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Machine learning for outcome prediction of acute ischemic stroke post intra-arterial therapy
Stroke is a major cause of death and disability. Accurately predicting stroke outcome from a set of predictive variables may identify high-risk patients and guide treatment approaches, leading to decreased morbidity. Logistic regression models allow for the identification and validation of predictiv...
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Published in: | PloS one 2014-02, Vol.9 (2), p.e88225-e88225 |
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description | Stroke is a major cause of death and disability. Accurately predicting stroke outcome from a set of predictive variables may identify high-risk patients and guide treatment approaches, leading to decreased morbidity. Logistic regression models allow for the identification and validation of predictive variables. However, advanced machine learning algorithms offer an alternative, in particular, for large-scale multi-institutional data, with the advantage of easily incorporating newly available data to improve prediction performance. Our aim was to design and compare different machine learning methods, capable of predicting the outcome of endovascular intervention in acute anterior circulation ischaemic stroke.
We conducted a retrospective study of a prospectively collected database of acute ischaemic stroke treated by endovascular intervention. Using SPSS®, MATLAB®, and Rapidminer®, classical statistics as well as artificial neural network and support vector algorithms were applied to design a supervised machine capable of classifying these predictors into potential good and poor outcomes. These algorithms were trained, validated and tested using randomly divided data.
We included 107 consecutive acute anterior circulation ischaemic stroke patients treated by endovascular technique. Sixty-six were male and the mean age of 65.3. All the available demographic, procedural and clinical factors were included into the models. The final confusion matrix of the neural network, demonstrated an overall congruency of ∼ 80% between the target and output classes, with favourable receiving operative characteristics. However, after optimisation, the support vector machine had a relatively better performance, with a root mean squared error of 2.064 (SD: ± 0.408).
We showed promising accuracy of outcome prediction, using supervised machine learning algorithms, with potential for incorporation of larger multicenter datasets, likely further improving prediction. Finally, we propose that a robust machine learning system can potentially optimise the selection process for endovascular versus medical treatment in the management of acute stroke. |
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We conducted a retrospective study of a prospectively collected database of acute ischaemic stroke treated by endovascular intervention. Using SPSS®, MATLAB®, and Rapidminer®, classical statistics as well as artificial neural network and support vector algorithms were applied to design a supervised machine capable of classifying these predictors into potential good and poor outcomes. These algorithms were trained, validated and tested using randomly divided data.
We included 107 consecutive acute anterior circulation ischaemic stroke patients treated by endovascular technique. Sixty-six were male and the mean age of 65.3. All the available demographic, procedural and clinical factors were included into the models. The final confusion matrix of the neural network, demonstrated an overall congruency of ∼ 80% between the target and output classes, with favourable receiving operative characteristics. However, after optimisation, the support vector machine had a relatively better performance, with a root mean squared error of 2.064 (SD: ± 0.408).
We showed promising accuracy of outcome prediction, using supervised machine learning algorithms, with potential for incorporation of larger multicenter datasets, likely further improving prediction. Finally, we propose that a robust machine learning system can potentially optimise the selection process for endovascular versus medical treatment in the management of acute stroke.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0088225</identifier><identifier>PMID: 24520356</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adult ; Aged ; Algorithms ; Artificial Intelligence ; Artificial neural networks ; Blood ; Brain Ischemia - etiology ; Brain Ischemia - therapy ; Cardiovascular system ; Care and treatment ; Computer Science ; Data mining ; Demographics ; Endovascular Procedures - adverse effects ; FDA approval ; Female ; Humans ; International cooperation ; Intervention ; Intracranial Hemorrhages - pathology ; Ischemia ; Learning algorithms ; Machine learning ; Male ; Medical prognosis ; Medical research ; Medical treatment ; Medicine ; Models, Theoretical ; Morbidity ; Neural networks ; Neural Networks (Computer) ; Patients ; Predictions ; Prognosis ; Regression analysis ; Regression models ; Risk groups ; ROC Curve ; Stroke ; Stroke - etiology ; Stroke - therapy ; Stroke patients ; Studies ; Success ; Support Vector Machine ; Treatment Outcome ; Veins & arteries</subject><ispartof>PloS one, 2014-02, Vol.9 (2), p.e88225-e88225</ispartof><rights>COPYRIGHT 2014 Public Library of Science</rights><rights>2014 Asadi et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2014 Asadi et al 2014 Asadi et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c758t-f8c91d676adae7d3032a724ee591f0e41250010799a7f792f8b6b5b20ab68be23</citedby><cites>FETCH-LOGICAL-c758t-f8c91d676adae7d3032a724ee591f0e41250010799a7f792f8b6b5b20ab68be23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1497948464/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1497948464?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24520356$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Gómez, Sergio</contributor><creatorcontrib>Asadi, Hamed</creatorcontrib><creatorcontrib>Dowling, Richard</creatorcontrib><creatorcontrib>Yan, Bernard</creatorcontrib><creatorcontrib>Mitchell, Peter</creatorcontrib><title>Machine learning for outcome prediction of acute ischemic stroke post intra-arterial therapy</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Stroke is a major cause of death and disability. Accurately predicting stroke outcome from a set of predictive variables may identify high-risk patients and guide treatment approaches, leading to decreased morbidity. Logistic regression models allow for the identification and validation of predictive variables. However, advanced machine learning algorithms offer an alternative, in particular, for large-scale multi-institutional data, with the advantage of easily incorporating newly available data to improve prediction performance. Our aim was to design and compare different machine learning methods, capable of predicting the outcome of endovascular intervention in acute anterior circulation ischaemic stroke.
We conducted a retrospective study of a prospectively collected database of acute ischaemic stroke treated by endovascular intervention. Using SPSS®, MATLAB®, and Rapidminer®, classical statistics as well as artificial neural network and support vector algorithms were applied to design a supervised machine capable of classifying these predictors into potential good and poor outcomes. These algorithms were trained, validated and tested using randomly divided data.
We included 107 consecutive acute anterior circulation ischaemic stroke patients treated by endovascular technique. Sixty-six were male and the mean age of 65.3. All the available demographic, procedural and clinical factors were included into the models. The final confusion matrix of the neural network, demonstrated an overall congruency of ∼ 80% between the target and output classes, with favourable receiving operative characteristics. However, after optimisation, the support vector machine had a relatively better performance, with a root mean squared error of 2.064 (SD: ± 0.408).
We showed promising accuracy of outcome prediction, using supervised machine learning algorithms, with potential for incorporation of larger multicenter datasets, likely further improving prediction. Finally, we propose that a robust machine learning system can potentially optimise the selection process for endovascular versus medical treatment in the management of acute stroke.</description><subject>Adult</subject><subject>Aged</subject><subject>Algorithms</subject><subject>Artificial Intelligence</subject><subject>Artificial neural networks</subject><subject>Blood</subject><subject>Brain Ischemia - etiology</subject><subject>Brain Ischemia - therapy</subject><subject>Cardiovascular system</subject><subject>Care and treatment</subject><subject>Computer Science</subject><subject>Data mining</subject><subject>Demographics</subject><subject>Endovascular Procedures - adverse effects</subject><subject>FDA approval</subject><subject>Female</subject><subject>Humans</subject><subject>International cooperation</subject><subject>Intervention</subject><subject>Intracranial Hemorrhages - pathology</subject><subject>Ischemia</subject><subject>Learning algorithms</subject><subject>Machine learning</subject><subject>Male</subject><subject>Medical prognosis</subject><subject>Medical research</subject><subject>Medical treatment</subject><subject>Medicine</subject><subject>Models, Theoretical</subject><subject>Morbidity</subject><subject>Neural networks</subject><subject>Neural Networks (Computer)</subject><subject>Patients</subject><subject>Predictions</subject><subject>Prognosis</subject><subject>Regression analysis</subject><subject>Regression models</subject><subject>Risk groups</subject><subject>ROC Curve</subject><subject>Stroke</subject><subject>Stroke - etiology</subject><subject>Stroke - therapy</subject><subject>Stroke patients</subject><subject>Studies</subject><subject>Success</subject><subject>Support Vector Machine</subject><subject>Treatment Outcome</subject><subject>Veins & arteries</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk12L1DAUhoso7rr6D0QLgujFjPlok-ZGWBY_BlYW_LoSwml6Os3aacYkFfffm-50lxnZC8lFw-lz3uS8OSfLnlKypFzSN5du9AP0y60bcElIVTFW3suOqeJsIRjh9_f2R9mjEC4JKXklxMPsiBVlipbiOPvxCUxnB8x7BD_YYZ23zudujMZtMN96bKyJ1g25a3MwY8TcBtPhxpo8RO9-JsaFmNsheliAj-gt9Hns0MP26nH2oIU-4JP5e5J9e__u69nHxfnFh9XZ6fnCyLKKi7YyijZCCmgAZcMJZyBZgVgq2hIsKCsJoUQqBbKVirVVLeqyZgRqUdXI-En2fKe77V3QszFB00JJVVSFKBKx2hGNg0u99XYD_ko7sPo64Pxap8tb06MGNJVsGqLAyKJoRS2IaDlVKJghFEzSejufNtYbbAxOtfcHood_BtvptfutuaJKcpEEXs0C3v0aMUS9SaZi38OAbry-t6JclbxM6It_0Lurm6k1pALs0Lp0rplE9Wkhq4qK5HOilndQaTXTc6Yuam2KHyS8PkhITMQ_cQ1jCHr15fP_sxffD9mXe2yH0McuuH6c-iwcgsUONN6F4LG9NZkSPQ3BjRt6GgI9D0FKe7b_QLdJN13P_wKBvwKf</recordid><startdate>20140210</startdate><enddate>20140210</enddate><creator>Asadi, Hamed</creator><creator>Dowling, Richard</creator><creator>Yan, Bernard</creator><creator>Mitchell, Peter</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20140210</creationdate><title>Machine learning for outcome prediction of acute ischemic stroke post intra-arterial therapy</title><author>Asadi, Hamed ; Dowling, Richard ; Yan, Bernard ; Mitchell, Peter</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c758t-f8c91d676adae7d3032a724ee591f0e41250010799a7f792f8b6b5b20ab68be23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Algorithms</topic><topic>Artificial Intelligence</topic><topic>Artificial neural networks</topic><topic>Blood</topic><topic>Brain Ischemia - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Asadi, Hamed</au><au>Dowling, Richard</au><au>Yan, Bernard</au><au>Mitchell, Peter</au><au>Gómez, Sergio</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Machine learning for outcome prediction of acute ischemic stroke post intra-arterial therapy</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-02-10</date><risdate>2014</risdate><volume>9</volume><issue>2</issue><spage>e88225</spage><epage>e88225</epage><pages>e88225-e88225</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Stroke is a major cause of death and disability. Accurately predicting stroke outcome from a set of predictive variables may identify high-risk patients and guide treatment approaches, leading to decreased morbidity. Logistic regression models allow for the identification and validation of predictive variables. However, advanced machine learning algorithms offer an alternative, in particular, for large-scale multi-institutional data, with the advantage of easily incorporating newly available data to improve prediction performance. Our aim was to design and compare different machine learning methods, capable of predicting the outcome of endovascular intervention in acute anterior circulation ischaemic stroke.
We conducted a retrospective study of a prospectively collected database of acute ischaemic stroke treated by endovascular intervention. Using SPSS®, MATLAB®, and Rapidminer®, classical statistics as well as artificial neural network and support vector algorithms were applied to design a supervised machine capable of classifying these predictors into potential good and poor outcomes. These algorithms were trained, validated and tested using randomly divided data.
We included 107 consecutive acute anterior circulation ischaemic stroke patients treated by endovascular technique. Sixty-six were male and the mean age of 65.3. All the available demographic, procedural and clinical factors were included into the models. The final confusion matrix of the neural network, demonstrated an overall congruency of ∼ 80% between the target and output classes, with favourable receiving operative characteristics. However, after optimisation, the support vector machine had a relatively better performance, with a root mean squared error of 2.064 (SD: ± 0.408).
We showed promising accuracy of outcome prediction, using supervised machine learning algorithms, with potential for incorporation of larger multicenter datasets, likely further improving prediction. Finally, we propose that a robust machine learning system can potentially optimise the selection process for endovascular versus medical treatment in the management of acute stroke.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24520356</pmid><doi>10.1371/journal.pone.0088225</doi><tpages>e88225</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adult Aged Algorithms Artificial Intelligence Artificial neural networks Blood Brain Ischemia - etiology Brain Ischemia - therapy Cardiovascular system Care and treatment Computer Science Data mining Demographics Endovascular Procedures - adverse effects FDA approval Female Humans International cooperation Intervention Intracranial Hemorrhages - pathology Ischemia Learning algorithms Machine learning Male Medical prognosis Medical research Medical treatment Medicine Models, Theoretical Morbidity Neural networks Neural Networks (Computer) Patients Predictions Prognosis Regression analysis Regression models Risk groups ROC Curve Stroke Stroke - etiology Stroke - therapy Stroke patients Studies Success Support Vector Machine Treatment Outcome Veins & arteries |
title | Machine learning for outcome prediction of acute ischemic stroke post intra-arterial therapy |
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