Structural and mutational analyses of the Leptospira interrogans virulence-related heme oxygenase provide insights into its catalytic mechanism

• Published in: PloS one 2017-08, Vol.12 (8), p.e0182535-e0182535
• Main Authors: Soldano, Anabel, Klinke, Sebastián, Otero, Lisandro H, Rivera, Mario, Catalano-Dupuy, Daniela L, Ceccarelli, Eduardo A
• Format: Article
• Language: English
• Subjects: Bacteria; Bacterial Proteins - chemistry; Bacterial Proteins - genetics; Biliverdin; Biochemistry; Biodegradation; Biology and Life Sciences; Carbon monoxide; Catalysis; Catalytic Domain; Chemical bonds; Colonization; Crystal structure; Crystallography, X-Ray; Cytochrome; Degradation; Enzyme Activation; Enzymes; Ferredoxin; Genetic aspects; Gram-negative bacteria; Heme; Heme Oxygenase (Decyclizing) - chemistry; Heme Oxygenase (Decyclizing) - genetics; Hydrogen; Hydrogen Bonding; Hydroxylation; Iron; Leptospira interrogans - enzymology; Leptospira interrogans - genetics; Leptospira interrogans - pathogenicity; Leptospirosis; Ligands; Medicine and Health Sciences; Mental depression; Models, Molecular; Mutagenesis, Site-Directed - methods; Mutation; NADP; Oxygenase; Pathogenesis; Pathogens; Physical Sciences; Protein Conformation; Protein Stability; Proteins; Reductase; Research and Analysis Methods; Rodents; Virulence; Virulence factors; Virulence Factors - chemistry; Virulence Factors - genetics; Water chemistry; Zoonoses
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0182535

Heme oxygenase from Leptospira interrogans is an important virulence factor. During catalysis, redox equivalents are provided to this enzyme by the plastidic-type ferredoxin-NADP+ reductase also found in L. interrogans. This process may have evolved to aid this bacterial pathogen to obtain heme-iron from their host and enable successful colonization. Herein we report the crystal structure of the heme oxygenase-heme complex at 1.73 Å resolution. The structure reveals several distinctive features related to its function. A hydrogen bonded network of structural water molecules that extends from the catalytic site to the protein surface was cleared observed. A depression on the surface appears to be the H+ network entrance from the aqueous environment to the catalytic site for O2 activation, a key step in the heme oxygenase reaction. We have performed a mutational analysis of the F157, located at the above-mentioned depression. The mutant enzymes were unable to carry out the complete degradation of heme to biliverdin since the reaction was arrested at the verdoheme stage. We also observed that the stability of the oxyferrous complex, the efficiency of heme hydroxylation and the subsequent conversion to verdoheme was adversely affected. These findings underscore a long-range communication between the outer fringes of the hydrogen-bonded network of structural waters and the heme active site during catalysis. Finally, by analyzing the crystal structures of ferredoxin-NADP+ reductase and heme oxygenase, we propose a model for the productive association of these proteins.