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Early Outcomes Of Decentralized Care for Rifampicin-Resistant Tuberculosis in Johannesburg, South Africa: An Observational Cohort Study
We describe baseline characteristics, time to treatment initiation and interim patient outcomes at a decentralized, outpatient treatment site for rifampicin-resistant TB (RR-TB). Prospective observational cohort study of RR-TB patients from March 2013 until December 2014. Study subjects were followe...
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Published in: | PloS one 2016-11, Vol.11 (11), p.e0164974-e0164974 |
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description | We describe baseline characteristics, time to treatment initiation and interim patient outcomes at a decentralized, outpatient treatment site for rifampicin-resistant TB (RR-TB).
Prospective observational cohort study of RR-TB patients from March 2013 until December 2014. Study subjects were followed until completion of the intensive phase of treatment (6 months), transfer out, or a final outcome (loss from treatment (LFT) or death).
214 patients with RR-TB were enrolled in the study. Xpert MTB/RIF was the diagnostic test of rifampicin resistance for 87% (n = 186), followed by direct PCR on AFB positive specimen in 14 (7%) and indirect PCR on cultured isolate in 5 (2%). Median time between sputum testing and treatment initiation was 10 days (IQR 6-21). Interim outcomes were available in 148 patients of whom 78% (n = 115) were still on treatment, 9% (n = 13) had died, and 14% (n = 20) were LFT. Amongst 131 patients with culture positive pulmonary TB, 85 (64.9%) were culture negative at 6 months, 12 were still sputum culture positive (9.2%) and 34 had no culture documented or contaminated culture (26%). Patients who initiated as outpatients within 1 week of sputum collection for diagnosis of RR-TB had a significantly lower incidence of LFT (IRR 0.30, 95% CI: 0.09-0.98). HIV co-infection occurred in 178 patients (83%) with a median CD4 count 88 cells/ml3 (IQR 27-218).
Access to decentralized treatment coupled with the rapid diagnosis of RR-TB has resulted in short time to treatment initiation. Despite the lack of treatment delays, early treatment outcomes remain poor with high rates of death and loss from care. |
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Prospective observational cohort study of RR-TB patients from March 2013 until December 2014. Study subjects were followed until completion of the intensive phase of treatment (6 months), transfer out, or a final outcome (loss from treatment (LFT) or death).
214 patients with RR-TB were enrolled in the study. Xpert MTB/RIF was the diagnostic test of rifampicin resistance for 87% (n = 186), followed by direct PCR on AFB positive specimen in 14 (7%) and indirect PCR on cultured isolate in 5 (2%). Median time between sputum testing and treatment initiation was 10 days (IQR 6-21). Interim outcomes were available in 148 patients of whom 78% (n = 115) were still on treatment, 9% (n = 13) had died, and 14% (n = 20) were LFT. Amongst 131 patients with culture positive pulmonary TB, 85 (64.9%) were culture negative at 6 months, 12 were still sputum culture positive (9.2%) and 34 had no culture documented or contaminated culture (26%). Patients who initiated as outpatients within 1 week of sputum collection for diagnosis of RR-TB had a significantly lower incidence of LFT (IRR 0.30, 95% CI: 0.09-0.98). HIV co-infection occurred in 178 patients (83%) with a median CD4 count 88 cells/ml3 (IQR 27-218).
Access to decentralized treatment coupled with the rapid diagnosis of RR-TB has resulted in short time to treatment initiation. Despite the lack of treatment delays, early treatment outcomes remain poor with high rates of death and loss from care.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0164974</identifier><identifier>PMID: 27812140</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Acquired immune deficiency syndrome ; Adult ; AIDS ; Analysis ; Antiretroviral drugs ; Antitubercular Agents - pharmacology ; Antitubercular Agents - therapeutic use ; Biology and Life Sciences ; Care and treatment ; CD4 antigen ; Cell culture ; Clinical outcomes ; Cohort analysis ; Cohort Studies ; Diagnosis ; Diagnostic systems ; Drug resistance ; Drug Resistance, Bacterial ; Epidemiology ; Female ; Health economics ; Health sciences ; HIV ; Hospitals ; Human immunodeficiency virus ; Humans ; Internal medicine ; Lentivirus ; Male ; Medical diagnosis ; Medical research ; Medicine ; Medicine and Health Sciences ; Middle Aged ; Mycobacterium ; Observational studies ; Outcome Assessment (Health Care) ; Patient outcomes ; Patients ; Public sector ; Retroviridae ; Rifampin ; Rifampin - pharmacology ; South Africa ; Sputum ; Systematic review ; Time Factors ; Treatment Outcome ; Tuberculosis ; Tuberculosis, Pulmonary - drug therapy</subject><ispartof>PloS one, 2016-11, Vol.11 (11), p.e0164974-e0164974</ispartof><rights>COPYRIGHT 2016 Public Library of Science</rights><rights>2016 Berhanu et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2016 Berhanu et al 2016 Berhanu et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c725t-ca918a2d056437e3ff37dc0c15641dab5a470bd3ffa0fffb095bef4fc0d7947f3</citedby><cites>FETCH-LOGICAL-c725t-ca918a2d056437e3ff37dc0c15641dab5a470bd3ffa0fffb095bef4fc0d7947f3</cites><orcidid>0000-0002-9692-8748</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1835969831/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1835969831?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27812140$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Subbian, Selvakumar</contributor><creatorcontrib>Berhanu, Rebecca</creatorcontrib><creatorcontrib>Schnippel, Kathryn</creatorcontrib><creatorcontrib>Mohr, Erika</creatorcontrib><creatorcontrib>Hirasen, Kamban</creatorcontrib><creatorcontrib>Evans, Denise</creatorcontrib><creatorcontrib>Rosen, Sydney</creatorcontrib><creatorcontrib>Sanne, Ian</creatorcontrib><title>Early Outcomes Of Decentralized Care for Rifampicin-Resistant Tuberculosis in Johannesburg, South Africa: An Observational Cohort Study</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>We describe baseline characteristics, time to treatment initiation and interim patient outcomes at a decentralized, outpatient treatment site for rifampicin-resistant TB (RR-TB).
Prospective observational cohort study of RR-TB patients from March 2013 until December 2014. Study subjects were followed until completion of the intensive phase of treatment (6 months), transfer out, or a final outcome (loss from treatment (LFT) or death).
214 patients with RR-TB were enrolled in the study. Xpert MTB/RIF was the diagnostic test of rifampicin resistance for 87% (n = 186), followed by direct PCR on AFB positive specimen in 14 (7%) and indirect PCR on cultured isolate in 5 (2%). Median time between sputum testing and treatment initiation was 10 days (IQR 6-21). Interim outcomes were available in 148 patients of whom 78% (n = 115) were still on treatment, 9% (n = 13) had died, and 14% (n = 20) were LFT. Amongst 131 patients with culture positive pulmonary TB, 85 (64.9%) were culture negative at 6 months, 12 were still sputum culture positive (9.2%) and 34 had no culture documented or contaminated culture (26%). Patients who initiated as outpatients within 1 week of sputum collection for diagnosis of RR-TB had a significantly lower incidence of LFT (IRR 0.30, 95% CI: 0.09-0.98). HIV co-infection occurred in 178 patients (83%) with a median CD4 count 88 cells/ml3 (IQR 27-218).
Access to decentralized treatment coupled with the rapid diagnosis of RR-TB has resulted in short time to treatment initiation. Despite the lack of treatment delays, early treatment outcomes remain poor with high rates of death and loss from care.</description><subject>Acquired immune deficiency syndrome</subject><subject>Adult</subject><subject>AIDS</subject><subject>Analysis</subject><subject>Antiretroviral drugs</subject><subject>Antitubercular Agents - pharmacology</subject><subject>Antitubercular Agents - therapeutic use</subject><subject>Biology and Life Sciences</subject><subject>Care and treatment</subject><subject>CD4 antigen</subject><subject>Cell culture</subject><subject>Clinical outcomes</subject><subject>Cohort analysis</subject><subject>Cohort Studies</subject><subject>Diagnosis</subject><subject>Diagnostic systems</subject><subject>Drug resistance</subject><subject>Drug Resistance, Bacterial</subject><subject>Epidemiology</subject><subject>Female</subject><subject>Health economics</subject><subject>Health sciences</subject><subject>HIV</subject><subject>Hospitals</subject><subject>Human immunodeficiency virus</subject><subject>Humans</subject><subject>Internal medicine</subject><subject>Lentivirus</subject><subject>Male</subject><subject>Medical diagnosis</subject><subject>Medical research</subject><subject>Medicine</subject><subject>Medicine and Health Sciences</subject><subject>Middle Aged</subject><subject>Mycobacterium</subject><subject>Observational studies</subject><subject>Outcome Assessment (Health Care)</subject><subject>Patient outcomes</subject><subject>Patients</subject><subject>Public sector</subject><subject>Retroviridae</subject><subject>Rifampin</subject><subject>Rifampin - pharmacology</subject><subject>South Africa</subject><subject>Sputum</subject><subject>Systematic review</subject><subject>Time Factors</subject><subject>Treatment Outcome</subject><subject>Tuberculosis</subject><subject>Tuberculosis, Pulmonary - drug therapy</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNk9GK1DAUhoso7rr6BqIBQRScMWnStPFCGMZVRxYGZlZvQ5omM1naZkzSxfEFfG1Tp7tMZUHpRduT7_z5c05OkjxFcIpwjt5e2c61op7ubKumEFHCcnIvOUUMpxOaQnz_6PskeeT9FYQZLih9mJykeYFSROBp8utcuHoPll2QtlEeLDX4oKRqgxO1-akqMBdOAW0dWBktmp2Rpp2slDc-iDaAy65UTna1jQFgWvDFbkXbKl92bvMGrG0XtmCmnZHiHZi1YFl65a5FMDY6B3O7tS6Adeiq_ePkgRa1V0-G91ny9eP55fzz5GL5aTGfXUxknmZhIgVDhUgrmFGCc4W1xnkloUTxH1WizATJYVnFuIBa6xKyrFSaaAmrnJFc47Pk-UF3Fz3zoYaeowJnjLICo0gsDkRlxRXfOdMIt-dWGP4nYN2GCxeMrBWHOdRlUWWs0BlJadyhoGlKIc0ElpTJqPV-2K0rG1UNdR2Jjldas-Ube80zGN0yGgVeDQLOfu-UD7wxXqq6Fq2yXe-bUMxIFjv7bxTTHGcw7VVf_IXeXYiB2oh4VtNqGy3KXpTPSI4KWEDWU9M7qPhUqjEy3k1tYnyU8HqUEJmgfoSN6Lzni_Xq_9nltzH78ojdKlGHrbd11182PwbJAZTOeu-Uvu0HgrwfrZtq8H60-DBaMe3ZcS9vk25mCf8GPwkfIg</recordid><startdate>20161103</startdate><enddate>20161103</enddate><creator>Berhanu, Rebecca</creator><creator>Schnippel, Kathryn</creator><creator>Mohr, Erika</creator><creator>Hirasen, Kamban</creator><creator>Evans, Denise</creator><creator>Rosen, Sydney</creator><creator>Sanne, Ian</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-9692-8748</orcidid></search><sort><creationdate>20161103</creationdate><title>Early Outcomes Of Decentralized Care for Rifampicin-Resistant Tuberculosis in Johannesburg, South Africa: An Observational Cohort Study</title><author>Berhanu, Rebecca ; Schnippel, Kathryn ; Mohr, Erika ; Hirasen, Kamban ; Evans, Denise ; Rosen, Sydney ; Sanne, Ian</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c725t-ca918a2d056437e3ff37dc0c15641dab5a470bd3ffa0fffb095bef4fc0d7947f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Acquired immune deficiency syndrome</topic><topic>Adult</topic><topic>AIDS</topic><topic>Analysis</topic><topic>Antiretroviral drugs</topic><topic>Antitubercular Agents - pharmacology</topic><topic>Antitubercular Agents - therapeutic use</topic><topic>Biology and Life Sciences</topic><topic>Care and treatment</topic><topic>CD4 antigen</topic><topic>Cell culture</topic><topic>Clinical outcomes</topic><topic>Cohort analysis</topic><topic>Cohort Studies</topic><topic>Diagnosis</topic><topic>Diagnostic systems</topic><topic>Drug resistance</topic><topic>Drug Resistance, Bacterial</topic><topic>Epidemiology</topic><topic>Female</topic><topic>Health economics</topic><topic>Health sciences</topic><topic>HIV</topic><topic>Hospitals</topic><topic>Human immunodeficiency virus</topic><topic>Humans</topic><topic>Internal medicine</topic><topic>Lentivirus</topic><topic>Male</topic><topic>Medical diagnosis</topic><topic>Medical research</topic><topic>Medicine</topic><topic>Medicine and Health Sciences</topic><topic>Middle Aged</topic><topic>Mycobacterium</topic><topic>Observational studies</topic><topic>Outcome Assessment (Health Care)</topic><topic>Patient outcomes</topic><topic>Patients</topic><topic>Public sector</topic><topic>Retroviridae</topic><topic>Rifampin</topic><topic>Rifampin - 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Prospective observational cohort study of RR-TB patients from March 2013 until December 2014. Study subjects were followed until completion of the intensive phase of treatment (6 months), transfer out, or a final outcome (loss from treatment (LFT) or death).
214 patients with RR-TB were enrolled in the study. Xpert MTB/RIF was the diagnostic test of rifampicin resistance for 87% (n = 186), followed by direct PCR on AFB positive specimen in 14 (7%) and indirect PCR on cultured isolate in 5 (2%). Median time between sputum testing and treatment initiation was 10 days (IQR 6-21). Interim outcomes were available in 148 patients of whom 78% (n = 115) were still on treatment, 9% (n = 13) had died, and 14% (n = 20) were LFT. Amongst 131 patients with culture positive pulmonary TB, 85 (64.9%) were culture negative at 6 months, 12 were still sputum culture positive (9.2%) and 34 had no culture documented or contaminated culture (26%). Patients who initiated as outpatients within 1 week of sputum collection for diagnosis of RR-TB had a significantly lower incidence of LFT (IRR 0.30, 95% CI: 0.09-0.98). HIV co-infection occurred in 178 patients (83%) with a median CD4 count 88 cells/ml3 (IQR 27-218).
Access to decentralized treatment coupled with the rapid diagnosis of RR-TB has resulted in short time to treatment initiation. Despite the lack of treatment delays, early treatment outcomes remain poor with high rates of death and loss from care.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>27812140</pmid><doi>10.1371/journal.pone.0164974</doi><tpages>e0164974</tpages><orcidid>https://orcid.org/0000-0002-9692-8748</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Acquired immune deficiency syndrome Adult AIDS Analysis Antiretroviral drugs Antitubercular Agents - pharmacology Antitubercular Agents - therapeutic use Biology and Life Sciences Care and treatment CD4 antigen Cell culture Clinical outcomes Cohort analysis Cohort Studies Diagnosis Diagnostic systems Drug resistance Drug Resistance, Bacterial Epidemiology Female Health economics Health sciences HIV Hospitals Human immunodeficiency virus Humans Internal medicine Lentivirus Male Medical diagnosis Medical research Medicine Medicine and Health Sciences Middle Aged Mycobacterium Observational studies Outcome Assessment (Health Care) Patient outcomes Patients Public sector Retroviridae Rifampin Rifampin - pharmacology South Africa Sputum Systematic review Time Factors Treatment Outcome Tuberculosis Tuberculosis, Pulmonary - drug therapy |
title | Early Outcomes Of Decentralized Care for Rifampicin-Resistant Tuberculosis in Johannesburg, South Africa: An Observational Cohort Study |
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