Post-PKS tailoring steps of a disaccharide-containing polyene NPP in Pseudonocardia autotrophica

• Published in: PloS one 2015-04, Vol.10 (4), p.e0123270
• Main Authors: Kim, Hye-Jin, Kim, Min-Kyung, Lee, Mi-Jin, Won, Hyung-Jin, Choi, Si-Sun, Kim, Eung-Soo
• Format: Article
• Language: English
• Subjects: Actinomycetales - drug effects; Actinomycetales - enzymology; Actinomycetes; Amino Acid Sequence; Amino acids; Anti-Bacterial Agents - pharmacology; Antibiotics; Antifungal agents; Bioengineering; Biosynthesis; Biosynthetic Pathways; Cloning; Complementation; Cytochrome; Disaccharides; Disaccharides - chemistry; E coli; Escherichia coli; Fungal infections; Gene deletion; Genes; Genetic engineering; Genomes; Glucosamine; Glucose; Glycosyltransferase; Hydroxylase; Hydroxylation; Molecular Sequence Data; Mutagenesis; N-Acetylglucosamine; Nystatin; Nystatin - pharmacology; Physiological aspects; Plasmids; Polyenes - pharmacology; Polyketide Synthases - metabolism; Pseudonocardia; Sequence Homology, Amino Acid; Site-directed mutagenesis; Solubility; Streptomyces; Sugar
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0123270

A novel polyene compound NPP identified in a rare actinomycetes, Pseudonocardia autotrophica KCTC9441, was shown to contain an aglycone identical to nystatin but to harbor a unique di-sugar moiety, mycosaminyl-(α1-4)-N-acetyl-glucosamine, which led to higher solubility and reduced hemolytic activity. Although the nppDI was proved to be responsible for the transfer of first polyene sugar, mycosamine in NPP biosynthesis, the gene responsible for the second sugar extending glycosyltransferase (GT) as well as NPP post-PKS tailoring mechanism remained unknown. Here, we identified a NPP-specific second sugar extending GT gene named nppY, located at the edge of the NPP biosynthetic gene cluster. Targeted nppY gene deletion and its complementation proved that nppY is indeed responsible for the transfer of second sugar, N-acetyl-glucosamine in NPP biosynthesis. Site-directed mutagenesis on nppY also revealed several amino acid residues critical for NppY GT function. Moreover, a combination of deletions and complementations of two GT genes (nppDI and nppY) and one P450 hydroxylase gene (nppL) involved in the NPP post-PKS biosynthesis revealed that NPP aglycone is sequentially modified by the two different GTs encoded by nppDI and nppY, respectively, followed by the nppL-driven regio-specific hydroxylation at the NPP C10 position. These results set the stage for the biotechnological application of sugar diversification for the biosynthesis of novel polyene compounds in actinomycetes.