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Quantification of Chitinase mRNA Levels in Human and Mouse Tissues by Real-Time PCR: Species-Specific Expression of Acidic Mammalian Chitinase in Stomach Tissues
Chitinase hydrolyzes chitin, which is an N-acetyl-D-glucosamine polymer that is present in a wide range of organisms, including insects, parasites and fungi. Although mammals do not contain any endogenous chitin, humans and mice express two active chitinases, chitotriosidase (Chit1) and acidic mamma...
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Published in: | PloS one 2013-06, Vol.8 (6), p.e67399-e67399 |
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description | Chitinase hydrolyzes chitin, which is an N-acetyl-D-glucosamine polymer that is present in a wide range of organisms, including insects, parasites and fungi. Although mammals do not contain any endogenous chitin, humans and mice express two active chitinases, chitotriosidase (Chit1) and acidic mammalian chitinase (AMCase). Because the level of expression of these chitinases is increased in many inflammatory conditions, including Gaucher disease and mouse models of asthma, both chitinases may play important roles in the pathophysiologies of these and other diseases. We recently established a quantitative PCR system using a single standard DNA and showed that AMCase mRNA is synthesized at extraordinarily high levels in mouse stomach tissues. In this study, we applied this methodology to the quantification of chitinase mRNAs in human tissues and found that both chitinase mRNAs were widely expressed in normal human tissues. Chit1 mRNA was highly expressed in the human lung, whereas AMCase mRNA was not overexpressed in normal human stomach tissues. The levels of these mRNAs in human tissues were significantly lower than the levels of housekeeping genes. Because the AMCase expression levels were quite different between the human and mouse stomach tissues, we developed a quantitative PCR system to compare the mRNA levels between human and mouse tissues using a human-mouse hybrid standard DNA. Our analysis showed that Chit1 mRNA is expressed at similar levels in normal human and mouse lung. In contrast, the AMCase expression level in human stomach was significantly lower than that expression level observed in mouse stomach. These mRNA differences between human and mouse stomach tissues were reflecting differences in the chitinolytic activities and levels of protein expression. Thus, the expression level of the AMCase in the stomach is species-specific. |
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Although mammals do not contain any endogenous chitin, humans and mice express two active chitinases, chitotriosidase (Chit1) and acidic mammalian chitinase (AMCase). Because the level of expression of these chitinases is increased in many inflammatory conditions, including Gaucher disease and mouse models of asthma, both chitinases may play important roles in the pathophysiologies of these and other diseases. We recently established a quantitative PCR system using a single standard DNA and showed that AMCase mRNA is synthesized at extraordinarily high levels in mouse stomach tissues. In this study, we applied this methodology to the quantification of chitinase mRNAs in human tissues and found that both chitinase mRNAs were widely expressed in normal human tissues. Chit1 mRNA was highly expressed in the human lung, whereas AMCase mRNA was not overexpressed in normal human stomach tissues. The levels of these mRNAs in human tissues were significantly lower than the levels of housekeeping genes. Because the AMCase expression levels were quite different between the human and mouse stomach tissues, we developed a quantitative PCR system to compare the mRNA levels between human and mouse tissues using a human-mouse hybrid standard DNA. Our analysis showed that Chit1 mRNA is expressed at similar levels in normal human and mouse lung. In contrast, the AMCase expression level in human stomach was significantly lower than that expression level observed in mouse stomach. These mRNA differences between human and mouse stomach tissues were reflecting differences in the chitinolytic activities and levels of protein expression. Thus, the expression level of the AMCase in the stomach is species-specific.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0067399</identifier><identifier>PMID: 23826286</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Animal models ; Animal tissues ; Animals ; Asthma ; Biology ; Chemistry ; Chitin ; Chitinase ; Chitinases - genetics ; Chitinases - metabolism ; Chronic obstructive pulmonary disease ; Deoxyribonucleic acid ; DNA ; Enzymes ; Fungi ; Gaucher's disease ; Gene expression ; Glucosamine ; Hexosaminidases - genetics ; Hexosaminidases - metabolism ; Human tissues ; Humans ; Inflammation ; Insects ; Lung - enzymology ; Lungs ; Male ; Mammals ; Medicine ; Mice ; Mice, Inbred C57BL ; mRNA ; N-Acetyl-D-glucosamine ; N-Acetylglucosamine ; Parasites ; Polymerase chain reaction ; Polymers ; Real-Time Polymerase Chain Reaction ; RNA, Messenger - genetics ; Rodents ; Species Specificity ; Stomach ; Stomach - enzymology ; Tissues</subject><ispartof>PloS one, 2013-06, Vol.8 (6), p.e67399-e67399</ispartof><rights>2013 Ohno et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2013 Ohno et al 2013 Ohno et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c592t-fce5bbe1d4a18c1a1b573a903850ae930ad8bb7025b5a59e84a7a6c29212ab623</citedby><cites>FETCH-LOGICAL-c592t-fce5bbe1d4a18c1a1b573a903850ae930ad8bb7025b5a59e84a7a6c29212ab623</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1372124164/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1372124164?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23826286$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Mizoguchi, Emiko</contributor><creatorcontrib>Ohno, Misa</creatorcontrib><creatorcontrib>Togashi, Yuto</creatorcontrib><creatorcontrib>Tsuda, Kyoko</creatorcontrib><creatorcontrib>Okawa, Kazuaki</creatorcontrib><creatorcontrib>Kamaya, Minori</creatorcontrib><creatorcontrib>Sakaguchi, Masayoshi</creatorcontrib><creatorcontrib>Sugahara, Yasusato</creatorcontrib><creatorcontrib>Oyama, Fumitaka</creatorcontrib><title>Quantification of Chitinase mRNA Levels in Human and Mouse Tissues by Real-Time PCR: Species-Specific Expression of Acidic Mammalian Chitinase in Stomach Tissues</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Chitinase hydrolyzes chitin, which is an N-acetyl-D-glucosamine polymer that is present in a wide range of organisms, including insects, parasites and fungi. 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The levels of these mRNAs in human tissues were significantly lower than the levels of housekeeping genes. Because the AMCase expression levels were quite different between the human and mouse stomach tissues, we developed a quantitative PCR system to compare the mRNA levels between human and mouse tissues using a human-mouse hybrid standard DNA. Our analysis showed that Chit1 mRNA is expressed at similar levels in normal human and mouse lung. In contrast, the AMCase expression level in human stomach was significantly lower than that expression level observed in mouse stomach. These mRNA differences between human and mouse stomach tissues were reflecting differences in the chitinolytic activities and levels of protein expression. Thus, the expression level of the AMCase in the stomach is species-specific.</description><subject>Animal models</subject><subject>Animal tissues</subject><subject>Animals</subject><subject>Asthma</subject><subject>Biology</subject><subject>Chemistry</subject><subject>Chitin</subject><subject>Chitinase</subject><subject>Chitinases - genetics</subject><subject>Chitinases - metabolism</subject><subject>Chronic obstructive pulmonary disease</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Enzymes</subject><subject>Fungi</subject><subject>Gaucher's disease</subject><subject>Gene expression</subject><subject>Glucosamine</subject><subject>Hexosaminidases - genetics</subject><subject>Hexosaminidases - metabolism</subject><subject>Human tissues</subject><subject>Humans</subject><subject>Inflammation</subject><subject>Insects</subject><subject>Lung - enzymology</subject><subject>Lungs</subject><subject>Male</subject><subject>Mammals</subject><subject>Medicine</subject><subject>Mice</subject><subject>Mice, Inbred C57BL</subject><subject>mRNA</subject><subject>N-Acetyl-D-glucosamine</subject><subject>N-Acetylglucosamine</subject><subject>Parasites</subject><subject>Polymerase chain reaction</subject><subject>Polymers</subject><subject>Real-Time Polymerase Chain Reaction</subject><subject>RNA, Messenger - genetics</subject><subject>Rodents</subject><subject>Species Specificity</subject><subject>Stomach</subject><subject>Stomach - enzymology</subject><subject>Tissues</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptUk1v1DAQjRCIlsI_QGCJC5csdpw4MYdKq1WhlbZ8bJezNXEmXa8SO8RJRX8O_xRvN1taxGmsmTfvzTxPFL1mdMZ4zj5s3dhbaGadszijVORcyifRMZM8iUVC-dMH76PohfdbSjNeCPE8Okp4kYikEMfR7-8j2MHURsNgnCWuJouNGYwFj6RdfZmTJd5g44mx5HxswRKwFbl0YyivjfcjelLekhVCE69Ni-TbYvWRXHWoDfr4LgZucvar69H7SWGuTRWSl9C20JjA-VcyyFwNrgW9OdC_jJ7V0Hh8NcWT6Mens_XiPF5-_XyxmC9jnclkiGuNWVkiq1JghWbAyiznICkvMgooOYWqKMucJlmZQSaxSCEHoROZsARKkfCT6O2et2ucV5O7XgWvAyJlIg2Iiz2icrBVXW9a6G-VA6PuEq6_VtAPRjeo6lwix7ySUmJKa1kgz0QYtMZa12m2Uzud1MayxUqjHXpoHpE-rlizUdfuRnEh00LmgeD9RNC7n8GmQbXGa2wasBh-R7FcsjwVRbGDvvsH-v_t0j1K9877Huv7YRjd4dihS-0uTk0XF9rePFzkvulwYvwPtlfWXQ</recordid><startdate>20130627</startdate><enddate>20130627</enddate><creator>Ohno, Misa</creator><creator>Togashi, Yuto</creator><creator>Tsuda, Kyoko</creator><creator>Okawa, Kazuaki</creator><creator>Kamaya, Minori</creator><creator>Sakaguchi, Masayoshi</creator><creator>Sugahara, Yasusato</creator><creator>Oyama, Fumitaka</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20130627</creationdate><title>Quantification of Chitinase mRNA Levels in Human and Mouse Tissues by Real-Time PCR: Species-Specific Expression of Acidic Mammalian Chitinase in Stomach Tissues</title><author>Ohno, Misa ; Togashi, Yuto ; Tsuda, Kyoko ; Okawa, Kazuaki ; Kamaya, Minori ; Sakaguchi, Masayoshi ; Sugahara, Yasusato ; Oyama, Fumitaka</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c592t-fce5bbe1d4a18c1a1b573a903850ae930ad8bb7025b5a59e84a7a6c29212ab623</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animal models</topic><topic>Animal tissues</topic><topic>Animals</topic><topic>Asthma</topic><topic>Biology</topic><topic>Chemistry</topic><topic>Chitin</topic><topic>Chitinase</topic><topic>Chitinases - 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Although mammals do not contain any endogenous chitin, humans and mice express two active chitinases, chitotriosidase (Chit1) and acidic mammalian chitinase (AMCase). Because the level of expression of these chitinases is increased in many inflammatory conditions, including Gaucher disease and mouse models of asthma, both chitinases may play important roles in the pathophysiologies of these and other diseases. We recently established a quantitative PCR system using a single standard DNA and showed that AMCase mRNA is synthesized at extraordinarily high levels in mouse stomach tissues. In this study, we applied this methodology to the quantification of chitinase mRNAs in human tissues and found that both chitinase mRNAs were widely expressed in normal human tissues. Chit1 mRNA was highly expressed in the human lung, whereas AMCase mRNA was not overexpressed in normal human stomach tissues. The levels of these mRNAs in human tissues were significantly lower than the levels of housekeeping genes. Because the AMCase expression levels were quite different between the human and mouse stomach tissues, we developed a quantitative PCR system to compare the mRNA levels between human and mouse tissues using a human-mouse hybrid standard DNA. Our analysis showed that Chit1 mRNA is expressed at similar levels in normal human and mouse lung. In contrast, the AMCase expression level in human stomach was significantly lower than that expression level observed in mouse stomach. These mRNA differences between human and mouse stomach tissues were reflecting differences in the chitinolytic activities and levels of protein expression. Thus, the expression level of the AMCase in the stomach is species-specific.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>23826286</pmid><doi>10.1371/journal.pone.0067399</doi><oa>free_for_read</oa></addata></record> |
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subjects | Animal models Animal tissues Animals Asthma Biology Chemistry Chitin Chitinase Chitinases - genetics Chitinases - metabolism Chronic obstructive pulmonary disease Deoxyribonucleic acid DNA Enzymes Fungi Gaucher's disease Gene expression Glucosamine Hexosaminidases - genetics Hexosaminidases - metabolism Human tissues Humans Inflammation Insects Lung - enzymology Lungs Male Mammals Medicine Mice Mice, Inbred C57BL mRNA N-Acetyl-D-glucosamine N-Acetylglucosamine Parasites Polymerase chain reaction Polymers Real-Time Polymerase Chain Reaction RNA, Messenger - genetics Rodents Species Specificity Stomach Stomach - enzymology Tissues |
title | Quantification of Chitinase mRNA Levels in Human and Mouse Tissues by Real-Time PCR: Species-Specific Expression of Acidic Mammalian Chitinase in Stomach Tissues |
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