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Intragenic Locus in Human PIWIL2 Gene Shares Promoter and Enhancer Functions
Recently, more evidence supporting common nature of promoters and enhancers has been accumulated. In this work, we present data on chromatin modifications and non-polyadenylated transcription characteristic for enhancers as well as results of in vitro luciferase reporter assays suggesting that PIWIL...
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Published in: | PloS one 2016-06, Vol.11 (6), p.e0156454-e0156454 |
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description | Recently, more evidence supporting common nature of promoters and enhancers has been accumulated. In this work, we present data on chromatin modifications and non-polyadenylated transcription characteristic for enhancers as well as results of in vitro luciferase reporter assays suggesting that PIWIL2 alternative promoter in exon 7 also functions as an enhancer for gene PHYHIP located 60Kb upstream. This finding of an intragenic enhancer serving as a promoter for a shorter protein isoform implies broader impact on understanding enhancer-promoter networks in regulation of gene expression. |
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This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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metabolism</subject><subject>Polyadenylation</subject><subject>Promoter Regions, Genetic</subject><subject>Promoters (Genetics)</subject><subject>Proteins</subject><subject>Research and Analysis Methods</subject><subject>RNA, Messenger - metabolism</subject><subject>Testicular cancer</subject><subject>Transcription</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk1trFDEUxwdRbK1-A9EBQfRh1yST27wIpfQysNBivTyGJJPZTZlJtsmM6Lc3052WHSkoecjtd_455-ScLHsNwRIWDH668UNwsl1uvTNLAAnFBD_JDmFZoAVFoHi6tz7IXsR4AwApOKXPswPEEOa4LA-zVeX6INfGWZ2vvB5ibl1-MXTS5VfVj2qF8nPjTH69kcHE_Cr4zvcm5NLV-anbSKfT5mxwurfexZfZs0a20bya5qPs29np15OLxeryvDo5Xi00Q6RfYKoLijkAXCpFCcMYKACMlIgjAlStiSKNVCXTHGKoWUFqRDEsAcEKNQQUR9nbne629VFMiYgCshQvRBiORLUjai9vxDbYTobfwksr7g58WAsZeqtbIxrEa1aU1NS1wgYxLpnEuigZoEwpTZLW5-m1QXWm1mbMWDsTnd84uxFr_1NgzktAR2c-TALB3w4m9qKzUZu2lc74IfnNAadjqOTfaAqxBBAilNB3f6GPJ2Ki1jLFal3jk4t6FBXHOJUD5rRgiVo-QqVRm87qVGCNTeczg48zg8T05le_lkOMorr-8v_s5fc5-36P3RjZ9pvo2-GuvOYg3oE6-BiDaR7-AwIx9sd9NsTYH2Lqj2T2Zv8vH4zuG6L4A-eyB1w</recordid><startdate>20160601</startdate><enddate>20160601</enddate><creator>Skvortsova, Yulia V</creator><creator>Kondratieva, Sofia A</creator><creator>Zinovyeva, Marina V</creator><creator>Nikolaev, Lev G</creator><creator>Azhikina, Tatyana L</creator><creator>Gainetdinov, Ildar V</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-1719-043X</orcidid></search><sort><creationdate>20160601</creationdate><title>Intragenic Locus in Human PIWIL2 Gene Shares Promoter and Enhancer Functions</title><author>Skvortsova, Yulia V ; Kondratieva, Sofia A ; Zinovyeva, Marina V ; Nikolaev, Lev G ; Azhikina, Tatyana L ; Gainetdinov, Ildar V</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c725t-46c3648008abb657440b00eaa28250bdc5b5fab97c8141c735d26419054b2f503</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Argonaute Proteins - 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subjects | Argonaute Proteins - genetics Biology and Life Sciences Cell cycle Cell Line, Tumor Chromatin Chromatin - metabolism Computer Simulation Deoxyribonucleic acid DNA DNA binding proteins Enhancer Elements, Genetic Enhancers Epigenetics Exons Gene expression Genetic aspects Genetic regulation Genomes Genomics Humans Medical research Medicine and Health Sciences Physiological aspects Poly A - metabolism Polyadenylation Promoter Regions, Genetic Promoters (Genetics) Proteins Research and Analysis Methods RNA, Messenger - metabolism Testicular cancer Transcription |
title | Intragenic Locus in Human PIWIL2 Gene Shares Promoter and Enhancer Functions |
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