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Mutational spectrum of semaphorin 3A and semaphorin 3D genes in Spanish Hirschsprung patients
Hirschsprung disease (HSCR, OMIM 142623) is a developmental disorder characterized by the absence of ganglion cells along variable lengths of the distal gastrointestinal tract, which results in tonic contraction of the aganglionic colon segment and functional intestinal obstruction. The RET proto-on...
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Published in: | PloS one 2013-01, Vol.8 (1), p.e54800-e54800 |
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description | Hirschsprung disease (HSCR, OMIM 142623) is a developmental disorder characterized by the absence of ganglion cells along variable lengths of the distal gastrointestinal tract, which results in tonic contraction of the aganglionic colon segment and functional intestinal obstruction. The RET proto-oncogene is the major gene associated to HSCR with differential contributions of its rare and common, coding and noncoding mutations to the multifactorial nature of this pathology. In addition, many other genes have been described to be associated with this pathology, including the semaphorins class III genes SEMA3A (7p12.1) and SEMA3D (7q21.11) through SNP array analyses and by next-generation sequencing technologies. Semaphorins are guidance cues for developing neurons implicated in the axonal projections and in the determination of the migratory pathway for neural-crest derived neural precursors during enteric nervous system development. In addition, it has been described that increased SEMA3A expression may be a risk factor for HSCR through the upregulation of the gene in the aganglionic smooth muscle layer of the colon in HSCR patients. Here we present the results of a comprehensive analysis of SEMA3A and SEMA3D in a series of 200 Spanish HSCR patients by the mutational screening of its coding sequence, which has led to find a number of potentially deleterious variants. RET mutations have been also detected in some of those patients carrying SEMAs variants. We have evaluated the A131T-SEMA3A, S598G-SEMA3A and E198K-SEMA3D mutations using colon tissue sections of these patients by immunohistochemistry. All mutants presented increased protein expression in smooth muscle layer of ganglionic segments. Moreover, A131T-SEMA3A also maintained higher protein levels in the aganglionic muscle layers. These findings strongly suggest that these mutants have a pathogenic effect on the disease. Furthermore, because of their coexistence with RET mutations, our data substantiate the additive genetic model proposed for this rare disorder and further support the association of SEMAs genes with HSCR. |
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The RET proto-oncogene is the major gene associated to HSCR with differential contributions of its rare and common, coding and noncoding mutations to the multifactorial nature of this pathology. In addition, many other genes have been described to be associated with this pathology, including the semaphorins class III genes SEMA3A (7p12.1) and SEMA3D (7q21.11) through SNP array analyses and by next-generation sequencing technologies. Semaphorins are guidance cues for developing neurons implicated in the axonal projections and in the determination of the migratory pathway for neural-crest derived neural precursors during enteric nervous system development. In addition, it has been described that increased SEMA3A expression may be a risk factor for HSCR through the upregulation of the gene in the aganglionic smooth muscle layer of the colon in HSCR patients. Here we present the results of a comprehensive analysis of SEMA3A and SEMA3D in a series of 200 Spanish HSCR patients by the mutational screening of its coding sequence, which has led to find a number of potentially deleterious variants. RET mutations have been also detected in some of those patients carrying SEMAs variants. We have evaluated the A131T-SEMA3A, S598G-SEMA3A and E198K-SEMA3D mutations using colon tissue sections of these patients by immunohistochemistry. All mutants presented increased protein expression in smooth muscle layer of ganglionic segments. Moreover, A131T-SEMA3A also maintained higher protein levels in the aganglionic muscle layers. These findings strongly suggest that these mutants have a pathogenic effect on the disease. Furthermore, because of their coexistence with RET mutations, our data substantiate the additive genetic model proposed for this rare disorder and further support the association of SEMAs genes with HSCR.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0054800</identifier><identifier>PMID: 23372769</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Axon guidance ; Biology ; Birth defects ; Chromosome 7 ; Coding ; Colon ; Colon - metabolism ; Colon - pathology ; Contraction ; Cues ; Developmental disabilities ; Disease ; Enteric nervous system ; European Continental Ancestry Group - genetics ; Female ; Ganglion cells ; Gastrointestinal diseases ; Gastrointestinal system ; Gastrointestinal tract ; Genes ; Genetic aspects ; Genetics ; Genomes ; Haplotypes ; Hirschsprung Disease - genetics ; Hirschsprung Disease - metabolism ; Hirschsprung's disease ; Hospitals ; Humans ; Immunohistochemistry ; Intestine ; Kinases ; Male ; Medicine ; Muscles ; Mutants ; Mutation ; Nervous system ; Neural stem cells ; Non-coding RNA ; Pathogenesis ; Pathology ; Patients ; Proto-Oncogene Proteins c-ret - genetics ; Proto-Oncogene Proteins c-ret - metabolism ; Ret protein ; Risk factors ; Semaphorin-3A - genetics ; Semaphorin-3A - metabolism ; Semaphorins ; Sequences ; Single-nucleotide polymorphism ; Smooth muscle ; Spain ; Studies</subject><ispartof>PloS one, 2013-01, Vol.8 (1), p.e54800-e54800</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Luzón-Toro et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Luzón-Toro et al 2013 Luzón-Toro et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c758t-1fc8c1f601fe236317815e15c97983d5b66eea8ad9554d64c1e153f2a591dd2d3</citedby><cites>FETCH-LOGICAL-c758t-1fc8c1f601fe236317815e15c97983d5b66eea8ad9554d64c1e153f2a591dd2d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1327868812/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1327868812?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23372769$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Luzón-Toro, Berta</creatorcontrib><creatorcontrib>Fernández, Raquel M</creatorcontrib><creatorcontrib>Torroglosa, Ana</creatorcontrib><creatorcontrib>de Agustín, Juan Carlos</creatorcontrib><creatorcontrib>Méndez-Vidal, Cristina</creatorcontrib><creatorcontrib>Segura, Dolores Isabel</creatorcontrib><creatorcontrib>Antiñolo, Guillermo</creatorcontrib><creatorcontrib>Borrego, Salud</creatorcontrib><title>Mutational spectrum of semaphorin 3A and semaphorin 3D genes in Spanish Hirschsprung patients</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Hirschsprung disease (HSCR, OMIM 142623) is a developmental disorder characterized by the absence of ganglion cells along variable lengths of the distal gastrointestinal tract, which results in tonic contraction of the aganglionic colon segment and functional intestinal obstruction. The RET proto-oncogene is the major gene associated to HSCR with differential contributions of its rare and common, coding and noncoding mutations to the multifactorial nature of this pathology. In addition, many other genes have been described to be associated with this pathology, including the semaphorins class III genes SEMA3A (7p12.1) and SEMA3D (7q21.11) through SNP array analyses and by next-generation sequencing technologies. Semaphorins are guidance cues for developing neurons implicated in the axonal projections and in the determination of the migratory pathway for neural-crest derived neural precursors during enteric nervous system development. In addition, it has been described that increased SEMA3A expression may be a risk factor for HSCR through the upregulation of the gene in the aganglionic smooth muscle layer of the colon in HSCR patients. Here we present the results of a comprehensive analysis of SEMA3A and SEMA3D in a series of 200 Spanish HSCR patients by the mutational screening of its coding sequence, which has led to find a number of potentially deleterious variants. RET mutations have been also detected in some of those patients carrying SEMAs variants. We have evaluated the A131T-SEMA3A, S598G-SEMA3A and E198K-SEMA3D mutations using colon tissue sections of these patients by immunohistochemistry. All mutants presented increased protein expression in smooth muscle layer of ganglionic segments. Moreover, A131T-SEMA3A also maintained higher protein levels in the aganglionic muscle layers. These findings strongly suggest that these mutants have a pathogenic effect on the disease. Furthermore, because of their coexistence with RET mutations, our data substantiate the additive genetic model proposed for this rare disorder and further support the association of SEMAs genes with HSCR.</description><subject>Analysis</subject><subject>Axon guidance</subject><subject>Biology</subject><subject>Birth defects</subject><subject>Chromosome 7</subject><subject>Coding</subject><subject>Colon</subject><subject>Colon - metabolism</subject><subject>Colon - pathology</subject><subject>Contraction</subject><subject>Cues</subject><subject>Developmental disabilities</subject><subject>Disease</subject><subject>Enteric nervous system</subject><subject>European Continental Ancestry Group - genetics</subject><subject>Female</subject><subject>Ganglion cells</subject><subject>Gastrointestinal diseases</subject><subject>Gastrointestinal system</subject><subject>Gastrointestinal tract</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetics</subject><subject>Genomes</subject><subject>Haplotypes</subject><subject>Hirschsprung Disease - genetics</subject><subject>Hirschsprung Disease - metabolism</subject><subject>Hirschsprung's disease</subject><subject>Hospitals</subject><subject>Humans</subject><subject>Immunohistochemistry</subject><subject>Intestine</subject><subject>Kinases</subject><subject>Male</subject><subject>Medicine</subject><subject>Muscles</subject><subject>Mutants</subject><subject>Mutation</subject><subject>Nervous system</subject><subject>Neural stem cells</subject><subject>Non-coding RNA</subject><subject>Pathogenesis</subject><subject>Pathology</subject><subject>Patients</subject><subject>Proto-Oncogene Proteins c-ret - genetics</subject><subject>Proto-Oncogene Proteins c-ret - metabolism</subject><subject>Ret protein</subject><subject>Risk factors</subject><subject>Semaphorin-3A - genetics</subject><subject>Semaphorin-3A - metabolism</subject><subject>Semaphorins</subject><subject>Sequences</subject><subject>Single-nucleotide polymorphism</subject><subject>Smooth muscle</subject><subject>Spain</subject><subject>Studies</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk9-L1DAQx4so3nn6H4gWBNGHXZtM86MvwnL-uIWTA099k5BN0zZLm9SkFf3vTd3esZV7kDwkTD7zncxkJkmeomyNgKE3ezd6K9t176xeZxnJeZbdS05RAXhFcQb3j84nyaMQ9hECTunD5AQDMMxocZp8_zQOcjAuKqWh12rwY5e6Kg26k33jvLEpbFJpy4XlXVprq0Maz9e9tCY06YXxQTWh96Ot0z5KajuEx8mDSrZBP5n3s-Trh_dfzi9Wl1cft-eby5VihA8rVCmuUEUzVGkMFBDjiGhEVMEKDiXZUaq15LIsCMlLmisUL6HCkhSoLHEJZ8nzg27fuiDmygSBADNOOUc4EtsDUTq5F703nfS_hZNG_DU4XwvpB6NaLaDSBaCcKLzDOexgxwuSoyy-ClPCgEWtt3O0cdfpUsVMvWwXossbaxpRu58CCIGM0Cjwahbw7seowyA6E5RuW2m1G-O7MZ_-h7AJffEPend2M1XLmICxlYtx1SQqNnksZs4ZyyO1voOKq9SdUbGNKhPtC4fXC4fIDPrXUMsxBLG9_vz_7NW3JfvyiG20bIcmuHac-jAswfwAKu9C8Lq6LTLKxDQFN9UQ0xSIeQqi27PjD7p1uml7-AOyTACa</recordid><startdate>20130123</startdate><enddate>20130123</enddate><creator>Luzón-Toro, Berta</creator><creator>Fernández, Raquel M</creator><creator>Torroglosa, Ana</creator><creator>de Agustín, Juan Carlos</creator><creator>Méndez-Vidal, Cristina</creator><creator>Segura, Dolores Isabel</creator><creator>Antiñolo, Guillermo</creator><creator>Borrego, Salud</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130123</creationdate><title>Mutational spectrum of semaphorin 3A and semaphorin 3D genes in Spanish Hirschsprung patients</title><author>Luzón-Toro, Berta ; Fernández, Raquel M ; Torroglosa, Ana ; de Agustín, Juan Carlos ; Méndez-Vidal, Cristina ; Segura, Dolores Isabel ; Antiñolo, Guillermo ; Borrego, Salud</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c758t-1fc8c1f601fe236317815e15c97983d5b66eea8ad9554d64c1e153f2a591dd2d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Analysis</topic><topic>Axon guidance</topic><topic>Biology</topic><topic>Birth defects</topic><topic>Chromosome 7</topic><topic>Coding</topic><topic>Colon</topic><topic>Colon - metabolism</topic><topic>Colon - pathology</topic><topic>Contraction</topic><topic>Cues</topic><topic>Developmental disabilities</topic><topic>Disease</topic><topic>Enteric nervous system</topic><topic>European Continental Ancestry Group - genetics</topic><topic>Female</topic><topic>Ganglion cells</topic><topic>Gastrointestinal diseases</topic><topic>Gastrointestinal system</topic><topic>Gastrointestinal tract</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genetics</topic><topic>Genomes</topic><topic>Haplotypes</topic><topic>Hirschsprung Disease - genetics</topic><topic>Hirschsprung Disease - metabolism</topic><topic>Hirschsprung's disease</topic><topic>Hospitals</topic><topic>Humans</topic><topic>Immunohistochemistry</topic><topic>Intestine</topic><topic>Kinases</topic><topic>Male</topic><topic>Medicine</topic><topic>Muscles</topic><topic>Mutants</topic><topic>Mutation</topic><topic>Nervous system</topic><topic>Neural stem cells</topic><topic>Non-coding RNA</topic><topic>Pathogenesis</topic><topic>Pathology</topic><topic>Patients</topic><topic>Proto-Oncogene Proteins c-ret - genetics</topic><topic>Proto-Oncogene Proteins c-ret - metabolism</topic><topic>Ret protein</topic><topic>Risk factors</topic><topic>Semaphorin-3A - genetics</topic><topic>Semaphorin-3A - metabolism</topic><topic>Semaphorins</topic><topic>Sequences</topic><topic>Single-nucleotide polymorphism</topic><topic>Smooth muscle</topic><topic>Spain</topic><topic>Studies</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Luzón-Toro, Berta</creatorcontrib><creatorcontrib>Fernández, Raquel M</creatorcontrib><creatorcontrib>Torroglosa, Ana</creatorcontrib><creatorcontrib>de Agustín, Juan Carlos</creatorcontrib><creatorcontrib>Méndez-Vidal, Cristina</creatorcontrib><creatorcontrib>Segura, Dolores Isabel</creatorcontrib><creatorcontrib>Antiñolo, Guillermo</creatorcontrib><creatorcontrib>Borrego, Salud</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Opposing Viewpoints Resource Center</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Nursing & Allied Health Database</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological & Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Luzón-Toro, Berta</au><au>Fernández, Raquel M</au><au>Torroglosa, Ana</au><au>de Agustín, Juan Carlos</au><au>Méndez-Vidal, Cristina</au><au>Segura, Dolores Isabel</au><au>Antiñolo, Guillermo</au><au>Borrego, Salud</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Mutational spectrum of semaphorin 3A and semaphorin 3D genes in Spanish Hirschsprung patients</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2013-01-23</date><risdate>2013</risdate><volume>8</volume><issue>1</issue><spage>e54800</spage><epage>e54800</epage><pages>e54800-e54800</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Hirschsprung disease (HSCR, OMIM 142623) is a developmental disorder characterized by the absence of ganglion cells along variable lengths of the distal gastrointestinal tract, which results in tonic contraction of the aganglionic colon segment and functional intestinal obstruction. The RET proto-oncogene is the major gene associated to HSCR with differential contributions of its rare and common, coding and noncoding mutations to the multifactorial nature of this pathology. In addition, many other genes have been described to be associated with this pathology, including the semaphorins class III genes SEMA3A (7p12.1) and SEMA3D (7q21.11) through SNP array analyses and by next-generation sequencing technologies. Semaphorins are guidance cues for developing neurons implicated in the axonal projections and in the determination of the migratory pathway for neural-crest derived neural precursors during enteric nervous system development. In addition, it has been described that increased SEMA3A expression may be a risk factor for HSCR through the upregulation of the gene in the aganglionic smooth muscle layer of the colon in HSCR patients. Here we present the results of a comprehensive analysis of SEMA3A and SEMA3D in a series of 200 Spanish HSCR patients by the mutational screening of its coding sequence, which has led to find a number of potentially deleterious variants. RET mutations have been also detected in some of those patients carrying SEMAs variants. We have evaluated the A131T-SEMA3A, S598G-SEMA3A and E198K-SEMA3D mutations using colon tissue sections of these patients by immunohistochemistry. All mutants presented increased protein expression in smooth muscle layer of ganglionic segments. Moreover, A131T-SEMA3A also maintained higher protein levels in the aganglionic muscle layers. These findings strongly suggest that these mutants have a pathogenic effect on the disease. Furthermore, because of their coexistence with RET mutations, our data substantiate the additive genetic model proposed for this rare disorder and further support the association of SEMAs genes with HSCR.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23372769</pmid><doi>10.1371/journal.pone.0054800</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2013-01, Vol.8 (1), p.e54800-e54800 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1327868812 |
source | Publicly Available Content Database; PubMed Central |
subjects | Analysis Axon guidance Biology Birth defects Chromosome 7 Coding Colon Colon - metabolism Colon - pathology Contraction Cues Developmental disabilities Disease Enteric nervous system European Continental Ancestry Group - genetics Female Ganglion cells Gastrointestinal diseases Gastrointestinal system Gastrointestinal tract Genes Genetic aspects Genetics Genomes Haplotypes Hirschsprung Disease - genetics Hirschsprung Disease - metabolism Hirschsprung's disease Hospitals Humans Immunohistochemistry Intestine Kinases Male Medicine Muscles Mutants Mutation Nervous system Neural stem cells Non-coding RNA Pathogenesis Pathology Patients Proto-Oncogene Proteins c-ret - genetics Proto-Oncogene Proteins c-ret - metabolism Ret protein Risk factors Semaphorin-3A - genetics Semaphorin-3A - metabolism Semaphorins Sequences Single-nucleotide polymorphism Smooth muscle Spain Studies |
title | Mutational spectrum of semaphorin 3A and semaphorin 3D genes in Spanish Hirschsprung patients |
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