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An association study between hypoxia inducible factor-1alpha (HIF-1α) polymorphisms and osteonecrosis

Bone hypoxia resulting from impaired blood flow is the final pathway for the development of osteonecrosis (ON). The aim of this study was to evaluate if HIF-1α, the major transcription factor triggered by hypoxia, is genetically implicated in susceptibility to ON. For this we analyzed frequencies of...

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Published in:PloS one 2013-11, Vol.8 (11), p.e79647-e79647
Main Authors: Chachami, Georgia, Kalousi, Alkmini, Papatheodorou, Loukia, Lyberopoulou, Aggeliki, Nasikas, Vasileios, Tanimoto, Keiji, Simos, George, Malizos, Konstantinos N, Georgatsou, Eleni
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creator Chachami, Georgia
Kalousi, Alkmini
Papatheodorou, Loukia
Lyberopoulou, Aggeliki
Nasikas, Vasileios
Tanimoto, Keiji
Simos, George
Malizos, Konstantinos N
Georgatsou, Eleni
description Bone hypoxia resulting from impaired blood flow is the final pathway for the development of osteonecrosis (ON). The aim of this study was to evaluate if HIF-1α, the major transcription factor triggered by hypoxia, is genetically implicated in susceptibility to ON. For this we analyzed frequencies of three known HIF-1α polymorphisms: one in exon 2 (C111A) and two in exon 12 (C1772T and G1790A) and their association with ON in a Greek population. Genotype analysis was performed using PCR-RFLP and rare alleles were further confirmed with sequencing. We found that genotype and allele frequency of C1772T and G1790A SNP of HIF-1α (SNPs found in our cohort) were not significantly different in ON patients compared to control patients. Furthermore these SNPs could not be associated with the different subgroups of ON. At the protein level we observed that the corresponding mutations (P582S and A588T, respectively) are not significant for protein function since the activity, expression and localization of the mutant proteins is practically indistinguishable from wt in HEK293 and Saos-2 cells. These results suggest that these missense mutations in the HIF-1α gene are not important for the risk of developing ON.
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The aim of this study was to evaluate if HIF-1α, the major transcription factor triggered by hypoxia, is genetically implicated in susceptibility to ON. For this we analyzed frequencies of three known HIF-1α polymorphisms: one in exon 2 (C111A) and two in exon 12 (C1772T and G1790A) and their association with ON in a Greek population. Genotype analysis was performed using PCR-RFLP and rare alleles were further confirmed with sequencing. We found that genotype and allele frequency of C1772T and G1790A SNP of HIF-1α (SNPs found in our cohort) were not significantly different in ON patients compared to control patients. Furthermore these SNPs could not be associated with the different subgroups of ON. At the protein level we observed that the corresponding mutations (P582S and A588T, respectively) are not significant for protein function since the activity, expression and localization of the mutant proteins is practically indistinguishable from wt in HEK293 and Saos-2 cells. These results suggest that these missense mutations in the HIF-1α gene are not important for the risk of developing ON.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24260273</pmid><doi>10.1371/journal.pone.0079647</doi><oa>free_for_read</oa></addata></record>
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subjects Adolescent
Adult
Aged
Alcohol
Alleles
Arthritis
Biochemistry
Biocompatibility
Biomedical research
Blood flow
Bone blood flow
Bone marrow
Cancer
Cell Line
Diabetes
Exons - genetics
Female
Gene frequency
Genes
Genetic aspects
Health sciences
Humans
Hypoxia
Hypoxia-Inducible Factor 1, alpha Subunit - genetics
Ischemia
Laboratories
Localization
Male
Medical research
Medicine
Middle Aged
Missense mutation
Mutation
NMR
Nuclear magnetic resonance
Osteonecrosis
Osteonecrosis - genetics
Pathogenesis
Patients
Polymerase chain reaction
Polymorphism, Restriction Fragment Length - genetics
Polymorphism, Single Nucleotide - genetics
Population
Population genetics
Prostate
Proteins
Restriction fragment length polymorphism
Single nucleotide polymorphisms
Single-nucleotide polymorphism
Subgroups
Vascular endothelial growth factor
Young Adult
title An association study between hypoxia inducible factor-1alpha (HIF-1α) polymorphisms and osteonecrosis
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