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Reprimo tissue-specific expression pattern is conserved between zebrafish and human
Reprimo (RPRM), a member of the RPRM gene family, is a tumor-suppressor gene involved in the regulation of the p53-mediated cell cycle arrest at G2/M. RPRM has been associated with malignant tumor progression and proposed as a potential biomarker for early cancer detection. However, the expression a...
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Published in: | PloS one 2017-05, Vol.12 (5), p.e0178274-e0178274 |
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creator | Figueroa, Ricardo J Carrasco-Avino, Gonzalo Wichmann, Ignacio A Lange, Martin Owen, Gareth I Siekmann, Arndt F Corvalán, Alejandro H Opazo, Juan C Amigo, Julio D |
description | Reprimo (RPRM), a member of the RPRM gene family, is a tumor-suppressor gene involved in the regulation of the p53-mediated cell cycle arrest at G2/M. RPRM has been associated with malignant tumor progression and proposed as a potential biomarker for early cancer detection. However, the expression and role of RPRM, as well as its family, are poorly understood and their physiology is as yet unstudied. In this scenario, a model system like the zebrafish could serve to dissect the role of the RPRM family members in vivo. Phylogenetic analysis reveals that RPRM and RPRML have been differentially retained by most species throughout vertebrate evolution, yet RPRM3 has been retained only in a small group of distantly related species, including zebrafish. Herein, we characterized the spatiotemporal expression of RPRM (present in zebrafish as an infraclass duplication rprma/rprmb), RPRML and RPRM3 in the zebrafish. By whole-mount in situ hybridization (WISH) and fluorescent in situ hybridization (FISH), we demonstrate that rprm (rprma/rprmb) and rprml show a similar spatiotemporal expression profile during zebrafish development. At early developmental stages rprmb is expressed in somites. After one day post-fertilization, rprm (rprma/rprmb) and rprml are expressed in the notochord, brain, blood vessels and digestive tube. On the other hand, rprm3 shows the most unique expression profile, being expressed only in the central nervous system (CNS). We assessed the expression patterns of RPRM gene transcripts in adult zebrafish and human RPRM protein product in tissue samples by RT-qPCR and immunohistochemistry (IHC) staining, respectively. Strikingly, tissue-specific expression patterns of the RPRM transcripts and protein are conserved between zebrafish and humans. We propose the zebrafish as a powerful tool to elucidate the both physiological and pathological roles of the RPRM gene family. |
doi_str_mv | 10.1371/journal.pone.0178274 |
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RPRM has been associated with malignant tumor progression and proposed as a potential biomarker for early cancer detection. However, the expression and role of RPRM, as well as its family, are poorly understood and their physiology is as yet unstudied. In this scenario, a model system like the zebrafish could serve to dissect the role of the RPRM family members in vivo. Phylogenetic analysis reveals that RPRM and RPRML have been differentially retained by most species throughout vertebrate evolution, yet RPRM3 has been retained only in a small group of distantly related species, including zebrafish. Herein, we characterized the spatiotemporal expression of RPRM (present in zebrafish as an infraclass duplication rprma/rprmb), RPRML and RPRM3 in the zebrafish. By whole-mount in situ hybridization (WISH) and fluorescent in situ hybridization (FISH), we demonstrate that rprm (rprma/rprmb) and rprml show a similar spatiotemporal expression profile during zebrafish development. At early developmental stages rprmb is expressed in somites. After one day post-fertilization, rprm (rprma/rprmb) and rprml are expressed in the notochord, brain, blood vessels and digestive tube. On the other hand, rprm3 shows the most unique expression profile, being expressed only in the central nervous system (CNS). We assessed the expression patterns of RPRM gene transcripts in adult zebrafish and human RPRM protein product in tissue samples by RT-qPCR and immunohistochemistry (IHC) staining, respectively. Strikingly, tissue-specific expression patterns of the RPRM transcripts and protein are conserved between zebrafish and humans. We propose the zebrafish as a powerful tool to elucidate the both physiological and pathological roles of the RPRM gene family.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0178274</identifier><identifier>PMID: 28562620</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Amino Acid Sequence ; Animals ; Biological evolution ; Biological markers ; Biology and Life Sciences ; Blood ; Blood vessels ; Brain ; Cancer ; Cell cycle ; Cell Cycle Proteins - genetics ; Central nervous system ; Chronic illnesses ; Conserved Sequence ; Cytogenetics ; Developmental stages ; Evolution ; Fertilization ; Fluorescence ; Gene expression ; Gene Expression Regulation ; Gene Expression Regulation, Developmental ; Genes ; Genetic aspects ; Genetics ; Genomes ; Genomics ; Glycoproteins - genetics ; Humans ; Hybridization ; Immunohistochemistry ; Immunology ; In Situ Hybridization ; In Situ Hybridization, Fluorescence ; Medicine and Health Sciences ; Molecular biology ; Nervous system ; Notochord ; p53 Protein ; Phylogeny ; Physiology ; Proteins ; Research and Analysis Methods ; Sequence Homology, Amino Acid ; Somites ; Staining ; Tumor proteins ; Tumors ; Vertebrates ; Zebrafish ; Zebrafish - embryology</subject><ispartof>PloS one, 2017-05, Vol.12 (5), p.e0178274-e0178274</ispartof><rights>COPYRIGHT 2017 Public Library of Science</rights><rights>2017 Figueroa et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2017 Figueroa et al 2017 Figueroa et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c692t-95a46ee738b16e513274376d6112f18efdfb0131e81b59f70867bd3253dae9d3</citedby><cites>FETCH-LOGICAL-c692t-95a46ee738b16e513274376d6112f18efdfb0131e81b59f70867bd3253dae9d3</cites><orcidid>0000-0001-8718-2676</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1904765344/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1904765344?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28562620$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Robinson-Rechavi, Marc</contributor><creatorcontrib>Figueroa, Ricardo J</creatorcontrib><creatorcontrib>Carrasco-Avino, Gonzalo</creatorcontrib><creatorcontrib>Wichmann, Ignacio A</creatorcontrib><creatorcontrib>Lange, Martin</creatorcontrib><creatorcontrib>Owen, Gareth I</creatorcontrib><creatorcontrib>Siekmann, Arndt F</creatorcontrib><creatorcontrib>Corvalán, Alejandro H</creatorcontrib><creatorcontrib>Opazo, Juan C</creatorcontrib><creatorcontrib>Amigo, Julio D</creatorcontrib><title>Reprimo tissue-specific expression pattern is conserved between zebrafish and human</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Reprimo (RPRM), a member of the RPRM gene family, is a tumor-suppressor gene involved in the regulation of the p53-mediated cell cycle arrest at G2/M. RPRM has been associated with malignant tumor progression and proposed as a potential biomarker for early cancer detection. However, the expression and role of RPRM, as well as its family, are poorly understood and their physiology is as yet unstudied. In this scenario, a model system like the zebrafish could serve to dissect the role of the RPRM family members in vivo. Phylogenetic analysis reveals that RPRM and RPRML have been differentially retained by most species throughout vertebrate evolution, yet RPRM3 has been retained only in a small group of distantly related species, including zebrafish. Herein, we characterized the spatiotemporal expression of RPRM (present in zebrafish as an infraclass duplication rprma/rprmb), RPRML and RPRM3 in the zebrafish. By whole-mount in situ hybridization (WISH) and fluorescent in situ hybridization (FISH), we demonstrate that rprm (rprma/rprmb) and rprml show a similar spatiotemporal expression profile during zebrafish development. At early developmental stages rprmb is expressed in somites. After one day post-fertilization, rprm (rprma/rprmb) and rprml are expressed in the notochord, brain, blood vessels and digestive tube. On the other hand, rprm3 shows the most unique expression profile, being expressed only in the central nervous system (CNS). We assessed the expression patterns of RPRM gene transcripts in adult zebrafish and human RPRM protein product in tissue samples by RT-qPCR and immunohistochemistry (IHC) staining, respectively. Strikingly, tissue-specific expression patterns of the RPRM transcripts and protein are conserved between zebrafish and humans. We propose the zebrafish as a powerful tool to elucidate the both physiological and pathological roles of the RPRM gene family.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Biological evolution</subject><subject>Biological markers</subject><subject>Biology and Life Sciences</subject><subject>Blood</subject><subject>Blood vessels</subject><subject>Brain</subject><subject>Cancer</subject><subject>Cell cycle</subject><subject>Cell Cycle Proteins - genetics</subject><subject>Central nervous system</subject><subject>Chronic illnesses</subject><subject>Conserved Sequence</subject><subject>Cytogenetics</subject><subject>Developmental stages</subject><subject>Evolution</subject><subject>Fertilization</subject><subject>Fluorescence</subject><subject>Gene expression</subject><subject>Gene Expression Regulation</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetics</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Glycoproteins - genetics</subject><subject>Humans</subject><subject>Hybridization</subject><subject>Immunohistochemistry</subject><subject>Immunology</subject><subject>In Situ Hybridization</subject><subject>In Situ Hybridization, Fluorescence</subject><subject>Medicine and Health Sciences</subject><subject>Molecular biology</subject><subject>Nervous system</subject><subject>Notochord</subject><subject>p53 Protein</subject><subject>Phylogeny</subject><subject>Physiology</subject><subject>Proteins</subject><subject>Research and Analysis Methods</subject><subject>Sequence Homology, Amino Acid</subject><subject>Somites</subject><subject>Staining</subject><subject>Tumor proteins</subject><subject>Tumors</subject><subject>Vertebrates</subject><subject>Zebrafish</subject><subject>Zebrafish - embryology</subject><issn>1932-6203</issn><issn>1932-6203</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqNkl1rFDEUhgdRbK3-A9EBQfRi13xMkpmbQil-LBQKbfE2ZJIzu1lmkzXJ1OqvN-tOy470QnKRkDznPTnnvEXxGqM5pgJ_WvshONXPt97BHGFRE1E9KY5xQ8mME0SfHpyPihcxrhFitOb8eXFEasZJfjgurq9gG-zGl8nGOMAsbkHbzuoS7rYBYrTelVuVEgRX2lhq7yKEWzBlC-kngCt_QxtUZ-OqVM6Uq2Gj3MviWaf6CK_G_aS4-fL55vzb7OLy6-L87GKmeUPSrGGq4gCC1i3mwDDNBVDBDceYdLiGznQtwhRDjVvWdALVXLSGEkaNgsbQk-LtXnbb-yjHdkSJG1QJzmhVZWKxJ4xXa7mrU4Vf0isr_174sJQqJKt7kI1uAWgtKGKk4jkRIqY2XCNNOWkUyVqnY7ah3YDR4FJQ_UR0-uLsSi79rWQVw4g1WeDDKBD8jwFikhsbNfS9cuCH_b8bnEe7y_XuH_Tx6kZqqXIB1nU-59U7UXlWNVQwgQXN1PwRKi8DG5vHCZ3N95OAj5OAzCS4S0s1xCgX11f_z15-n7LvD9gVqD6tou-HlC0Wp2C1B3XwMQboHpqMkdxZ_74bcmd9OVo_h705HNBD0L3X6R-xgv3v</recordid><startdate>20170531</startdate><enddate>20170531</enddate><creator>Figueroa, Ricardo J</creator><creator>Carrasco-Avino, Gonzalo</creator><creator>Wichmann, Ignacio A</creator><creator>Lange, Martin</creator><creator>Owen, Gareth I</creator><creator>Siekmann, Arndt F</creator><creator>Corvalán, Alejandro H</creator><creator>Opazo, Juan C</creator><creator>Amigo, Julio D</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>IOV</scope><scope>ISR</scope><scope>3V.</scope><scope>7QG</scope><scope>7QL</scope><scope>7QO</scope><scope>7RV</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TG</scope><scope>7TM</scope><scope>7U9</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB.</scope><scope>KB0</scope><scope>KL.</scope><scope>L6V</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>NAPCQ</scope><scope>P5Z</scope><scope>P62</scope><scope>P64</scope><scope>PATMY</scope><scope>PDBOC</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-8718-2676</orcidid></search><sort><creationdate>20170531</creationdate><title>Reprimo tissue-specific expression pattern is conserved between zebrafish and human</title><author>Figueroa, Ricardo J ; Carrasco-Avino, Gonzalo ; Wichmann, Ignacio A ; Lange, Martin ; Owen, Gareth I ; Siekmann, Arndt F ; Corvalán, Alejandro H ; Opazo, Juan C ; Amigo, Julio D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c692t-95a46ee738b16e513274376d6112f18efdfb0131e81b59f70867bd3253dae9d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Biological evolution</topic><topic>Biological markers</topic><topic>Biology and Life Sciences</topic><topic>Blood</topic><topic>Blood vessels</topic><topic>Brain</topic><topic>Cancer</topic><topic>Cell cycle</topic><topic>Cell Cycle Proteins - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Figueroa, Ricardo J</au><au>Carrasco-Avino, Gonzalo</au><au>Wichmann, Ignacio A</au><au>Lange, Martin</au><au>Owen, Gareth I</au><au>Siekmann, Arndt F</au><au>Corvalán, Alejandro H</au><au>Opazo, Juan C</au><au>Amigo, Julio D</au><au>Robinson-Rechavi, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Reprimo tissue-specific expression pattern is conserved between zebrafish and human</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2017-05-31</date><risdate>2017</risdate><volume>12</volume><issue>5</issue><spage>e0178274</spage><epage>e0178274</epage><pages>e0178274-e0178274</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Reprimo (RPRM), a member of the RPRM gene family, is a tumor-suppressor gene involved in the regulation of the p53-mediated cell cycle arrest at G2/M. RPRM has been associated with malignant tumor progression and proposed as a potential biomarker for early cancer detection. However, the expression and role of RPRM, as well as its family, are poorly understood and their physiology is as yet unstudied. In this scenario, a model system like the zebrafish could serve to dissect the role of the RPRM family members in vivo. Phylogenetic analysis reveals that RPRM and RPRML have been differentially retained by most species throughout vertebrate evolution, yet RPRM3 has been retained only in a small group of distantly related species, including zebrafish. Herein, we characterized the spatiotemporal expression of RPRM (present in zebrafish as an infraclass duplication rprma/rprmb), RPRML and RPRM3 in the zebrafish. By whole-mount in situ hybridization (WISH) and fluorescent in situ hybridization (FISH), we demonstrate that rprm (rprma/rprmb) and rprml show a similar spatiotemporal expression profile during zebrafish development. At early developmental stages rprmb is expressed in somites. After one day post-fertilization, rprm (rprma/rprmb) and rprml are expressed in the notochord, brain, blood vessels and digestive tube. On the other hand, rprm3 shows the most unique expression profile, being expressed only in the central nervous system (CNS). We assessed the expression patterns of RPRM gene transcripts in adult zebrafish and human RPRM protein product in tissue samples by RT-qPCR and immunohistochemistry (IHC) staining, respectively. Strikingly, tissue-specific expression patterns of the RPRM transcripts and protein are conserved between zebrafish and humans. We propose the zebrafish as a powerful tool to elucidate the both physiological and pathological roles of the RPRM gene family.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28562620</pmid><doi>10.1371/journal.pone.0178274</doi><tpages>e0178274</tpages><orcidid>https://orcid.org/0000-0001-8718-2676</orcidid><oa>free_for_read</oa></addata></record> |
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identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2017-05, Vol.12 (5), p.e0178274-e0178274 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1904765344 |
source | Publicly Available Content Database; PubMed Central |
subjects | Amino Acid Sequence Animals Biological evolution Biological markers Biology and Life Sciences Blood Blood vessels Brain Cancer Cell cycle Cell Cycle Proteins - genetics Central nervous system Chronic illnesses Conserved Sequence Cytogenetics Developmental stages Evolution Fertilization Fluorescence Gene expression Gene Expression Regulation Gene Expression Regulation, Developmental Genes Genetic aspects Genetics Genomes Genomics Glycoproteins - genetics Humans Hybridization Immunohistochemistry Immunology In Situ Hybridization In Situ Hybridization, Fluorescence Medicine and Health Sciences Molecular biology Nervous system Notochord p53 Protein Phylogeny Physiology Proteins Research and Analysis Methods Sequence Homology, Amino Acid Somites Staining Tumor proteins Tumors Vertebrates Zebrafish Zebrafish - embryology |
title | Reprimo tissue-specific expression pattern is conserved between zebrafish and human |
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