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Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure
We investigated the impacts of leachates from a swine carcass burial site and a cow manure heap on the geochemical and microbiological properties of agricultural water samples, including leachate, groundwater from monitoring wells and background wells, and stream water. The leachate from the livesto...
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Published in: | PloS one 2017-08, Vol.12 (8), p.e0182579-e0182579 |
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description | We investigated the impacts of leachates from a swine carcass burial site and a cow manure heap on the geochemical and microbiological properties of agricultural water samples, including leachate, groundwater from monitoring wells and background wells, and stream water. The leachate from the livestock burial site showed extremely high electrical conductivity, turbidity, and major ion concentrations, but low redox potential and dissolved oxygen levels. The groundwater in the monitoring wells adjacent to both sites showed severe contamination from the leachate, as indicated by the increases in EC, turbidity, Cl-, and SO42-. Bacteria from the phylum Firmicutes and Bacteriodetes and Archaea from the phylum Euryarchaeota were the major phyla in both the leachates and manure heap. However, the class- or genus-level components of these phyla differed markedly between the leachate and manure heap samples. The relative abundance of Firmicutes decreased from 35% to 0.3~13.9% in the monitoring wells and background wells at both sites. The Firmicutes in these wells was unlikely to have originated from the transportation of leachate to the surrounding environment because Firmicutes genera differed drastically between the leachate and monitoring wells. Meanwhile, sulfate-reducing bacteria (SRB) from the livestock carcass burial site were detected in the monitoring wells close to the leachate. This was likely because the release of carcass decomposition products, such as organic acids, to adjacent areas improved the suitability of the local environments for SRB, which were not abundant in the leachate. This study highlights the need to better understand microbial community dynamics along groundwater flow paths to evaluate bacterial transport in subsurface environments and provides new insights into the effective management of groundwater quality at both farm and regional scales. |
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The leachate from the livestock burial site showed extremely high electrical conductivity, turbidity, and major ion concentrations, but low redox potential and dissolved oxygen levels. The groundwater in the monitoring wells adjacent to both sites showed severe contamination from the leachate, as indicated by the increases in EC, turbidity, Cl-, and SO42-. Bacteria from the phylum Firmicutes and Bacteriodetes and Archaea from the phylum Euryarchaeota were the major phyla in both the leachates and manure heap. However, the class- or genus-level components of these phyla differed markedly between the leachate and manure heap samples. The relative abundance of Firmicutes decreased from 35% to 0.3~13.9% in the monitoring wells and background wells at both sites. The Firmicutes in these wells was unlikely to have originated from the transportation of leachate to the surrounding environment because Firmicutes genera differed drastically between the leachate and monitoring wells. Meanwhile, sulfate-reducing bacteria (SRB) from the livestock carcass burial site were detected in the monitoring wells close to the leachate. This was likely because the release of carcass decomposition products, such as organic acids, to adjacent areas improved the suitability of the local environments for SRB, which were not abundant in the leachate. This study highlights the need to better understand microbial community dynamics along groundwater flow paths to evaluate bacterial transport in subsurface environments and provides new insights into the effective management of groundwater quality at both farm and regional scales.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0182579</identifier><identifier>PMID: 28771598</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Abundance ; Agricultural land ; Agricultural management ; Analysis ; Animal wastes ; Animals ; Archaea ; Archaea - classification ; Archaea - isolation & purification ; Bacteria ; Bacteria - classification ; Bacteria - isolation & purification ; Bacterial leaching ; Biology and Life Sciences ; Burial ; Cattle ; Cattle manure ; Chemical contaminants ; Chemical oxygen demand ; Chlorides ; Communities ; Community structure ; Contamination ; Decomposition ; Dissolved oxygen ; Earth Sciences ; Electrical conductivity ; Electrical resistivity ; Environmental Monitoring ; Environmental science ; Farming ; Farms ; Feces ; Flow paths ; Foot & mouth disease ; Geochemistry ; Groundwater ; Groundwater - analysis ; Groundwater flow ; Groundwater management ; Groundwater quality ; Hogs ; Leachates ; Livestock ; Manure - analysis ; Manures ; Medicine and Health Sciences ; Methods ; Microbiology ; Microbiomes ; Monitoring ; Mortuary Practice ; Organic acids ; Oxygen ; Pathogens ; Phylogeny ; Physical Sciences ; Redox potential ; Relative abundance ; Soil contamination ; Studies ; Sulfate reduction ; Sulfate-reducing bacteria ; Sulfates ; Swine ; Turbidity ; VOCs ; Volatile organic compounds ; Waste disposal ; Water analysis ; Water flow ; Water Microbiology ; Water Pollutants, Chemical - analysis ; Water quality ; Water resource management ; Water sampling ; Water wells ; Wells</subject><ispartof>PloS one, 2017-08, Vol.12 (8), p.e0182579-e0182579</ispartof><rights>COPYRIGHT 2017 Public Library of Science</rights><rights>2017 Kwon et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2017 Kwon et al 2017 Kwon et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a715t-9b6eb857b4aa124cb91861df992f64ea4c3ca900f2b8cfd4f0763d7ecfd78a733</citedby><cites>FETCH-LOGICAL-a715t-9b6eb857b4aa124cb91861df992f64ea4c3ca900f2b8cfd4f0763d7ecfd78a733</cites><orcidid>0000-0002-0542-3307</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1925854050/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1925854050?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27923,27924,37011,37012,44589,53790,53792,74897</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28771598$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Franzetti, Andrea</contributor><creatorcontrib>Kwon, Man Jae</creatorcontrib><creatorcontrib>Yun, Seong-Taek</creatorcontrib><creatorcontrib>Ham, Baknoon</creatorcontrib><creatorcontrib>Lee, Jeong-Ho</creatorcontrib><creatorcontrib>Oh, Jun-Seop</creatorcontrib><creatorcontrib>Jheong, Weon-Wha</creatorcontrib><title>Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>We investigated the impacts of leachates from a swine carcass burial site and a cow manure heap on the geochemical and microbiological properties of agricultural water samples, including leachate, groundwater from monitoring wells and background wells, and stream water. The leachate from the livestock burial site showed extremely high electrical conductivity, turbidity, and major ion concentrations, but low redox potential and dissolved oxygen levels. The groundwater in the monitoring wells adjacent to both sites showed severe contamination from the leachate, as indicated by the increases in EC, turbidity, Cl-, and SO42-. Bacteria from the phylum Firmicutes and Bacteriodetes and Archaea from the phylum Euryarchaeota were the major phyla in both the leachates and manure heap. However, the class- or genus-level components of these phyla differed markedly between the leachate and manure heap samples. The relative abundance of Firmicutes decreased from 35% to 0.3~13.9% in the monitoring wells and background wells at both sites. The Firmicutes in these wells was unlikely to have originated from the transportation of leachate to the surrounding environment because Firmicutes genera differed drastically between the leachate and monitoring wells. Meanwhile, sulfate-reducing bacteria (SRB) from the livestock carcass burial site were detected in the monitoring wells close to the leachate. This was likely because the release of carcass decomposition products, such as organic acids, to adjacent areas improved the suitability of the local environments for SRB, which were not abundant in the leachate. This study highlights the need to better understand microbial community dynamics along groundwater flow paths to evaluate bacterial transport in subsurface environments and provides new insights into the effective management of groundwater quality at both farm and regional scales.</description><subject>Abundance</subject><subject>Agricultural land</subject><subject>Agricultural management</subject><subject>Analysis</subject><subject>Animal wastes</subject><subject>Animals</subject><subject>Archaea</subject><subject>Archaea - classification</subject><subject>Archaea - isolation & purification</subject><subject>Bacteria</subject><subject>Bacteria - classification</subject><subject>Bacteria - isolation & purification</subject><subject>Bacterial leaching</subject><subject>Biology and Life Sciences</subject><subject>Burial</subject><subject>Cattle</subject><subject>Cattle manure</subject><subject>Chemical contaminants</subject><subject>Chemical oxygen demand</subject><subject>Chlorides</subject><subject>Communities</subject><subject>Community structure</subject><subject>Contamination</subject><subject>Decomposition</subject><subject>Dissolved oxygen</subject><subject>Earth Sciences</subject><subject>Electrical conductivity</subject><subject>Electrical resistivity</subject><subject>Environmental Monitoring</subject><subject>Environmental science</subject><subject>Farming</subject><subject>Farms</subject><subject>Feces</subject><subject>Flow paths</subject><subject>Foot & mouth disease</subject><subject>Geochemistry</subject><subject>Groundwater</subject><subject>Groundwater - analysis</subject><subject>Groundwater flow</subject><subject>Groundwater management</subject><subject>Groundwater quality</subject><subject>Hogs</subject><subject>Leachates</subject><subject>Livestock</subject><subject>Manure - analysis</subject><subject>Manures</subject><subject>Medicine and Health Sciences</subject><subject>Methods</subject><subject>Microbiology</subject><subject>Microbiomes</subject><subject>Monitoring</subject><subject>Mortuary Practice</subject><subject>Organic acids</subject><subject>Oxygen</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Physical Sciences</subject><subject>Redox potential</subject><subject>Relative abundance</subject><subject>Soil contamination</subject><subject>Studies</subject><subject>Sulfate reduction</subject><subject>Sulfate-reducing bacteria</subject><subject>Sulfates</subject><subject>Swine</subject><subject>Turbidity</subject><subject>VOCs</subject><subject>Volatile organic compounds</subject><subject>Waste disposal</subject><subject>Water analysis</subject><subject>Water flow</subject><subject>Water Microbiology</subject><subject>Water Pollutants, Chemical - 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classification</topic><topic>Archaea - isolation & purification</topic><topic>Bacteria</topic><topic>Bacteria - classification</topic><topic>Bacteria - isolation & purification</topic><topic>Bacterial leaching</topic><topic>Biology and Life Sciences</topic><topic>Burial</topic><topic>Cattle</topic><topic>Cattle manure</topic><topic>Chemical contaminants</topic><topic>Chemical oxygen demand</topic><topic>Chlorides</topic><topic>Communities</topic><topic>Community structure</topic><topic>Contamination</topic><topic>Decomposition</topic><topic>Dissolved oxygen</topic><topic>Earth Sciences</topic><topic>Electrical conductivity</topic><topic>Electrical resistivity</topic><topic>Environmental Monitoring</topic><topic>Environmental science</topic><topic>Farming</topic><topic>Farms</topic><topic>Feces</topic><topic>Flow paths</topic><topic>Foot & mouth disease</topic><topic>Geochemistry</topic><topic>Groundwater</topic><topic>Groundwater - analysis</topic><topic>Groundwater flow</topic><topic>Groundwater management</topic><topic>Groundwater quality</topic><topic>Hogs</topic><topic>Leachates</topic><topic>Livestock</topic><topic>Manure - 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kwon, Man Jae</au><au>Yun, Seong-Taek</au><au>Ham, Baknoon</au><au>Lee, Jeong-Ho</au><au>Oh, Jun-Seop</au><au>Jheong, Weon-Wha</au><au>Franzetti, Andrea</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2017-08-03</date><risdate>2017</risdate><volume>12</volume><issue>8</issue><spage>e0182579</spage><epage>e0182579</epage><pages>e0182579-e0182579</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>We investigated the impacts of leachates from a swine carcass burial site and a cow manure heap on the geochemical and microbiological properties of agricultural water samples, including leachate, groundwater from monitoring wells and background wells, and stream water. The leachate from the livestock burial site showed extremely high electrical conductivity, turbidity, and major ion concentrations, but low redox potential and dissolved oxygen levels. The groundwater in the monitoring wells adjacent to both sites showed severe contamination from the leachate, as indicated by the increases in EC, turbidity, Cl-, and SO42-. Bacteria from the phylum Firmicutes and Bacteriodetes and Archaea from the phylum Euryarchaeota were the major phyla in both the leachates and manure heap. However, the class- or genus-level components of these phyla differed markedly between the leachate and manure heap samples. The relative abundance of Firmicutes decreased from 35% to 0.3~13.9% in the monitoring wells and background wells at both sites. The Firmicutes in these wells was unlikely to have originated from the transportation of leachate to the surrounding environment because Firmicutes genera differed drastically between the leachate and monitoring wells. Meanwhile, sulfate-reducing bacteria (SRB) from the livestock carcass burial site were detected in the monitoring wells close to the leachate. This was likely because the release of carcass decomposition products, such as organic acids, to adjacent areas improved the suitability of the local environments for SRB, which were not abundant in the leachate. This study highlights the need to better understand microbial community dynamics along groundwater flow paths to evaluate bacterial transport in subsurface environments and provides new insights into the effective management of groundwater quality at both farm and regional scales.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>28771598</pmid><doi>10.1371/journal.pone.0182579</doi><tpages>e0182579</tpages><orcidid>https://orcid.org/0000-0002-0542-3307</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1932-6203 |
ispartof | PloS one, 2017-08, Vol.12 (8), p.e0182579-e0182579 |
issn | 1932-6203 1932-6203 |
language | eng |
recordid | cdi_plos_journals_1925854050 |
source | Open Access: PubMed Central; Publicly Available Content Database (Proquest) (PQ_SDU_P3) |
subjects | Abundance Agricultural land Agricultural management Analysis Animal wastes Animals Archaea Archaea - classification Archaea - isolation & purification Bacteria Bacteria - classification Bacteria - isolation & purification Bacterial leaching Biology and Life Sciences Burial Cattle Cattle manure Chemical contaminants Chemical oxygen demand Chlorides Communities Community structure Contamination Decomposition Dissolved oxygen Earth Sciences Electrical conductivity Electrical resistivity Environmental Monitoring Environmental science Farming Farms Feces Flow paths Foot & mouth disease Geochemistry Groundwater Groundwater - analysis Groundwater flow Groundwater management Groundwater quality Hogs Leachates Livestock Manure - analysis Manures Medicine and Health Sciences Methods Microbiology Microbiomes Monitoring Mortuary Practice Organic acids Oxygen Pathogens Phylogeny Physical Sciences Redox potential Relative abundance Soil contamination Studies Sulfate reduction Sulfate-reducing bacteria Sulfates Swine Turbidity VOCs Volatile organic compounds Waste disposal Water analysis Water flow Water Microbiology Water Pollutants, Chemical - analysis Water quality Water resource management Water sampling Water wells Wells |
title | Impacts of leachates from livestock carcass burial and manure heap sites on groundwater geochemistry and microbial community structure |
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