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A mathematical model for cancer risk and accumulation of mutations caused by replication errors and external factors
Replication errors influence mutations, and thus, lifetime cancer risk can be explained by the number of stem-cell divisions. Additionally, mutagens also affect cancer risk, for instance, high-dose radiation exposure increases lifetime cancer risk. However, the influence of low-dose radiation exposu...
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Published in: | PloS one 2023-06, Vol.18 (6), p.e0286499-e0286499 |
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description | Replication errors influence mutations, and thus, lifetime cancer risk can be explained by the number of stem-cell divisions. Additionally, mutagens also affect cancer risk, for instance, high-dose radiation exposure increases lifetime cancer risk. However, the influence of low-dose radiation exposure is still unclear because this influence, if any, is very slight. We can assess the minimal influence of the mutagen by virtually comparing the states with and without mutagen using a mathematical model. Here, we constructed a mathematical model to assess the influence of replication errors and mutagens on cancer risk. In our model, replication errors occur with a certain probability during cell division. Mutagens cause mutations at a constant rate. Cell division is arrested when the number of cells reaches the capacity of the cell pool. When the number of cells decreases because of cell death or other reasons, cells resume division. It was assumed that the mutations of cancer driver genes occur stochastically with each mutation and that cancer occurs when the number of cancer driver gene mutations exceeds a certain threshold. We approximated the number of mutations caused by errors and mutagens. Then, we examined whether cancer registry data on cancer risk can be explained only through replication errors. Although the risk of leukemia was not fitted to the model, the risks of esophageal, liver, thyroid, pancreatic, colon, breast, and prostate cancers were explained only by replication errors. Even if the risk was explained by replication errors, the estimated parameters did not always agree with previously reported values. For example, the estimated number of cancer driver genes in lung cancer was larger than the previously reported values. This discrepancy can be partly resolved by assuming the influence of mutagen. First, the influence of mutagens was analyzed using various parameters. The model predicted that the influence of mutagens will appear earlier, when the turnover rate of the tissue is higher and fewer mutations of cancer driver genes were necessary for carcinogenesis. Next, the parameters of lung cancer were re-estimated assuming the influence of mutagens. The estimated parameters were closer to the previously reported values. than when considering only replication errors. Although it may be useful to explain cancer risk by replication errors, it would be biologically more plausible to consider mutagens in cancers in which the effects of mutagens |
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Additionally, mutagens also affect cancer risk, for instance, high-dose radiation exposure increases lifetime cancer risk. However, the influence of low-dose radiation exposure is still unclear because this influence, if any, is very slight. We can assess the minimal influence of the mutagen by virtually comparing the states with and without mutagen using a mathematical model. Here, we constructed a mathematical model to assess the influence of replication errors and mutagens on cancer risk. In our model, replication errors occur with a certain probability during cell division. Mutagens cause mutations at a constant rate. Cell division is arrested when the number of cells reaches the capacity of the cell pool. When the number of cells decreases because of cell death or other reasons, cells resume division. It was assumed that the mutations of cancer driver genes occur stochastically with each mutation and that cancer occurs when the number of cancer driver gene mutations exceeds a certain threshold. We approximated the number of mutations caused by errors and mutagens. Then, we examined whether cancer registry data on cancer risk can be explained only through replication errors. Although the risk of leukemia was not fitted to the model, the risks of esophageal, liver, thyroid, pancreatic, colon, breast, and prostate cancers were explained only by replication errors. Even if the risk was explained by replication errors, the estimated parameters did not always agree with previously reported values. For example, the estimated number of cancer driver genes in lung cancer was larger than the previously reported values. This discrepancy can be partly resolved by assuming the influence of mutagen. First, the influence of mutagens was analyzed using various parameters. The model predicted that the influence of mutagens will appear earlier, when the turnover rate of the tissue is higher and fewer mutations of cancer driver genes were necessary for carcinogenesis. Next, the parameters of lung cancer were re-estimated assuming the influence of mutagens. The estimated parameters were closer to the previously reported values. than when considering only replication errors. Although it may be useful to explain cancer risk by replication errors, it would be biologically more plausible to consider mutagens in cancers in which the effects of mutagens are apparent.</description><identifier>ISSN: 1932-6203</identifier><identifier>EISSN: 1932-6203</identifier><identifier>DOI: 10.1371/journal.pone.0286499</identifier><identifier>PMID: 37315031</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Age ; Auroral kilometric radiation ; Biology and Life Sciences ; Breast cancer ; Cancer ; Carcinogenesis ; Carcinogens ; Care and treatment ; Cell death ; Cell division ; Chronic myeloid leukemia ; Colorectal cancer ; DNA Damage ; Errors ; Gene mutations ; Genes ; Genetic aspects ; Health aspects ; Health risks ; Humans ; Influence ; Leukemia ; Lung cancer ; Lung diseases ; Lung Neoplasms ; Male ; Mathematical models ; Medicine and Health Sciences ; Modelling ; Models, Theoretical ; Mutagens ; Mutation ; Nuclear power plants ; Parameter estimation ; Prevention ; Prostate cancer ; Radiation ; Radiation dosage ; Radiation effects ; Replication ; Risk ; Risk factors ; Stem cells ; Thyroid ; Thyroid cancer ; Turnover rate</subject><ispartof>PloS one, 2023-06, Vol.18 (6), p.e0286499-e0286499</ispartof><rights>Copyright: © 2023 Uchinomiya, Tomita. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2023 Public Library of Science</rights><rights>2023 Uchinomiya, Tomita. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 Uchinomiya, Tomita 2023 Uchinomiya, Tomita</rights><rights>2023 Uchinomiya, Tomita. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c693t-10927108fd70b44cf18924c118de6b91f8f1b573efc73723a30ce9594ef76653</citedby><cites>FETCH-LOGICAL-c693t-10927108fd70b44cf18924c118de6b91f8f1b573efc73723a30ce9594ef76653</cites><orcidid>0000-0002-4176-2349</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2825791905/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2825791905?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37315031$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Woloschak, Gayle E.</contributor><creatorcontrib>Uchinomiya, Kouki</creatorcontrib><creatorcontrib>Tomita, Masanori</creatorcontrib><title>A mathematical model for cancer risk and accumulation of mutations caused by replication errors and external factors</title><title>PloS one</title><addtitle>PLoS One</addtitle><description>Replication errors influence mutations, and thus, lifetime cancer risk can be explained by the number of stem-cell divisions. Additionally, mutagens also affect cancer risk, for instance, high-dose radiation exposure increases lifetime cancer risk. However, the influence of low-dose radiation exposure is still unclear because this influence, if any, is very slight. We can assess the minimal influence of the mutagen by virtually comparing the states with and without mutagen using a mathematical model. Here, we constructed a mathematical model to assess the influence of replication errors and mutagens on cancer risk. In our model, replication errors occur with a certain probability during cell division. Mutagens cause mutations at a constant rate. Cell division is arrested when the number of cells reaches the capacity of the cell pool. When the number of cells decreases because of cell death or other reasons, cells resume division. It was assumed that the mutations of cancer driver genes occur stochastically with each mutation and that cancer occurs when the number of cancer driver gene mutations exceeds a certain threshold. We approximated the number of mutations caused by errors and mutagens. Then, we examined whether cancer registry data on cancer risk can be explained only through replication errors. Although the risk of leukemia was not fitted to the model, the risks of esophageal, liver, thyroid, pancreatic, colon, breast, and prostate cancers were explained only by replication errors. Even if the risk was explained by replication errors, the estimated parameters did not always agree with previously reported values. For example, the estimated number of cancer driver genes in lung cancer was larger than the previously reported values. This discrepancy can be partly resolved by assuming the influence of mutagen. First, the influence of mutagens was analyzed using various parameters. The model predicted that the influence of mutagens will appear earlier, when the turnover rate of the tissue is higher and fewer mutations of cancer driver genes were necessary for carcinogenesis. Next, the parameters of lung cancer were re-estimated assuming the influence of mutagens. The estimated parameters were closer to the previously reported values. than when considering only replication errors. Although it may be useful to explain cancer risk by replication errors, it would be biologically more plausible to consider mutagens in cancers in which the effects of mutagens are apparent.</description><subject>Age</subject><subject>Auroral kilometric radiation</subject><subject>Biology and Life Sciences</subject><subject>Breast cancer</subject><subject>Cancer</subject><subject>Carcinogenesis</subject><subject>Carcinogens</subject><subject>Care and treatment</subject><subject>Cell death</subject><subject>Cell division</subject><subject>Chronic myeloid leukemia</subject><subject>Colorectal cancer</subject><subject>DNA Damage</subject><subject>Errors</subject><subject>Gene mutations</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Health aspects</subject><subject>Health risks</subject><subject>Humans</subject><subject>Influence</subject><subject>Leukemia</subject><subject>Lung cancer</subject><subject>Lung diseases</subject><subject>Lung Neoplasms</subject><subject>Male</subject><subject>Mathematical models</subject><subject>Medicine and Health Sciences</subject><subject>Modelling</subject><subject>Models, Theoretical</subject><subject>Mutagens</subject><subject>Mutation</subject><subject>Nuclear power plants</subject><subject>Parameter estimation</subject><subject>Prevention</subject><subject>Prostate cancer</subject><subject>Radiation</subject><subject>Radiation dosage</subject><subject>Radiation effects</subject><subject>Replication</subject><subject>Risk</subject><subject>Risk factors</subject><subject>Stem cells</subject><subject>Thyroid</subject><subject>Thyroid cancer</subject><subject>Turnover 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One</addtitle><date>2023-06-14</date><risdate>2023</risdate><volume>18</volume><issue>6</issue><spage>e0286499</spage><epage>e0286499</epage><pages>e0286499-e0286499</pages><issn>1932-6203</issn><eissn>1932-6203</eissn><abstract>Replication errors influence mutations, and thus, lifetime cancer risk can be explained by the number of stem-cell divisions. Additionally, mutagens also affect cancer risk, for instance, high-dose radiation exposure increases lifetime cancer risk. However, the influence of low-dose radiation exposure is still unclear because this influence, if any, is very slight. We can assess the minimal influence of the mutagen by virtually comparing the states with and without mutagen using a mathematical model. Here, we constructed a mathematical model to assess the influence of replication errors and mutagens on cancer risk. In our model, replication errors occur with a certain probability during cell division. Mutagens cause mutations at a constant rate. Cell division is arrested when the number of cells reaches the capacity of the cell pool. When the number of cells decreases because of cell death or other reasons, cells resume division. It was assumed that the mutations of cancer driver genes occur stochastically with each mutation and that cancer occurs when the number of cancer driver gene mutations exceeds a certain threshold. We approximated the number of mutations caused by errors and mutagens. Then, we examined whether cancer registry data on cancer risk can be explained only through replication errors. Although the risk of leukemia was not fitted to the model, the risks of esophageal, liver, thyroid, pancreatic, colon, breast, and prostate cancers were explained only by replication errors. Even if the risk was explained by replication errors, the estimated parameters did not always agree with previously reported values. For example, the estimated number of cancer driver genes in lung cancer was larger than the previously reported values. This discrepancy can be partly resolved by assuming the influence of mutagen. First, the influence of mutagens was analyzed using various parameters. The model predicted that the influence of mutagens will appear earlier, when the turnover rate of the tissue is higher and fewer mutations of cancer driver genes were necessary for carcinogenesis. Next, the parameters of lung cancer were re-estimated assuming the influence of mutagens. The estimated parameters were closer to the previously reported values. than when considering only replication errors. Although it may be useful to explain cancer risk by replication errors, it would be biologically more plausible to consider mutagens in cancers in which the effects of mutagens are apparent.</abstract><cop>United States</cop><pub>Public Library of Science</pub><pmid>37315031</pmid><doi>10.1371/journal.pone.0286499</doi><tpages>e0286499</tpages><orcidid>https://orcid.org/0000-0002-4176-2349</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Age Auroral kilometric radiation Biology and Life Sciences Breast cancer Cancer Carcinogenesis Carcinogens Care and treatment Cell death Cell division Chronic myeloid leukemia Colorectal cancer DNA Damage Errors Gene mutations Genes Genetic aspects Health aspects Health risks Humans Influence Leukemia Lung cancer Lung diseases Lung Neoplasms Male Mathematical models Medicine and Health Sciences Modelling Models, Theoretical Mutagens Mutation Nuclear power plants Parameter estimation Prevention Prostate cancer Radiation Radiation dosage Radiation effects Replication Risk Risk factors Stem cells Thyroid Thyroid cancer Turnover rate |
title | A mathematical model for cancer risk and accumulation of mutations caused by replication errors and external factors |
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