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Analysis of peritumoral hyperintensity on pre-operative T2-weighted MR images in glioblastoma: Additive prognostic value of Minkowski functionals

The extent of peritumoral tumor cell infiltrations in glioblastoma contributes to poor prognosis. We aimed to assess additive prognostic value of Minkowski functionals in analyzing heterogeneity of peritumoral hyperintensity on T2WI in glioblastoma patients. Clinical data (age, sex, extent of surgic...

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Published in:PloS one 2019-05, Vol.14 (5), p.e0217785-e0217785
Main Authors: Choi, Yangsean, Ahn, Kook Jin, Nam, Yoonho, Jang, Jinhee, Shin, Na-Young, Choi, Hyun Seok, Jung, So-Lyung, Kim, Bum-Soo
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creator Choi, Yangsean
Ahn, Kook Jin
Nam, Yoonho
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Jung, So-Lyung
Kim, Bum-Soo
description The extent of peritumoral tumor cell infiltrations in glioblastoma contributes to poor prognosis. We aimed to assess additive prognostic value of Minkowski functionals in analyzing heterogeneity of peritumoral hyperintensity on T2WI in glioblastoma patients. Clinical data (age, sex, extent of surgical resection), O6-methylguanine-DNA methyltransferase (MGMT) promoter methylation status and pre-operative T2WI of 113 pathologically confirmed glioblastoma patients (from our institution, n = 61; from the Cancer Imaging Archive, n = 52) were retrospectively reviewed. The patients were randomly grouped into a training set (n = 80) and a test set (n = 33). Peritumoral T2 hyperintensity was manually segmented and Minkowski functionals-a texture analysis method capturing heterogeneity of MR images-were computed as a function of 11 grayscale thresholds. The Cox proportional hazards models were fitted with clinical variables, Minkowski functionals features as well as both combined. The risk prediction performances of the Minkowski functionals and combined models were validated on a separate test dataset. The sex-specific survival difference of the entire cohort was analyzed according to MGMT methylation status via Kaplan-Meier survival curves. Thirty-three Minkowski features (11 area, 11 perimeter and 11 genus) for each patient were acquired giving a total of 3729 features. Cox regression models fitted with clinical data, Minkowski features, and both combined had incremental concordance indices of 0.577 (P = 0.02), 0.706 (P = 0.02) and 0.714 (P = 0.01) respectively. The prediction error rate of the combined model-having clinical and Minkowski features-was lower than that of Minkowski functionals model (0.135 and 0.161, respectively) when validated on a test dataset. No sex-specific survival difference was found according to MGMT methylation status (male, P = 0.2; female, P = 0.22). Minkowski functionals features computed from peritumoral hyperintensity can capture heterogeneity of glioblastoma on T2WI and have additive prognostic value in predicting survival, demonstrating their potential in complementing currently available prognostic parameters.
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We aimed to assess additive prognostic value of Minkowski functionals in analyzing heterogeneity of peritumoral hyperintensity on T2WI in glioblastoma patients. Clinical data (age, sex, extent of surgical resection), O6-methylguanine-DNA methyltransferase (MGMT) promoter methylation status and pre-operative T2WI of 113 pathologically confirmed glioblastoma patients (from our institution, n = 61; from the Cancer Imaging Archive, n = 52) were retrospectively reviewed. The patients were randomly grouped into a training set (n = 80) and a test set (n = 33). Peritumoral T2 hyperintensity was manually segmented and Minkowski functionals-a texture analysis method capturing heterogeneity of MR images-were computed as a function of 11 grayscale thresholds. The Cox proportional hazards models were fitted with clinical variables, Minkowski functionals features as well as both combined. 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>PloS one</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Choi, Yangsean</au><au>Ahn, Kook Jin</au><au>Nam, Yoonho</au><au>Jang, Jinhee</au><au>Shin, Na-Young</au><au>Choi, Hyun Seok</au><au>Jung, So-Lyung</au><au>Kim, Bum-Soo</au><au>Lin, Pan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Analysis of peritumoral hyperintensity on pre-operative T2-weighted MR images in glioblastoma: Additive prognostic value of Minkowski functionals</atitle><jtitle>PloS one</jtitle><addtitle>PLoS One</addtitle><date>2019-05-31</date><risdate>2019</risdate><volume>14</volume><issue>5</issue><spage>e0217785</spage><epage>e0217785</epage><pages>e0217785-e0217785</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>The extent of peritumoral tumor cell infiltrations in glioblastoma contributes to poor prognosis. We aimed to assess additive prognostic value of Minkowski functionals in analyzing heterogeneity of peritumoral hyperintensity on T2WI in glioblastoma patients. Clinical data (age, sex, extent of surgical resection), O6-methylguanine-DNA methyltransferase (MGMT) promoter methylation status and pre-operative T2WI of 113 pathologically confirmed glioblastoma patients (from our institution, n = 61; from the Cancer Imaging Archive, n = 52) were retrospectively reviewed. The patients were randomly grouped into a training set (n = 80) and a test set (n = 33). Peritumoral T2 hyperintensity was manually segmented and Minkowski functionals-a texture analysis method capturing heterogeneity of MR images-were computed as a function of 11 grayscale thresholds. The Cox proportional hazards models were fitted with clinical variables, Minkowski functionals features as well as both combined. The risk prediction performances of the Minkowski functionals and combined models were validated on a separate test dataset. The sex-specific survival difference of the entire cohort was analyzed according to MGMT methylation status via Kaplan-Meier survival curves. Thirty-three Minkowski features (11 area, 11 perimeter and 11 genus) for each patient were acquired giving a total of 3729 features. Cox regression models fitted with clinical data, Minkowski features, and both combined had incremental concordance indices of 0.577 (P = 0.02), 0.706 (P = 0.02) and 0.714 (P = 0.01) respectively. The prediction error rate of the combined model-having clinical and Minkowski features-was lower than that of Minkowski functionals model (0.135 and 0.161, respectively) when validated on a test dataset. No sex-specific survival difference was found according to MGMT methylation status (male, P = 0.2; female, P = 0.22). Minkowski functionals features computed from peritumoral hyperintensity can capture heterogeneity of glioblastoma on T2WI and have additive prognostic value in predicting survival, demonstrating their potential in complementing currently available prognostic parameters.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>31150499</pmid><doi>10.1371/journal.pone.0217785</doi><orcidid>https://orcid.org/0000-0001-6081-7360</orcidid><orcidid>https://orcid.org/0000-0003-1674-7101</orcidid><oa>free_for_read</oa></addata></record>
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ispartof PloS one, 2019-05, Vol.14 (5), p.e0217785-e0217785
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subjects Aged
Biomarkers, Tumor - genetics
Biopsy
Brain cancer
Computation
Deoxyribonucleic acid
Disease-Free Survival
DNA
DNA methylation
DNA Methylation - genetics
DNA methyltransferase
DNA Modification Methylases - genetics
DNA Repair Enzymes - genetics
Edema
Female
Glioblastoma
Glioblastoma - diagnostic imaging
Glioblastoma - genetics
Glioblastoma - surgery
Glioblastoma - therapy
Hazards
Heterogeneity
Hospitals
Humans
Kaplan-Meier Estimate
Magnetic Resonance Imaging
Male
Medical imaging
Medical prognosis
Medicine
Medicine and Health Sciences
Methylation
Methylguanine
Middle Aged
Mutation
O6-methylguanine-DNA methyltransferase
Physical Sciences
Predictions
Prognosis
Promoter Regions, Genetic
Proportional Hazards Models
Regression analysis
Regression models
Research and Analysis Methods
Retrospective Studies
Sex
Sex Characteristics
Statistical models
Survival
Survival Analysis
Systematic review
Temozolomide
Tumor Suppressor Proteins - genetics
title Analysis of peritumoral hyperintensity on pre-operative T2-weighted MR images in glioblastoma: Additive prognostic value of Minkowski functionals
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