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Genetic polymorphisms of miR-146a and miR-27a, H. pylori infection, and risk of gastric lesions in a Chinese population
MicroRNAs (miRNAs) have been implicated in various human diseases. Single nucleotide polymorphisms (SNPs) in inflammation-related miRNA may play an important role in Helicobacter pylori (H. pylori)-induced gastric lesions. To evaluate the associations between miRNA SNPs, H. pylori and gastric lesion...
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Published in: | PloS one 2013-04, Vol.8 (4), p.e61250 |
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description | MicroRNAs (miRNAs) have been implicated in various human diseases. Single nucleotide polymorphisms (SNPs) in inflammation-related miRNA may play an important role in Helicobacter pylori (H. pylori)-induced gastric lesions. To evaluate the associations between miRNA SNPs, H. pylori and gastric lesions, a population-based study was conducted in Linqu County, China.
Based on serum miRNA array conducted in this population, two SNP loci (miR-146a rs2910164: G>C and miR-27a rs895819: T>C) were determined by polymerase chain reaction-restriction fragment length polymorphism in 2,380 participants with diverse gastric lesions. Using participants with superficial gastritis and mild chronic atrophic gastritis as the reference group, we found that rs2910164 CC carriers had a significantly increased risk of intestinal metaplasia [adjusted odds ratio (OR), 1.42; 95% confidence interval (CI), 1.03-1.97] and dysplasia (OR, 1.54; 95% CI, 1.05-2.25) compared to GG carriers, whereas no significant association was observed for rs895819. Stratified analysis by H. pylori infection indicated that rs2910164 C allele was associated with an increased risk of intestinal metaplasia and dysplasia only among individuals infected with H. pylori (CC vs. GG: OR, 1.53; 95% CI, 1.12-2.08, P for trend = 0.004). Participants who simultaneously carried variant alleles and H. pylori infection were more likely to develop intestinal metaplasia and dysplasia, although the interaction between genetic variants and H. pylori infection was not significant (P for interaction = 0.35 for rs2910164 and 0.92 for rs895819).
These findings suggest that miR-146a rs2910164 polymorphism may contribute to the evolution of H. pylori-associated gastric lesions in this high-risk population. |
doi_str_mv | 10.1371/journal.pone.0061250 |
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Based on serum miRNA array conducted in this population, two SNP loci (miR-146a rs2910164: G>C and miR-27a rs895819: T>C) were determined by polymerase chain reaction-restriction fragment length polymorphism in 2,380 participants with diverse gastric lesions. Using participants with superficial gastritis and mild chronic atrophic gastritis as the reference group, we found that rs2910164 CC carriers had a significantly increased risk of intestinal metaplasia [adjusted odds ratio (OR), 1.42; 95% confidence interval (CI), 1.03-1.97] and dysplasia (OR, 1.54; 95% CI, 1.05-2.25) compared to GG carriers, whereas no significant association was observed for rs895819. Stratified analysis by H. pylori infection indicated that rs2910164 C allele was associated with an increased risk of intestinal metaplasia and dysplasia only among individuals infected with H. pylori (CC vs. GG: OR, 1.53; 95% CI, 1.12-2.08, P for trend = 0.004). Participants who simultaneously carried variant alleles and H. pylori infection were more likely to develop intestinal metaplasia and dysplasia, although the interaction between genetic variants and H. pylori infection was not significant (P for interaction = 0.35 for rs2910164 and 0.92 for rs895819).
These findings suggest that miR-146a rs2910164 polymorphism may contribute to the evolution of H. pylori-associated gastric lesions in this high-risk population.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0061250</identifier><identifier>PMID: 23613822</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adult ; Alleles ; Asian Continental Ancestry Group - genetics ; Biology ; Biopsy ; Carriers ; China ; Chromosomes ; Confidence intervals ; Diseases ; Dysplasia ; Education ; Epidemiology ; Female ; Gastric cancer ; Gastritis ; Genetic aspects ; Genetic diversity ; Genetic Predisposition to Disease ; Genetic variance ; Genomes ; Health aspects ; Health risks ; Helicobacter infections ; Helicobacter Infections - genetics ; Helicobacter pylori ; Helicobacter pylori - physiology ; Humans ; Infections ; Intestine ; Laboratories ; Lesions ; Male ; Medical research ; Medicine ; Metaplasia ; MicroRNA ; MicroRNAs ; MicroRNAs - genetics ; Middle Aged ; miRNA ; Molecular biology ; Oxidative stress ; Polymerase chain reaction ; Polymorphism ; Polymorphism, Single Nucleotide - genetics ; Population ; Population studies ; Prostate ; Restriction fragment length polymorphism ; Risk ; Risk Factors ; Single nucleotide polymorphisms ; Single-nucleotide polymorphism ; Stomach - pathology ; Stomach cancer ; Stomach Neoplasms - genetics ; Stomach Neoplasms - microbiology ; Studies ; Tumor necrosis factor-TNF</subject><ispartof>PloS one, 2013-04, Vol.8 (4), p.e61250</ispartof><rights>COPYRIGHT 2013 Public Library of Science</rights><rights>2013 Song et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Song et al 2013 Song et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-4eecbcf3a901aeaacd9d5ed160fbc154f81e2ec54cd70e64f5998c83d84e42193</citedby><cites>FETCH-LOGICAL-c692t-4eecbcf3a901aeaacd9d5ed160fbc154f81e2ec54cd70e64f5998c83d84e42193</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1343547722/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1343547722?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23613822$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Suzuki, Hiromu</contributor><creatorcontrib>Song, Ming-yang</creatorcontrib><creatorcontrib>Su, Hui-juan</creatorcontrib><creatorcontrib>Zhang, Lian</creatorcontrib><creatorcontrib>Ma, Jun-ling</creatorcontrib><creatorcontrib>Li, Ji-you</creatorcontrib><creatorcontrib>Pan, Kai-feng</creatorcontrib><creatorcontrib>You, Wei-cheng</creatorcontrib><title>Genetic polymorphisms of miR-146a and miR-27a, H. pylori infection, and risk of gastric lesions in a Chinese population</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>MicroRNAs (miRNAs) have been implicated in various human diseases. Single nucleotide polymorphisms (SNPs) in inflammation-related miRNA may play an important role in Helicobacter pylori (H. pylori)-induced gastric lesions. To evaluate the associations between miRNA SNPs, H. pylori and gastric lesions, a population-based study was conducted in Linqu County, China.
Based on serum miRNA array conducted in this population, two SNP loci (miR-146a rs2910164: G>C and miR-27a rs895819: T>C) were determined by polymerase chain reaction-restriction fragment length polymorphism in 2,380 participants with diverse gastric lesions. Using participants with superficial gastritis and mild chronic atrophic gastritis as the reference group, we found that rs2910164 CC carriers had a significantly increased risk of intestinal metaplasia [adjusted odds ratio (OR), 1.42; 95% confidence interval (CI), 1.03-1.97] and dysplasia (OR, 1.54; 95% CI, 1.05-2.25) compared to GG carriers, whereas no significant association was observed for rs895819. Stratified analysis by H. pylori infection indicated that rs2910164 C allele was associated with an increased risk of intestinal metaplasia and dysplasia only among individuals infected with H. pylori (CC vs. GG: OR, 1.53; 95% CI, 1.12-2.08, P for trend = 0.004). Participants who simultaneously carried variant alleles and H. pylori infection were more likely to develop intestinal metaplasia and dysplasia, although the interaction between genetic variants and H. pylori infection was not significant (P for interaction = 0.35 for rs2910164 and 0.92 for rs895819).
These findings suggest that miR-146a rs2910164 polymorphism may contribute to the evolution of H. pylori-associated gastric lesions in this high-risk population.</description><subject>Adult</subject><subject>Alleles</subject><subject>Asian Continental Ancestry Group - genetics</subject><subject>Biology</subject><subject>Biopsy</subject><subject>Carriers</subject><subject>China</subject><subject>Chromosomes</subject><subject>Confidence intervals</subject><subject>Diseases</subject><subject>Dysplasia</subject><subject>Education</subject><subject>Epidemiology</subject><subject>Female</subject><subject>Gastric cancer</subject><subject>Gastritis</subject><subject>Genetic aspects</subject><subject>Genetic diversity</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic variance</subject><subject>Genomes</subject><subject>Health aspects</subject><subject>Health risks</subject><subject>Helicobacter infections</subject><subject>Helicobacter Infections - genetics</subject><subject>Helicobacter pylori</subject><subject>Helicobacter pylori - physiology</subject><subject>Humans</subject><subject>Infections</subject><subject>Intestine</subject><subject>Laboratories</subject><subject>Lesions</subject><subject>Male</subject><subject>Medical research</subject><subject>Medicine</subject><subject>Metaplasia</subject><subject>MicroRNA</subject><subject>MicroRNAs</subject><subject>MicroRNAs - genetics</subject><subject>Middle Aged</subject><subject>miRNA</subject><subject>Molecular biology</subject><subject>Oxidative stress</subject><subject>Polymerase chain reaction</subject><subject>Polymorphism</subject><subject>Polymorphism, Single Nucleotide - genetics</subject><subject>Population</subject><subject>Population studies</subject><subject>Prostate</subject><subject>Restriction fragment length polymorphism</subject><subject>Risk</subject><subject>Risk Factors</subject><subject>Single nucleotide polymorphisms</subject><subject>Single-nucleotide polymorphism</subject><subject>Stomach - pathology</subject><subject>Stomach cancer</subject><subject>Stomach Neoplasms - genetics</subject><subject>Stomach Neoplasms - microbiology</subject><subject>Studies</subject><subject>Tumor necrosis factor-TNF</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNkl2L1DAYhYso7rr6D0QLgiDsjPlOeyMsg-4OLCysH7chk76dyZo2NWnV-fdmZrrLFBSkF22T55wkJyfLXmI0x1Ti93d-CK128863MEdIYMLRo-wUl5TMBEH08dH3SfYsxjuEOC2EeJqdECowLQg5zX5dQgu9NXnn3bbxodvY2MTc13ljb2eYCZ3rttr_EKnP86t53m2dDza3bQ2mt7493xPBxu872VrHPiQ_BzHNxYTlOl9sbAsR0iLd4PRO9Dx7UmsX4cX4Psu-fvr4ZXE1u765XC4urmdGlKSfMQCzMjXVJcIatDZVWXGosED1ymDO6gIDAcOZqSQCwWpeloUpaFUwYCSd_yx7ffDtnI9qzCwqTBnlTEpCErE8EJXXd6oLttFhq7y2aj_gw1rpkBJyoAqgteGcr3gSI1MWtRRmxaVEkpvSyOT1YVxtWDVQGWj7oN3EdDrT2o1a-5-KClJigpPBm9Eg-B8DxP4fWx6ptU67Shfhk5lpbDTqgsmCMIpKnqj5X6j0VNBYk1pT2zQ-EbybCBLTw-9-rYcY1fLz7f-zN9-m7NsjdgPa9Zvo3bDrQZyC7ACa4GMMUD8kh5Half4-DbUrvRpLn2SvjlN_EN23nP4B1dz8Lw</recordid><startdate>20130417</startdate><enddate>20130417</enddate><creator>Song, Ming-yang</creator><creator>Su, Hui-juan</creator><creator>Zhang, Lian</creator><creator>Ma, Jun-ling</creator><creator>Li, Ji-you</creator><creator>Pan, Kai-feng</creator><creator>You, Wei-cheng</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130417</creationdate><title>Genetic polymorphisms of miR-146a and miR-27a, H. pylori infection, and risk of gastric lesions in a Chinese population</title><author>Song, Ming-yang ; Su, Hui-juan ; Zhang, Lian ; Ma, Jun-ling ; Li, Ji-you ; Pan, Kai-feng ; You, Wei-cheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-4eecbcf3a901aeaacd9d5ed160fbc154f81e2ec54cd70e64f5998c83d84e42193</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Adult</topic><topic>Alleles</topic><topic>Asian Continental Ancestry Group - genetics</topic><topic>Biology</topic><topic>Biopsy</topic><topic>Carriers</topic><topic>China</topic><topic>Chromosomes</topic><topic>Confidence intervals</topic><topic>Diseases</topic><topic>Dysplasia</topic><topic>Education</topic><topic>Epidemiology</topic><topic>Female</topic><topic>Gastric cancer</topic><topic>Gastritis</topic><topic>Genetic aspects</topic><topic>Genetic diversity</topic><topic>Genetic Predisposition to Disease</topic><topic>Genetic variance</topic><topic>Genomes</topic><topic>Health aspects</topic><topic>Health risks</topic><topic>Helicobacter infections</topic><topic>Helicobacter Infections - genetics</topic><topic>Helicobacter pylori</topic><topic>Helicobacter pylori - physiology</topic><topic>Humans</topic><topic>Infections</topic><topic>Intestine</topic><topic>Laboratories</topic><topic>Lesions</topic><topic>Male</topic><topic>Medical research</topic><topic>Medicine</topic><topic>Metaplasia</topic><topic>MicroRNA</topic><topic>MicroRNAs</topic><topic>MicroRNAs - 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Single nucleotide polymorphisms (SNPs) in inflammation-related miRNA may play an important role in Helicobacter pylori (H. pylori)-induced gastric lesions. To evaluate the associations between miRNA SNPs, H. pylori and gastric lesions, a population-based study was conducted in Linqu County, China.
Based on serum miRNA array conducted in this population, two SNP loci (miR-146a rs2910164: G>C and miR-27a rs895819: T>C) were determined by polymerase chain reaction-restriction fragment length polymorphism in 2,380 participants with diverse gastric lesions. Using participants with superficial gastritis and mild chronic atrophic gastritis as the reference group, we found that rs2910164 CC carriers had a significantly increased risk of intestinal metaplasia [adjusted odds ratio (OR), 1.42; 95% confidence interval (CI), 1.03-1.97] and dysplasia (OR, 1.54; 95% CI, 1.05-2.25) compared to GG carriers, whereas no significant association was observed for rs895819. Stratified analysis by H. pylori infection indicated that rs2910164 C allele was associated with an increased risk of intestinal metaplasia and dysplasia only among individuals infected with H. pylori (CC vs. GG: OR, 1.53; 95% CI, 1.12-2.08, P for trend = 0.004). Participants who simultaneously carried variant alleles and H. pylori infection were more likely to develop intestinal metaplasia and dysplasia, although the interaction between genetic variants and H. pylori infection was not significant (P for interaction = 0.35 for rs2910164 and 0.92 for rs895819).
These findings suggest that miR-146a rs2910164 polymorphism may contribute to the evolution of H. pylori-associated gastric lesions in this high-risk population.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23613822</pmid><doi>10.1371/journal.pone.0061250</doi><tpages>e61250</tpages><oa>free_for_read</oa></addata></record> |
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source | PMC (PubMed Central); Publicly Available Content (ProQuest) |
subjects | Adult Alleles Asian Continental Ancestry Group - genetics Biology Biopsy Carriers China Chromosomes Confidence intervals Diseases Dysplasia Education Epidemiology Female Gastric cancer Gastritis Genetic aspects Genetic diversity Genetic Predisposition to Disease Genetic variance Genomes Health aspects Health risks Helicobacter infections Helicobacter Infections - genetics Helicobacter pylori Helicobacter pylori - physiology Humans Infections Intestine Laboratories Lesions Male Medical research Medicine Metaplasia MicroRNA MicroRNAs MicroRNAs - genetics Middle Aged miRNA Molecular biology Oxidative stress Polymerase chain reaction Polymorphism Polymorphism, Single Nucleotide - genetics Population Population studies Prostate Restriction fragment length polymorphism Risk Risk Factors Single nucleotide polymorphisms Single-nucleotide polymorphism Stomach - pathology Stomach cancer Stomach Neoplasms - genetics Stomach Neoplasms - microbiology Studies Tumor necrosis factor-TNF |
title | Genetic polymorphisms of miR-146a and miR-27a, H. pylori infection, and risk of gastric lesions in a Chinese population |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-21T13%3A58%3A51IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Genetic%20polymorphisms%20of%20miR-146a%20and%20miR-27a,%20H.%20pylori%20infection,%20and%20risk%20of%20gastric%20lesions%20in%20a%20Chinese%20population&rft.jtitle=PloS%20one&rft.au=Song,%20Ming-yang&rft.date=2013-04-17&rft.volume=8&rft.issue=4&rft.spage=e61250&rft.pages=e61250-&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0061250&rft_dat=%3Cgale_plos_%3EA478243095%3C/gale_plos_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c692t-4eecbcf3a901aeaacd9d5ed160fbc154f81e2ec54cd70e64f5998c83d84e42193%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1343547722&rft_id=info:pmid/23613822&rft_galeid=A478243095&rfr_iscdi=true |