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De novo assembly of a transcriptome for the cricket Gryllus bimaculatus prothoracic ganglion: An invertebrate model for investigating adult central nervous system compensatory plasticity
The auditory system of the cricket, Gryllus bimaculatus, demonstrates an unusual amount of anatomical plasticity in response to injury, even in adults. Unilateral removal of the ear causes deafferented auditory neurons in the prothoracic ganglion to sprout dendrites across the midline, a boundary th...
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Published in: | PloS one 2018-07, Vol.13 (7), p.e0199070-e0199070 |
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description | The auditory system of the cricket, Gryllus bimaculatus, demonstrates an unusual amount of anatomical plasticity in response to injury, even in adults. Unilateral removal of the ear causes deafferented auditory neurons in the prothoracic ganglion to sprout dendrites across the midline, a boundary they typically respect, and become synaptically connected to the auditory afferents of the contralateral ear. The molecular basis of this sprouting and novel synaptogenesis in the adult is not understood. We hypothesize that well-conserved developmental guidance cues may recapitulate their guidance functions in the adult in order to facilitate this compensatory growth. As a first step in testing this hypothesis, we have generated a de novo assembly of a prothoracic ganglion transcriptome derived from control and deafferented adult individuals. We have mined this transcriptome for orthologues of guidance molecules from four well-conserved signaling families: Slit, Netrin, Ephrin, and Semaphorin. Here we report that transcripts encoding putative orthologues of most of the candidate developmental ligands and receptors from these signaling families were present in the assembly, indicating expression in the adult G. bimaculatus prothoracic ganglion. |
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Unilateral removal of the ear causes deafferented auditory neurons in the prothoracic ganglion to sprout dendrites across the midline, a boundary they typically respect, and become synaptically connected to the auditory afferents of the contralateral ear. The molecular basis of this sprouting and novel synaptogenesis in the adult is not understood. We hypothesize that well-conserved developmental guidance cues may recapitulate their guidance functions in the adult in order to facilitate this compensatory growth. As a first step in testing this hypothesis, we have generated a de novo assembly of a prothoracic ganglion transcriptome derived from control and deafferented adult individuals. We have mined this transcriptome for orthologues of guidance molecules from four well-conserved signaling families: Slit, Netrin, Ephrin, and Semaphorin. Here we report that transcripts encoding putative orthologues of most of the candidate developmental ligands and receptors from these signaling families were present in the assembly, indicating expression in the adult G. bimaculatus prothoracic ganglion.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0199070</identifier><identifier>PMID: 29995882</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Adults ; Assembly ; Auditory plasticity ; Auditory system ; Biology ; Biology and Life Sciences ; Central nervous system ; Crickets ; Dendrites ; Drosophila ; Ear ; Earth science ; Gene expression ; Genomes ; Gryllus bimaculatus ; Insects ; Kinases ; Laboratories ; Medicine and Health Sciences ; Molecular chains ; Nervous system ; Neurobiology ; Neurons ; Neurosciences ; Orthoptera ; Physiological aspects ; Plastic properties ; Plasticity ; Proteins ; Receptors ; Research and Analysis Methods ; Sensory neurons ; Signaling ; Slit protein ; Synaptogenesis ; Transcription factors ; Tribolium</subject><ispartof>PloS one, 2018-07, Vol.13 (7), p.e0199070-e0199070</ispartof><rights>COPYRIGHT 2018 Public Library of Science</rights><rights>2018 Fisher et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. 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Unilateral removal of the ear causes deafferented auditory neurons in the prothoracic ganglion to sprout dendrites across the midline, a boundary they typically respect, and become synaptically connected to the auditory afferents of the contralateral ear. The molecular basis of this sprouting and novel synaptogenesis in the adult is not understood. We hypothesize that well-conserved developmental guidance cues may recapitulate their guidance functions in the adult in order to facilitate this compensatory growth. As a first step in testing this hypothesis, we have generated a de novo assembly of a prothoracic ganglion transcriptome derived from control and deafferented adult individuals. We have mined this transcriptome for orthologues of guidance molecules from four well-conserved signaling families: Slit, Netrin, Ephrin, and Semaphorin. Here we report that transcripts encoding putative orthologues of most of the candidate developmental ligands and receptors from these signaling families were present in the assembly, indicating expression in the adult G. bimaculatus prothoracic ganglion.</description><subject>Adults</subject><subject>Assembly</subject><subject>Auditory plasticity</subject><subject>Auditory system</subject><subject>Biology</subject><subject>Biology and Life Sciences</subject><subject>Central nervous system</subject><subject>Crickets</subject><subject>Dendrites</subject><subject>Drosophila</subject><subject>Ear</subject><subject>Earth science</subject><subject>Gene expression</subject><subject>Genomes</subject><subject>Gryllus bimaculatus</subject><subject>Insects</subject><subject>Kinases</subject><subject>Laboratories</subject><subject>Medicine and Health Sciences</subject><subject>Molecular chains</subject><subject>Nervous 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A</au><au>Joncas, Colby T</au><au>Quenzer, Eleanor D</au><au>Christie, Andrew E</au><au>Horch, Hadley W</au><au>Allodi, Silvana</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>De novo assembly of a transcriptome for the cricket Gryllus bimaculatus prothoracic ganglion: An invertebrate model for investigating adult central nervous system compensatory plasticity</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2018-07-11</date><risdate>2018</risdate><volume>13</volume><issue>7</issue><spage>e0199070</spage><epage>e0199070</epage><pages>e0199070-e0199070</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The auditory system of the cricket, Gryllus bimaculatus, demonstrates an unusual amount of anatomical plasticity in response to injury, even in adults. Unilateral removal of the ear causes deafferented auditory neurons in the prothoracic ganglion to sprout dendrites across the midline, a boundary they typically respect, and become synaptically connected to the auditory afferents of the contralateral ear. The molecular basis of this sprouting and novel synaptogenesis in the adult is not understood. We hypothesize that well-conserved developmental guidance cues may recapitulate their guidance functions in the adult in order to facilitate this compensatory growth. As a first step in testing this hypothesis, we have generated a de novo assembly of a prothoracic ganglion transcriptome derived from control and deafferented adult individuals. We have mined this transcriptome for orthologues of guidance molecules from four well-conserved signaling families: Slit, Netrin, Ephrin, and Semaphorin. Here we report that transcripts encoding putative orthologues of most of the candidate developmental ligands and receptors from these signaling families were present in the assembly, indicating expression in the adult G. bimaculatus prothoracic ganglion.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>29995882</pmid><doi>10.1371/journal.pone.0199070</doi><tpages>e0199070</tpages><orcidid>https://orcid.org/0000-0001-6867-6865</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adults Assembly Auditory plasticity Auditory system Biology Biology and Life Sciences Central nervous system Crickets Dendrites Drosophila Ear Earth science Gene expression Genomes Gryllus bimaculatus Insects Kinases Laboratories Medicine and Health Sciences Molecular chains Nervous system Neurobiology Neurons Neurosciences Orthoptera Physiological aspects Plastic properties Plasticity Proteins Receptors Research and Analysis Methods Sensory neurons Signaling Slit protein Synaptogenesis Transcription factors Tribolium |
title | De novo assembly of a transcriptome for the cricket Gryllus bimaculatus prothoracic ganglion: An invertebrate model for investigating adult central nervous system compensatory plasticity |
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