Constructing and validating a transferable epidemic risk index in data scarce environments using open data: A case study for dengue in the Philippines

• Published in: PLoS neglected tropical diseases 2022-02, Vol.16 (2), p.e0009262-e0009262
• Main Authors: Hierink, Fleur, Margutti, Jacopo, van den Homberg, Marc, Ray, Nicolas
• Format: Article
• Language: English
• Subjects: Asymptomatic; Construction; Decision making; Dengue; Dengue - epidemiology; Dengue - mortality; Dengue fever; Dengue Virus; Dimensions; Disease control; Disease outbreaks; Disease prevention; Distribution; Emergency preparedness; Emergency response; Epidemics; Epidemiologic Methods; Epidemiology; Fatalities; Health care facilities; Health facilities; Health risks; Health surveillance; Human diseases; Humanitarianism; Humans; Incidence; Infectious diseases; Medicine and Health Sciences; Methodology; Mosquitoes; Open data; Outbreaks; People and Places; Philippines; Philippines - epidemiology; Population; Public health; Risk assessment; Risk Assessment - methods; Risk factors; Surveillance; Tropical diseases; Vector-borne diseases
• ISSN: 1935-2735; 1935-2727; 1935-2735
• DOI: 10.1371/journal.pntd.0009262

Epidemics are among the most costly and destructive natural hazards globally. To reduce the impacts of infectious disease outbreaks, the development of a risk index for infectious diseases can be effective, by shifting infectious disease control from emergency response to early detection and prevention. In this study, we introduce a methodology to construct and validate an epidemic risk index using only open data, with a specific focus on scalability. The external validation of our risk index makes use of distance sampling to correct for underreporting of infections, which is often a major source of biases, based on geographical accessibility to health facilities. We apply this methodology to assess the risk of dengue in the Philippines. The results show that the computed dengue risk correlates well with standard epidemiological metrics, i.e. dengue incidence (p = 0.002). Here, dengue risk constitutes of the two dimensions susceptibility and exposure. Susceptibility was particularly associated with dengue incidence (p = 0.048) and dengue case fatality rate (CFR) (p = 0.029). Exposure had lower correlations to dengue incidence (p = 0.193) and CFR (p = 0.162). Highest risk indices were seen in the south of the country, mainly among regions with relatively high susceptibility to dengue outbreaks. Our findings reflect that the modelled epidemic risk index is a strong indication of sub-national dengue disease patterns and has therefore proven suitability for disease risk assessments in the absence of timely epidemiological data. The presented methodology enables the construction of a practical, evidence-based tool to support public health and humanitarian decision-making processes with simple, understandable metrics. The index overcomes the main limitations of existing indices in terms of construction and actionability.