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A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use
Yponomeutoidea, one of the early-diverging lineages of ditrysian Lepidoptera, comprise about 1,800 species worldwide, including notable pests and insect-plant interaction models. Yponomeutoids were one of the earliest lepidopteran clades to evolve external feeding and to extensively colonize herbace...
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Published in: | PloS one 2013-01, Vol.8 (1), p.e55066-e55066 |
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description | Yponomeutoidea, one of the early-diverging lineages of ditrysian Lepidoptera, comprise about 1,800 species worldwide, including notable pests and insect-plant interaction models. Yponomeutoids were one of the earliest lepidopteran clades to evolve external feeding and to extensively colonize herbaceous angiosperms. Despite the group's economic importance, and its value for tracing early lepidopteran evolution, the biodiversity and phylogeny of Yponomeutoidea have been relatively little studied.
Eight nuclear genes (8 kb) were initially sequenced for 86 putative yponomeutoid species, spanning all previously recognized suprageneric groups, and 53 outgroups representing 22 families and 12 superfamilies. Eleven to 19 additional genes, yielding a total of 14.8 to 18.9 kb, were then sampled for a subset of taxa, including 28 yponomeutoids and 43 outgroups. Maximum likelihood analyses were conducted on data sets differing in numbers of genes, matrix completeness, inclusion/weighting of synonymous substitutions, and inclusion/exclusion of "rogue" taxa. Monophyly for Yponomeutoidea was supported very strongly when the 18 "rogue" taxa were excluded, and moderately otherwise. Results from different analyses are highly congruent and relationships within Yponomeutoidea are well supported overall. There is strong support overall for monophyly of families previously recognized on morphological grounds, including Yponomeutidae, Ypsolophidae, Plutellidae, Glyphipterigidae, Argyresthiidae, Attevidae, Praydidae, Heliodinidae, and Bedelliidae. We also assign family rank to Scythropiinae (Scythropiidae stat. rev.), which in our trees are strongly grouped with Bedelliidae, in contrast to all previous proposals. We present a working hypothesis of among-family relationships, and an informal higher classification. Host plant family associations of yponomeutoid subfamilies and families are non-random, but show no trends suggesting parallel phylogenesis. Our analyses suggest that previous characterizations of yponomeutoids as predominantly Holarctic were based on insufficient sampling.
We provide the first robust molecular phylogeny for Yponomeutoidea, together with a revised classification and new insights into their life history evolution and biogeography. |
doi_str_mv | 10.1371/journal.pone.0055066 |
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Eight nuclear genes (8 kb) were initially sequenced for 86 putative yponomeutoid species, spanning all previously recognized suprageneric groups, and 53 outgroups representing 22 families and 12 superfamilies. Eleven to 19 additional genes, yielding a total of 14.8 to 18.9 kb, were then sampled for a subset of taxa, including 28 yponomeutoids and 43 outgroups. Maximum likelihood analyses were conducted on data sets differing in numbers of genes, matrix completeness, inclusion/weighting of synonymous substitutions, and inclusion/exclusion of "rogue" taxa. Monophyly for Yponomeutoidea was supported very strongly when the 18 "rogue" taxa were excluded, and moderately otherwise. Results from different analyses are highly congruent and relationships within Yponomeutoidea are well supported overall. There is strong support overall for monophyly of families previously recognized on morphological grounds, including Yponomeutidae, Ypsolophidae, Plutellidae, Glyphipterigidae, Argyresthiidae, Attevidae, Praydidae, Heliodinidae, and Bedelliidae. We also assign family rank to Scythropiinae (Scythropiidae stat. rev.), which in our trees are strongly grouped with Bedelliidae, in contrast to all previous proposals. We present a working hypothesis of among-family relationships, and an informal higher classification. Host plant family associations of yponomeutoid subfamilies and families are non-random, but show no trends suggesting parallel phylogenesis. Our analyses suggest that previous characterizations of yponomeutoids as predominantly Holarctic were based on insufficient sampling.
We provide the first robust molecular phylogeny for Yponomeutoidea, together with a revised classification and new insights into their life history evolution and biogeography.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0055066</identifier><identifier>PMID: 23383061</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Analysis ; Angiosperms ; Animals ; Autobiographies ; Biodiversity ; Biogeography ; Biology ; Butterflies & moths ; Classification ; Economic importance ; Evolution ; Evolution, Molecular ; Evolutionary biology ; Family relations ; Genes ; Genes, Insect - genetics ; Genetic research ; Glyphipterigidae ; Heliodinidae ; Host plants ; Hypotheses ; Insects ; Lepidoptera ; Lepidoptera - classification ; Lepidoptera - genetics ; Lepidoptera - physiology ; Life history ; Lyonetiidae ; Museums ; Pests ; Phylogenetics ; Phylogeny ; Phylogeography ; Plant evolution ; Plants ; Plutellidae ; Studies ; Taxa ; Yponomeutidae ; Yponomeutoidea ; Zygaenoidea</subject><ispartof>PloS one, 2013-01, Vol.8 (1), p.e55066-e55066</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Sohn et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Sohn et al 2013 Sohn et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c593t-e04a445d6515a387545a08cc36859f3ff83480c929bfb349123e897ff2488e233</citedby><cites>FETCH-LOGICAL-c593t-e04a445d6515a387545a08cc36859f3ff83480c929bfb349123e897ff2488e233</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1327979985/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1327979985?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23383061$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Chave, Jerome</contributor><creatorcontrib>Sohn, Jae-Cheon</creatorcontrib><creatorcontrib>Regier, Jerome C</creatorcontrib><creatorcontrib>Mitter, Charles</creatorcontrib><creatorcontrib>Davis, Donald</creatorcontrib><creatorcontrib>Landry, Jean-François</creatorcontrib><creatorcontrib>Zwick, Andreas</creatorcontrib><creatorcontrib>Cummings, Michael P</creatorcontrib><title>A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Yponomeutoidea, one of the early-diverging lineages of ditrysian Lepidoptera, comprise about 1,800 species worldwide, including notable pests and insect-plant interaction models. Yponomeutoids were one of the earliest lepidopteran clades to evolve external feeding and to extensively colonize herbaceous angiosperms. Despite the group's economic importance, and its value for tracing early lepidopteran evolution, the biodiversity and phylogeny of Yponomeutoidea have been relatively little studied.
Eight nuclear genes (8 kb) were initially sequenced for 86 putative yponomeutoid species, spanning all previously recognized suprageneric groups, and 53 outgroups representing 22 families and 12 superfamilies. Eleven to 19 additional genes, yielding a total of 14.8 to 18.9 kb, were then sampled for a subset of taxa, including 28 yponomeutoids and 43 outgroups. Maximum likelihood analyses were conducted on data sets differing in numbers of genes, matrix completeness, inclusion/weighting of synonymous substitutions, and inclusion/exclusion of "rogue" taxa. Monophyly for Yponomeutoidea was supported very strongly when the 18 "rogue" taxa were excluded, and moderately otherwise. Results from different analyses are highly congruent and relationships within Yponomeutoidea are well supported overall. There is strong support overall for monophyly of families previously recognized on morphological grounds, including Yponomeutidae, Ypsolophidae, Plutellidae, Glyphipterigidae, Argyresthiidae, Attevidae, Praydidae, Heliodinidae, and Bedelliidae. We also assign family rank to Scythropiinae (Scythropiidae stat. rev.), which in our trees are strongly grouped with Bedelliidae, in contrast to all previous proposals. We present a working hypothesis of among-family relationships, and an informal higher classification. Host plant family associations of yponomeutoid subfamilies and families are non-random, but show no trends suggesting parallel phylogenesis. Our analyses suggest that previous characterizations of yponomeutoids as predominantly Holarctic were based on insufficient sampling.
We provide the first robust molecular phylogeny for Yponomeutoidea, together with a revised classification and new insights into their life history evolution and biogeography.</description><subject>Analysis</subject><subject>Angiosperms</subject><subject>Animals</subject><subject>Autobiographies</subject><subject>Biodiversity</subject><subject>Biogeography</subject><subject>Biology</subject><subject>Butterflies & moths</subject><subject>Classification</subject><subject>Economic importance</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>Evolutionary biology</subject><subject>Family relations</subject><subject>Genes</subject><subject>Genes, Insect - genetics</subject><subject>Genetic research</subject><subject>Glyphipterigidae</subject><subject>Heliodinidae</subject><subject>Host plants</subject><subject>Hypotheses</subject><subject>Insects</subject><subject>Lepidoptera</subject><subject>Lepidoptera - classification</subject><subject>Lepidoptera - genetics</subject><subject>Lepidoptera - physiology</subject><subject>Life history</subject><subject>Lyonetiidae</subject><subject>Museums</subject><subject>Pests</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Phylogeography</subject><subject>Plant evolution</subject><subject>Plants</subject><subject>Plutellidae</subject><subject>Studies</subject><subject>Taxa</subject><subject>Yponomeutidae</subject><subject>Yponomeutoidea</subject><subject>Zygaenoidea</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptUstqGzEUHUpLk6b9g9IKukkhdjWjx0ibgAl9BAzdtGuh0cNW0Iymkibg7-mPVrYnIS5BC0n3nnPug1NV72u4rFFbf7kLUxykX45hMEsICYGUvqjOa46aBW0gevnkfVa9SemugBCj9HV11iDEEKT1efV3BfrgjZq8jGDc7nzYmGEHbIhgV5RDb6YcnDYSXLohGZXlFVib0ekwZhPLR7scd8nJz0AOGricgOtH75TMLgzpIKS8TMnZOXYFOleKhE2Upd6BlbcGmPvgp30eBAu2IWUwejlkMCXztnplpU_m3XxfVL-_ff1182Ox_vn99ma1XijCUV4YiCXGRFNSE4lYSzCRkCmFKCPcImsZwgwq3vDOdgjzukGG8dbaBjNmykouqo9H3dGHJOb9JlGjpuUt54wUxO0RoYO8E2N0vYw7EaQTh0CIGyFjdsobQbWUEmpEO9hhJRtenlAT2lCrsVG8aF3P1aauN1qZIUfpT0RPM4Pbik24F4jQGhNYBC5ngRj-TCZl0bukjC9rM2EqfTcM04YcoZ_-gz4_3YzayDKAG2woddVeVKxw2_KGMswKavkMqhxteqeKGa0r8RMCPhJUDClFYx9nrKHYW_mhGbG3spitXGgfnu7nkfTgXfQPbEzz3Q</recordid><startdate>20130131</startdate><enddate>20130131</enddate><creator>Sohn, Jae-Cheon</creator><creator>Regier, Jerome C</creator><creator>Mitter, Charles</creator><creator>Davis, Donald</creator><creator>Landry, Jean-François</creator><creator>Zwick, Andreas</creator><creator>Cummings, Michael P</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130131</creationdate><title>A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use</title><author>Sohn, Jae-Cheon ; Regier, Jerome C ; Mitter, Charles ; Davis, Donald ; Landry, Jean-François ; Zwick, Andreas ; Cummings, Michael P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c593t-e04a445d6515a387545a08cc36859f3ff83480c929bfb349123e897ff2488e233</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Analysis</topic><topic>Angiosperms</topic><topic>Animals</topic><topic>Autobiographies</topic><topic>Biodiversity</topic><topic>Biogeography</topic><topic>Biology</topic><topic>Butterflies & moths</topic><topic>Classification</topic><topic>Economic importance</topic><topic>Evolution</topic><topic>Evolution, Molecular</topic><topic>Evolutionary biology</topic><topic>Family relations</topic><topic>Genes</topic><topic>Genes, Insect - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sohn, Jae-Cheon</au><au>Regier, Jerome C</au><au>Mitter, Charles</au><au>Davis, Donald</au><au>Landry, Jean-François</au><au>Zwick, Andreas</au><au>Cummings, Michael P</au><au>Chave, Jerome</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2013-01-31</date><risdate>2013</risdate><volume>8</volume><issue>1</issue><spage>e55066</spage><epage>e55066</epage><pages>e55066-e55066</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Yponomeutoidea, one of the early-diverging lineages of ditrysian Lepidoptera, comprise about 1,800 species worldwide, including notable pests and insect-plant interaction models. Yponomeutoids were one of the earliest lepidopteran clades to evolve external feeding and to extensively colonize herbaceous angiosperms. Despite the group's economic importance, and its value for tracing early lepidopteran evolution, the biodiversity and phylogeny of Yponomeutoidea have been relatively little studied.
Eight nuclear genes (8 kb) were initially sequenced for 86 putative yponomeutoid species, spanning all previously recognized suprageneric groups, and 53 outgroups representing 22 families and 12 superfamilies. Eleven to 19 additional genes, yielding a total of 14.8 to 18.9 kb, were then sampled for a subset of taxa, including 28 yponomeutoids and 43 outgroups. Maximum likelihood analyses were conducted on data sets differing in numbers of genes, matrix completeness, inclusion/weighting of synonymous substitutions, and inclusion/exclusion of "rogue" taxa. Monophyly for Yponomeutoidea was supported very strongly when the 18 "rogue" taxa were excluded, and moderately otherwise. Results from different analyses are highly congruent and relationships within Yponomeutoidea are well supported overall. There is strong support overall for monophyly of families previously recognized on morphological grounds, including Yponomeutidae, Ypsolophidae, Plutellidae, Glyphipterigidae, Argyresthiidae, Attevidae, Praydidae, Heliodinidae, and Bedelliidae. We also assign family rank to Scythropiinae (Scythropiidae stat. rev.), which in our trees are strongly grouped with Bedelliidae, in contrast to all previous proposals. We present a working hypothesis of among-family relationships, and an informal higher classification. Host plant family associations of yponomeutoid subfamilies and families are non-random, but show no trends suggesting parallel phylogenesis. Our analyses suggest that previous characterizations of yponomeutoids as predominantly Holarctic were based on insufficient sampling.
We provide the first robust molecular phylogeny for Yponomeutoidea, together with a revised classification and new insights into their life history evolution and biogeography.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23383061</pmid><doi>10.1371/journal.pone.0055066</doi><oa>free_for_read</oa></addata></record> |
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source | Publicly Available Content (ProQuest); PubMed |
subjects | Analysis Angiosperms Animals Autobiographies Biodiversity Biogeography Biology Butterflies & moths Classification Economic importance Evolution Evolution, Molecular Evolutionary biology Family relations Genes Genes, Insect - genetics Genetic research Glyphipterigidae Heliodinidae Host plants Hypotheses Insects Lepidoptera Lepidoptera - classification Lepidoptera - genetics Lepidoptera - physiology Life history Lyonetiidae Museums Pests Phylogenetics Phylogeny Phylogeography Plant evolution Plants Plutellidae Studies Taxa Yponomeutidae Yponomeutoidea Zygaenoidea |
title | A molecular phylogeny for yponomeutoidea (insecta, Lepidoptera, ditrysia) and its implications for classification, biogeography and the evolution of host plant use |
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