PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon

• Published in: PLoS genetics 2023-05, Vol.19 (5), p.e1010706-e1010706
• Main Authors: Woods, Daniel P, Li, Weiya, Sibout, Richard, Shao, Mingqin, Laudencia-Chingcuanco, Debbie, Vogel, John P, Dubcovsky, Jorge, Amasino, Richard M
• Format: Article
• Language: English
• Subjects: 60 APPLIED LIFE SCIENCES; Barley; Biology and Life Sciences; Botanical research; Brachypodium - genetics; Brachypodium - metabolism; Brachypodium distachyon; Chromophores; Circadian rhythm; Circadian rhythms; Epistasis, Genetic; Flowers - metabolism; Gene expression; Gene Expression Profiling; Genes; Genetic aspects; Genetics; Genetics & Heredity; Grasses; Life Sciences; Mutants; Mutation; Photoperiod; Photoperiods; Photoreceptors; Physiological aspects; Phytochrome; Phytochrome - metabolism; Plant Proteins - metabolism; Plants genetics; Plants, Flowering of; Proteins; Research and Analysis Methods; Rice; Signal transduction; Transcription factors; Transcription Factors - metabolism; Wheat
• ISSN: 1553-7404; 1553-7390; 1553-7404
• DOI: 10.1371/journal.pgen.1010706

Daylength sensing in many plants is critical for coordinating the timing of flowering with the appropriate season. Temperate climate-adapted grasses such as Brachypodium distachyon flower during the spring when days are becoming longer. The photoreceptor PHYTOCHROME C is essential for long-day (LD) flowering in B. distachyon. PHYC is required for the LD activation of a suite of genes in the photoperiod pathway including PHOTOPERIOD1 (PPD1) that, in turn, result in the activation of FLOWERING LOCUS T (FT1)/FLORIGEN, which causes flowering. Thus, B. distachyon phyC mutants are extremely delayed in flowering. Here we show that PHYC-mediated activation of PPD1 occurs via EARLY FLOWERING 3 (ELF3), a component of the evening complex in the circadian clock. The extreme delay of flowering of the phyC mutant disappears when combined with an elf3 loss-of-function mutation. Moreover, the dampened PPD1 expression in phyC mutant plants is elevated in phyC/elf3 mutant plants consistent with the rapid flowering of the double mutant. We show that loss of PPD1 function also results in reduced FT1 expression and extremely delayed flowering consistent with results from wheat and barley. Additionally, elf3 mutant plants have elevated expression levels of PPD1, and we show that overexpression of ELF3 results in delayed flowering associated with a reduction of PPD1 and FT1 expression, indicating that ELF3 represses PPD1 transcription consistent with previous studies showing that ELF3 binds to the PPD1 promoter. Indeed, PPD1 is the main target of ELF3-mediated flowering as elf3/ppd1 double mutant plants are delayed flowering. Our results indicate that ELF3 operates downstream from PHYC and acts as a repressor of PPD1 in the photoperiod flowering pathway of B. distachyon.