Identification of major planktonic sulfur oxidizers in stratified freshwater lake

Planktonic sulfur oxidizers are important constituents of ecosystems in stratified water bodies, and contribute to sulfide detoxification. In contrast to marine environments, taxonomic identities of major planktonic sulfur oxidizers in freshwater lakes still remain largely unknown. Bacterioplankton...

Full description

Saved in:
Bibliographic Details
Published in:PloS one 2014-04, Vol.9 (4), p.e93877-e93877
Main Authors: Kojima, Hisaya, Watanabe, Tomohiro, Iwata, Tomoya, Fukui, Manabu
Format: Article
Language:English
Subjects:
Adenosine
Analysis
Aquatic ecosystems
Bacteria
Bacterioplankton
Betaproteobacteria - genetics
Biodiversity
Biology and Life Sciences
Cloning
Community structure
Deoxyribonucleic acid
Detoxification
DNA
DNA, Bacterial - genetics
Earth Sciences
Ecology and Environmental Sciences
Ecosystems
Environmental aspects
Fresh Water - microbiology
Freshwater lakes
Genes
Genetic aspects
Genetic testing
Japan
Lakes
Marine environment
Offshore structures
Oxidation
Oxidizing agents
Plankton
Plankton - genetics
Prokaryotes
RNA
RNA, Ribosomal, 16S - genetics
rRNA 16S
Stratified water
Studies
Sulfide
Sulfur
Sulfur - metabolism
Sulfur oxidation
Sulfur-oxidizing bacteria
Taxonomy
Water depth
Water Microbiology
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53
cites cdi_FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53
container_end_page e93877
container_issue 4
container_start_page e93877
container_title PloS one
container_volume 9
creator Kojima, Hisaya
Watanabe, Tomohiro
Iwata, Tomoya
Fukui, Manabu
description Planktonic sulfur oxidizers are important constituents of ecosystems in stratified water bodies, and contribute to sulfide detoxification. In contrast to marine environments, taxonomic identities of major planktonic sulfur oxidizers in freshwater lakes still remain largely unknown. Bacterioplankton community structure was analyzed in a stratified freshwater lake, Lake Mizugaki in Japan. In the clone libraries of 16S rRNA gene, clones very closely related to a sulfur oxidizer isolated from this lake, Sulfuritalea hydrogenivorans, were detected in deep anoxic water, and occupied up to 12.5% in each library of different water depth. Assemblages of planktonic sulfur oxidizers were specifically analyzed by constructing clone libraries of genes involved in sulfur oxidation, aprA, dsrA, soxB and sqr. In the libraries, clones related to betaproteobacteria were detected with high frequencies, including the close relatives of Sulfuritalea hydrogenivorans.
doi_str_mv 10.1371/journal.pone.0093877
format article
fullrecord <record><control><sourceid>gale_plos_</sourceid><recordid>TN_cdi_plos_journals_1512317418</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A375583124</galeid><doaj_id>oai_doaj_org_article_98bdbd2b94c74a1c9fae38eb4825d902</doaj_id><sourcerecordid>A375583124</sourcerecordid><originalsourceid>FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53</originalsourceid><addsrcrecordid>eNqNkl1v0zAYhSMEYmPwDxBEQkJw0eLPxLlBmiY-Kk2a-Ly1HPt1686Ni53A4NfjrtnUoF2gXCRynnPs9_gUxVOM5pjW-M06DLFTfr4NHcwRaqio63vFMW4omVUE0fsH30fFo5TWCHEqquphcURY1XBO-XHxaWGg6511WvUudGWw5UatQyy3XnWXfeicLtPg7RDLcOWM-wMxla4rUx_VTgamtBHS6pfqIZZeXcLj4oFVPsGT8X1SfHv_7uvZx9n5xYfF2en5TAtE-llNK2Q5xZWyWLSo4ljXgiFcK2aoYYJq3nCw2gC1tIKqtqArwrnQOGuA05Pi-d5360OSYxpJYo4JxTXDIhOLPWGCWsttdBsVf8ugnLxeCHEpVeyd9iAb0ZrWkLZhumYK68YqoAJaJgg3DSLZ6-2429BuwOgcWlR-Yjr907mVXIafkjZ5UkKzwavRIIYfA6ReblzS4HPMEIbrc1PE6nwzGX3xD3r3dCO1VHkA19mQ99U7U3lK6xwUxYRlan4HlR8DG6dzdazL6xPB64kgMz1c9Us1pCQXXz7_P3vxfcq-PGBXoHy_SsEPu9alKcj2oI4hpQj2NmSM5K75N2nIXfPl2Pwse3Z4Qbeim6rTv_pS_kY</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1512317418</pqid></control><display><type>article</type><title>Identification of major planktonic sulfur oxidizers in stratified freshwater lake</title><source>PubMed Central (PMC)</source><source>ProQuest - Publicly Available Content Database</source><creator>Kojima, Hisaya ; Watanabe, Tomohiro ; Iwata, Tomoya ; Fukui, Manabu</creator><contributor>Lin, Baochuan</contributor><creatorcontrib>Kojima, Hisaya ; Watanabe, Tomohiro ; Iwata, Tomoya ; Fukui, Manabu ; Lin, Baochuan</creatorcontrib><description>Planktonic sulfur oxidizers are important constituents of ecosystems in stratified water bodies, and contribute to sulfide detoxification. In contrast to marine environments, taxonomic identities of major planktonic sulfur oxidizers in freshwater lakes still remain largely unknown. Bacterioplankton community structure was analyzed in a stratified freshwater lake, Lake Mizugaki in Japan. In the clone libraries of 16S rRNA gene, clones very closely related to a sulfur oxidizer isolated from this lake, Sulfuritalea hydrogenivorans, were detected in deep anoxic water, and occupied up to 12.5% in each library of different water depth. Assemblages of planktonic sulfur oxidizers were specifically analyzed by constructing clone libraries of genes involved in sulfur oxidation, aprA, dsrA, soxB and sqr. In the libraries, clones related to betaproteobacteria were detected with high frequencies, including the close relatives of Sulfuritalea hydrogenivorans.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0093877</identifier><identifier>PMID: 24695535</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adenosine ; Analysis ; Aquatic ecosystems ; Bacteria ; Bacterioplankton ; Betaproteobacteria - genetics ; Biodiversity ; Biology and Life Sciences ; Cloning ; Community structure ; Deoxyribonucleic acid ; Detoxification ; DNA ; DNA, Bacterial - genetics ; Earth Sciences ; Ecology and Environmental Sciences ; Ecosystems ; Environmental aspects ; Fresh Water - microbiology ; Freshwater lakes ; Genes ; Genetic aspects ; Genetic testing ; Japan ; Lakes ; Marine environment ; Offshore structures ; Oxidation ; Oxidizing agents ; Plankton ; Plankton - genetics ; Prokaryotes ; RNA ; RNA, Ribosomal, 16S - genetics ; rRNA 16S ; Stratified water ; Studies ; Sulfide ; Sulfur ; Sulfur - metabolism ; Sulfur oxidation ; Sulfur-oxidizing bacteria ; Taxonomy ; Water depth ; Water Microbiology</subject><ispartof>PloS one, 2014-04, Vol.9 (4), p.e93877-e93877</ispartof><rights>COPYRIGHT 2014 Public Library of Science</rights><rights>2014 Kojima et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2014 Kojima et al 2014 Kojima et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53</citedby><cites>FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1512317418/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1512317418?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25751,27922,27923,37010,37011,44588,53789,53791,74896</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24695535$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Lin, Baochuan</contributor><creatorcontrib>Kojima, Hisaya</creatorcontrib><creatorcontrib>Watanabe, Tomohiro</creatorcontrib><creatorcontrib>Iwata, Tomoya</creatorcontrib><creatorcontrib>Fukui, Manabu</creatorcontrib><title>Identification of major planktonic sulfur oxidizers in stratified freshwater lake</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Planktonic sulfur oxidizers are important constituents of ecosystems in stratified water bodies, and contribute to sulfide detoxification. In contrast to marine environments, taxonomic identities of major planktonic sulfur oxidizers in freshwater lakes still remain largely unknown. Bacterioplankton community structure was analyzed in a stratified freshwater lake, Lake Mizugaki in Japan. In the clone libraries of 16S rRNA gene, clones very closely related to a sulfur oxidizer isolated from this lake, Sulfuritalea hydrogenivorans, were detected in deep anoxic water, and occupied up to 12.5% in each library of different water depth. Assemblages of planktonic sulfur oxidizers were specifically analyzed by constructing clone libraries of genes involved in sulfur oxidation, aprA, dsrA, soxB and sqr. In the libraries, clones related to betaproteobacteria were detected with high frequencies, including the close relatives of Sulfuritalea hydrogenivorans.</description><subject>Adenosine</subject><subject>Analysis</subject><subject>Aquatic ecosystems</subject><subject>Bacteria</subject><subject>Bacterioplankton</subject><subject>Betaproteobacteria - genetics</subject><subject>Biodiversity</subject><subject>Biology and Life Sciences</subject><subject>Cloning</subject><subject>Community structure</subject><subject>Deoxyribonucleic acid</subject><subject>Detoxification</subject><subject>DNA</subject><subject>DNA, Bacterial - genetics</subject><subject>Earth Sciences</subject><subject>Ecology and Environmental Sciences</subject><subject>Ecosystems</subject><subject>Environmental aspects</subject><subject>Fresh Water - microbiology</subject><subject>Freshwater lakes</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic testing</subject><subject>Japan</subject><subject>Lakes</subject><subject>Marine environment</subject><subject>Offshore structures</subject><subject>Oxidation</subject><subject>Oxidizing agents</subject><subject>Plankton</subject><subject>Plankton - genetics</subject><subject>Prokaryotes</subject><subject>RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>rRNA 16S</subject><subject>Stratified water</subject><subject>Studies</subject><subject>Sulfide</subject><subject>Sulfur</subject><subject>Sulfur - metabolism</subject><subject>Sulfur oxidation</subject><subject>Sulfur-oxidizing bacteria</subject><subject>Taxonomy</subject><subject>Water depth</subject><subject>Water Microbiology</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNkl1v0zAYhSMEYmPwDxBEQkJw0eLPxLlBmiY-Kk2a-Ly1HPt1686Ni53A4NfjrtnUoF2gXCRynnPs9_gUxVOM5pjW-M06DLFTfr4NHcwRaqio63vFMW4omVUE0fsH30fFo5TWCHEqquphcURY1XBO-XHxaWGg6511WvUudGWw5UatQyy3XnWXfeicLtPg7RDLcOWM-wMxla4rUx_VTgamtBHS6pfqIZZeXcLj4oFVPsGT8X1SfHv_7uvZx9n5xYfF2en5TAtE-llNK2Q5xZWyWLSo4ljXgiFcK2aoYYJq3nCw2gC1tIKqtqArwrnQOGuA05Pi-d5360OSYxpJYo4JxTXDIhOLPWGCWsttdBsVf8ugnLxeCHEpVeyd9iAb0ZrWkLZhumYK68YqoAJaJgg3DSLZ6-2429BuwOgcWlR-Yjr907mVXIafkjZ5UkKzwavRIIYfA6ReblzS4HPMEIbrc1PE6nwzGX3xD3r3dCO1VHkA19mQ99U7U3lK6xwUxYRlan4HlR8DG6dzdazL6xPB64kgMz1c9Us1pCQXXz7_P3vxfcq-PGBXoHy_SsEPu9alKcj2oI4hpQj2NmSM5K75N2nIXfPl2Pwse3Z4Qbeim6rTv_pS_kY</recordid><startdate>20140401</startdate><enddate>20140401</enddate><creator>Kojima, Hisaya</creator><creator>Watanabe, Tomohiro</creator><creator>Iwata, Tomoya</creator><creator>Fukui, Manabu</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20140401</creationdate><title>Identification of major planktonic sulfur oxidizers in stratified freshwater lake</title><author>Kojima, Hisaya ; Watanabe, Tomohiro ; Iwata, Tomoya ; Fukui, Manabu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Adenosine</topic><topic>Analysis</topic><topic>Aquatic ecosystems</topic><topic>Bacteria</topic><topic>Bacterioplankton</topic><topic>Betaproteobacteria - genetics</topic><topic>Biodiversity</topic><topic>Biology and Life Sciences</topic><topic>Cloning</topic><topic>Community structure</topic><topic>Deoxyribonucleic acid</topic><topic>Detoxification</topic><topic>DNA</topic><topic>DNA, Bacterial - genetics</topic><topic>Earth Sciences</topic><topic>Ecology and Environmental Sciences</topic><topic>Ecosystems</topic><topic>Environmental aspects</topic><topic>Fresh Water - microbiology</topic><topic>Freshwater lakes</topic><topic>Genes</topic><topic>Genetic aspects</topic><topic>Genetic testing</topic><topic>Japan</topic><topic>Lakes</topic><topic>Marine environment</topic><topic>Offshore structures</topic><topic>Oxidation</topic><topic>Oxidizing agents</topic><topic>Plankton</topic><topic>Plankton - genetics</topic><topic>Prokaryotes</topic><topic>RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>rRNA 16S</topic><topic>Stratified water</topic><topic>Studies</topic><topic>Sulfide</topic><topic>Sulfur</topic><topic>Sulfur - metabolism</topic><topic>Sulfur oxidation</topic><topic>Sulfur-oxidizing bacteria</topic><topic>Taxonomy</topic><topic>Water depth</topic><topic>Water Microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kojima, Hisaya</creatorcontrib><creatorcontrib>Watanabe, Tomohiro</creatorcontrib><creatorcontrib>Iwata, Tomoya</creatorcontrib><creatorcontrib>Fukui, Manabu</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Opposing Viewpoints</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>ProQuest Nursing and Allied Health Journals</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Meteorological &amp; Geoastrophysical Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest_Health &amp; Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database (ProQuest Medical &amp; Health Databases)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science &amp; Engineering Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>Advanced Technologies &amp; Aerospace Database‎ (1962 - current)</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Nursing &amp; Allied Health Database (Alumni Edition)</collection><collection>Meteorological &amp; Geoastrophysical Abstracts - Academic</collection><collection>ProQuest Engineering Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agriculture Science Database</collection><collection>Health &amp; Medical Collection (Alumni Edition)</collection><collection>PML(ProQuest Medical Library)</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Nursing &amp; Allied Health Premium</collection><collection>Advanced Technologies &amp; Aerospace Database</collection><collection>ProQuest Advanced Technologies &amp; Aerospace Collection</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Materials Science Collection</collection><collection>ProQuest - Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Engineering Collection</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kojima, Hisaya</au><au>Watanabe, Tomohiro</au><au>Iwata, Tomoya</au><au>Fukui, Manabu</au><au>Lin, Baochuan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of major planktonic sulfur oxidizers in stratified freshwater lake</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2014-04-01</date><risdate>2014</risdate><volume>9</volume><issue>4</issue><spage>e93877</spage><epage>e93877</epage><pages>e93877-e93877</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Planktonic sulfur oxidizers are important constituents of ecosystems in stratified water bodies, and contribute to sulfide detoxification. In contrast to marine environments, taxonomic identities of major planktonic sulfur oxidizers in freshwater lakes still remain largely unknown. Bacterioplankton community structure was analyzed in a stratified freshwater lake, Lake Mizugaki in Japan. In the clone libraries of 16S rRNA gene, clones very closely related to a sulfur oxidizer isolated from this lake, Sulfuritalea hydrogenivorans, were detected in deep anoxic water, and occupied up to 12.5% in each library of different water depth. Assemblages of planktonic sulfur oxidizers were specifically analyzed by constructing clone libraries of genes involved in sulfur oxidation, aprA, dsrA, soxB and sqr. In the libraries, clones related to betaproteobacteria were detected with high frequencies, including the close relatives of Sulfuritalea hydrogenivorans.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>24695535</pmid><doi>10.1371/journal.pone.0093877</doi><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1932-6203
ispartof PloS one, 2014-04, Vol.9 (4), p.e93877-e93877
issn 1932-6203
1932-6203
language eng
recordid cdi_plos_journals_1512317418
source PubMed Central (PMC); ProQuest - Publicly Available Content Database
subjects Adenosine
Analysis
Aquatic ecosystems
Bacteria
Bacterioplankton
Betaproteobacteria - genetics
Biodiversity
Biology and Life Sciences
Cloning
Community structure
Deoxyribonucleic acid
Detoxification
DNA
DNA, Bacterial - genetics
Earth Sciences
Ecology and Environmental Sciences
Ecosystems
Environmental aspects
Fresh Water - microbiology
Freshwater lakes
Genes
Genetic aspects
Genetic testing
Japan
Lakes
Marine environment
Offshore structures
Oxidation
Oxidizing agents
Plankton
Plankton - genetics
Prokaryotes
RNA
RNA, Ribosomal, 16S - genetics
rRNA 16S
Stratified water
Studies
Sulfide
Sulfur
Sulfur - metabolism
Sulfur oxidation
Sulfur-oxidizing bacteria
Taxonomy
Water depth
Water Microbiology
title Identification of major planktonic sulfur oxidizers in stratified freshwater lake
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-14T07%3A51%3A56IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_plos_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Identification%20of%20major%20planktonic%20sulfur%20oxidizers%20in%20stratified%20freshwater%20lake&rft.jtitle=PloS%20one&rft.au=Kojima,%20Hisaya&rft.date=2014-04-01&rft.volume=9&rft.issue=4&rft.spage=e93877&rft.epage=e93877&rft.pages=e93877-e93877&rft.issn=1932-6203&rft.eissn=1932-6203&rft_id=info:doi/10.1371/journal.pone.0093877&rft_dat=%3Cgale_plos_%3EA375583124%3C/gale_plos_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c802t-7360f5316af18b0651c784017a4d3d483c595efcde3f36e67fec62558c116ae53%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1512317418&rft_id=info:pmid/24695535&rft_galeid=A375583124&rfr_iscdi=true