Leptospira diversity in animals and humans in Tahiti, French Polynesia

• Published in: PLoS neglected tropical diseases 2017-06, Vol.11 (6), p.e0005676-e0005676
• Main Authors: Guernier, Vanina, Richard, Vaea, Nhan, Tuxuan, Rouault, Eline, Tessier, Anita, Musso, Didier
• Format: Article
• Language: English
• Subjects: Analysis; Animals; Bacteria; Biology and Life Sciences; Deoxyribonucleic acid; Detection; Disease Reservoirs - microbiology; DNA; DNA sequencing; DNA, Bacterial - isolation & purification; Dogs; Domestic animals; Dominant species; Endemic species; Epidemiology; Gene sequencing; Genotype; Genotypes; Gram-negative bacteria; Hogs; Humans; Identification; Infections; Leptospira - classification; Leptospira - isolation & purification; Leptospirosis; Leptospirosis - epidemiology; Leptospirosis - transmission; Medicine and Health Sciences; Multilocus Sequence Typing; Nucleotide sequence; Phylogeny; Pigs; Polynesia - epidemiology; Public health; Rats; Research and analysis methods; Rural areas; Sequencing; Swine; Transmission; Tropical diseases; Urine; Zoonoses; Zoonoses - epidemiology; Zoonoses - transmission
• ISSN: 1935-2735; 1935-2727; 1935-2735
• DOI: 10.1371/journal.pntd.0005676

Leptospirosis is a highly endemic bacterial zoonosis in French Polynesia (FP). Nevertheless, data on the epidemiology of leptospirosis in FP are scarce. We conducted molecular studies on Leptospira isolated from humans and the potential main animal reservoirs in order to identify the most likely sources for human infection. Wild rats (n = 113), farm pigs (n = 181) and domestic dogs (n = 4) were screened for Leptospira infection in Tahiti, the most populated island in FP. Positive samples were genotyped and compared to Leptospira isolated from human cases throughout FP (n = 51), using secY, 16S and LipL32 sequencing, and MLST analysis. Leptospira DNA was detected in 20.4% of rats and 26.5% of pigs. We identified two Leptospira species and three sequence types (STs) in animals and humans: Leptospira interrogans ST140 in pigs only and L. interrogans ST17 and Leptospira borgpetersenii ST149 in humans and rats. Overall, L. interrogans was the dominant species and grouped into four clades: one clade including a human case only, two clades including human cases and dogs, and one clade including human cases and rats. All except one pig sample showed a unique L. interrogans (secY) genotype distinct from those isolated from humans, rats and dogs. Moreover, LipL32 sequencing allowed the detection of an additional Leptospira genotype in pigs, clearly distinct from the previous ones. Our data confirm rats as a major potential source for human leptospirosis in FP. By contrast to what was expected, farm pigs did not seem to be a major reservoir for the Leptospira genotypes identified in human patients. Thus, further investigations will be required to determine their significance in leptospirosis transmission in FP.