Impact of COVID-19 epidemic curtailment strategies in selected Indian states: An analysis by reproduction number and doubling time with incidence modelling

• Published in: PloS one 2020-09, Vol.15 (9), p.e0239026-e0239026
• Main Authors: Mitra, Arun, Pakhare, Abhijit P, Roy, Adrija, Joshi, Ankur
• Format: Article
• Language: English
• Subjects: Algorithms; Application programming interface; Basic Reproduction Number; Betacoronavirus - physiology; Biology and Life Sciences; Clinical Laboratory Techniques - statistics & numerical data; Communicable Disease Control - methods; Control; Coronavirus Infections - diagnosis; Coronavirus Infections - epidemiology; Coronavirus Infections - prevention & control; Coronavirus Infections - transmission; Coronaviruses; COVID-19; COVID-19 Testing; Crowdsourcing; Databases, Factual; Disease control; Disease transmission; Epidemics; Evaluation; Geography, Medical; Government Agencies; Growth rate; Health Policy; Humans; Incidence; India; India - epidemiology; Infection control; Maximum likelihood estimates; Medicine; Medicine and Health Sciences; Mitigation; Models, Biological; Outbreaks; Pandemics - prevention & control; Parameter estimation; People and Places; Physical Sciences; Pneumonia, Viral - epidemiology; Pneumonia, Viral - prevention & control; Pneumonia, Viral - transmission; Public domain; Public health; Quarantine; Reproduction; SARS-CoV-2; Trends; Viral diseases
• ISSN: 1932-6203; 1932-6203
• DOI: 10.1371/journal.pone.0239026

The Government of India in-network with the state governments has implemented the epidemic curtailment strategies inclusive of case-isolation, quarantine and lockdown in response to ongoing novel coronavirus (COVID-19) outbreak. In this manuscript, we attempt to estimate the impact of these steps across ten selected Indian states using crowd-sourced data. The trajectory of the outbreak was parameterized by the reproduction number (R0), doubling time, and growth rate. These parameters were estimated at two time-periods after the enforcement of the lockdown on 24th March 2020, i.e. 15 days into lockdown and 30 days into lockdown. The authors used a crowd sourced database which is available in the public domain. After preparing the data for analysis, R0 was estimated using maximum likelihood (ML) method which is based on the expectation minimum algorithm where the distribution probability of secondary cases is maximized using the serial interval discretization. The doubling time and growth rate were estimated by the natural log transformation of the exponential growth equation. The overall analysis shows decreasing trends in time-varying reproduction numbers (R(t)) and growth rate (with a few exceptions) and increasing trends in doubling time. The curtailment strategies employed by the Indian government seem to be effective in reducing the transmission parameters of the COVID-19 epidemic. The estimated R(t) are still above the threshold of 1, and the resultant absolute case numbers show an increase with time. Future curtailment and mitigation strategies thus may take into account these findings while formulating further course of action.