject>E coli</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Enterocytes - metabolism</subject><subject>Epithelial cells</subject><subject>Flagella</subject><subject>Flagella - metabolism</subject><subject>Flagella - ultrastructure</subject><subject>Flagellin</subject><subject>Flagellin - genetics</subject><subject>Flagellin - isolation & purification</subject><subject>Flagellin - metabolism</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Genes, Bacterial - genetics</subject><subject>Genetics</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Homeostasis</subject><subject>HT29 Cells</subject><subject>Humans</subject><subject>Immune system</subject><subject>Immunology</subject><subject>Inflammation</subject><subject>Inflammation Mediators - metabolism</subject><subject>Interleukin 8</subject><subject>Interleukin-8 - secretion</subject><subject>Intestine</subject><subject>Lactobacilli</subject><subject>Lactobacillus</subject><subject>Lactobacillus - cytology</subject><subject>Lactobacillus - genetics</subject><subject>Lactobacillus - metabolism</subject><subject>Lactobacillus - ultrastructure</subject><subject>Loci</subject><subject>Mice</subject><subject>Microbiota</subject><subject>Microbiota (Symbiotic organisms)</subject><subject>Molecular Sequence Annotation</subject><subject>Motility</subject><subject>Movement</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Pigs</subject><subject>Proteins</subject><subject>Recombination, Genetic - genetics</subject><subject>Rhamnose</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Salmonella</subject><subject>siRNA</subject><subject>Species</subject><subject>Species Specificity</subject><subject>Strains (organisms)</subject><subject>Swine</subject><subject>Toll-Like Receptor 5 - metabolism</subject><subject>Toll-like receptors</subject><subject>Weissella</subject><subject>Zebrafish</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk9-L1DAQx4so3nn6H4gWBNGHXfOrbfoiHIs_FhYO_PUapkm6myNt9pJUXP96U7d3bOUeJA8Zks98JzOTybLnGC0xrfC7azf4Huxy73q9RIihoiYPsnNcU7IoCaIPT-yz7EkI1wgVlJfl4-yMEI44Qeg8O6x24EFG7c1viMb1uWvzvXcL07cWug6i84c8mVttrenHq6hNH0ZDDVKrvDnkmyTgGpDG2iHkfuhMb0IOvcq9thAT1LlorD4FzdPsUQs26GfTfpF9__jh2-rzYnP1ab263CxkVfC4wBqjihJcIS0J5i2Cti2AEYShpDWuW65bxcdMOauBKap5C0ohKVFToJrSi-zlUXdvXRBT1YLAlBSMVhSRRKyPhHJwLfbedOAPwoERfw-c3wrw0UirBYGq5UWpaqk0Q4A4NBoDqyrOSgZNlbTeT9GGptNK6j56sDPR-U1vdmLrfgpKa1rWLAm8mQS8uxl0iKIzQabiQ6_dkN6NSIUYqYsx1qt_0Puzm6gtpARSW12KK0dRcZkejjFlnCdqeQ-VltKdkemLtal_c4e3M4fERP0rbmEIQay_fvl_9urHnH19wu402LgLzg7j3wxzkB1B6V0IXrd3RcZIjBNyWw0xToiYJiS5vTht0J3T7UjQPwpCDWg</recordid><startdate>20120710</startdate><enddate>20120710</enddate><creator>Neville, B Anne</creator><creator>Forde, Brian M</creator><creator>Claesson, Marcus J</creator><creator>Darby, Trevor</creator><creator>Coghlan, Avril</creator><creator>Nally, Kenneth</creator><creator>Ross, R Paul</creator><creator>O'Toole, Paul W</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20120710</creationdate><title>Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli</title><author>Neville, B Anne ; Forde, Brian M ; Claesson, Marcus J ; Darby, Trevor ; Coghlan, Avril ; Nally, Kenneth ; Ross, R Paul ; O'Toole, Paul W</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c758t-1e10732170ec218f0aff5a4201a63919f8efd81932849a4d3e8fadd0cc0b50933</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Algorithms</topic><topic>Analysis</topic><topic>Animals</topic><topic>Antigens</topic><topic>Biochemistry</topic><topic>Biology</topic><topic>Biosynthesis</topic><topic>Campylobacter</topic><topic>Campylobacter jejuni</topic><topic>Cattle</topic><topic>Cladistic analysis</topic><topic>E coli</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Enterocytes - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Neville, B Anne</au><au>Forde, Brian M</au><au>Claesson, Marcus J</au><au>Darby, Trevor</au><au>Coghlan, Avril</au><au>Nally, Kenneth</au><au>Ross, R Paul</au><au>O'Toole, Paul W</au><au>Planet, Paul J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2012-07-10</date><risdate>2012</risdate><volume>7</volume><issue>7</issue><spage>e40592</spage><epage>e40592</epage><pages>e40592-e40592</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Lactobacillus ruminis is one of at least twelve motile but poorly characterized species found in the genus Lactobacillus. Of these, only L. ruminis has been isolated from mammals, and this species may be considered as an autochthonous member of the gastrointestinal microbiota of humans, pigs and cows. Nine L. ruminis strains were investigated here to elucidate the biochemistry and genetics of Lactobacillus motility. Six strains isolated from humans were non-motile while three bovine isolates were motile. A complete set of flagellum biogenesis genes was annotated in the sequenced genomes of two strains, ATCC25644 (human isolate) and ATCC27782 (bovine isolate), but only the latter strain produced flagella. Comparison of the L. ruminis and L. mali DSM20444(T) motility loci showed that their genetic content and gene-order were broadly similar, although the L. mali motility locus was interrupted by an 11.8 Kb region encoding rhamnose utilization genes that is absent from the L. ruminis motility locus. Phylogenetic analysis of 39 motile bacteria indicated that Lactobacillus motility genes were most closely related to those of motile carnobacteria and enterococci. Transcriptome analysis revealed that motility genes were transcribed at a significantly higher level in motile L. ruminis ATCC27782 than in non-motile ATCC25644. Flagellin proteins were isolated from L. ruminis ATCC27782 and from three other Lactobacillus species, while recombinant flagellin of aflagellate L. ruminis ATCC25644 was expressed and purified from E. coli. These native and recombinant Lactobacillus flagellins, and also flagellate L. ruminis cells, triggered interleukin-8 production in cultured human intestinal epithelial cells in a manner suppressed by short interfering RNA directed against Toll-Like Receptor 5. This study provides genetic, transcriptomic, phylogenetic and immunological insights into the trait of flagellum-mediated motility in the lactobacilli.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>22808200</pmid><doi>10.1371/journal.pone.0040592</doi><tpages>e40592</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2012-07, Vol.7 (7), p.e40592-e40592 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1325437302 |
source | PubMed (Medline); Publicly Available Content Database |
subjects | Algorithms Analysis Animals Antigens Biochemistry Biology Biosynthesis Campylobacter Campylobacter jejuni Cattle Cladistic analysis E coli Electrophoresis, Polyacrylamide Gel Enterocytes - metabolism Epithelial cells Flagella Flagella - metabolism Flagella - ultrastructure Flagellin Flagellin - genetics Flagellin - isolation & purification Flagellin - metabolism Gene expression Genes Genes, Bacterial - genetics Genetics Genomes Genomics Homeostasis HT29 Cells Humans Immune system Immunology Inflammation Inflammation Mediators - metabolism Interleukin 8 Interleukin-8 - secretion Intestine Lactobacilli Lactobacillus Lactobacillus - cytology Lactobacillus - genetics Lactobacillus - metabolism Lactobacillus - ultrastructure Loci Mice Microbiota Microbiota (Symbiotic organisms) Molecular Sequence Annotation Motility Movement Pathogens Phylogeny Pigs Proteins Recombination, Genetic - genetics Rhamnose Ribonucleic acid RNA Salmonella siRNA Species Species Specificity Strains (organisms) Swine Toll-Like Receptor 5 - metabolism Toll-like receptors Weissella Zebrafish |
title | Characterization of pro-inflammatory flagellin proteins produced by Lactobacillus ruminis and related motile Lactobacilli |
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