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Borrelia burgdorferi initiates early transcriptional re-programming in macrophages that supports long-term suppression of inflammation
Borrelia burgdorferi (Bb), the causative agent of Lyme disease, establishes a long-term infection and leads to disease manifestations that are the result of host immune responses to the pathogen. Inflammatory manifestations resolve spontaneously despite continued bacterial presence, suggesting infla...
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Published in: | PLoS pathogens 2023-12, Vol.19 (12), p.e1011886-e1011886 |
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description | Borrelia burgdorferi (Bb), the causative agent of Lyme disease, establishes a long-term infection and leads to disease manifestations that are the result of host immune responses to the pathogen. Inflammatory manifestations resolve spontaneously despite continued bacterial presence, suggesting inflammatory cells become less responsive over time. This is mimicked by in vitro repeated stimulations, resulting in tolerance, a phenotypic subset of innate immune memory. We performed comparative transcriptional analysis of macrophages in acute and memory states and identified sets of Tolerized, Hyper-Induced, Secondary-Induced and Hyper-Suppressed genes resulting from memory induction, revealing previously unexplored networks of genes affected by cellular re-programming. Tolerized gene families included inflammatory mediators and interferon related genes as would be predicted by the attenuation of inflammation over time. To better understand how cells mediate inflammatory hypo-responsiveness, we focused on genes that could mediate maintenance of suppression, such as Hyper-Induced genes which are up-regulated in memory states. These genes were notably enriched in stress pathways regulated by anti-inflammatory modulators. We examined one of the most highly expressed negative regulators of immune pathways during primary stimulation, Aconitate decarboxylase 1 (Acod1), and tested its effects during in vivo infection with Bb. As predicted by our in vitro model, we show its inflammation-suppressive downstream effects are sustained during in vivo long-term infection with Bb, with a specific role in Lyme carditis. |
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Scott</contributor><creatorcontrib>Petnicki-Ocwieja, Tanja ; McCarthy, Julie E ; Powale, Urmila ; Langston, P Kent ; Helble, Jennifer D ; Hu, Linden T ; Samuels, D. Scott</creatorcontrib><description>Borrelia burgdorferi (Bb), the causative agent of Lyme disease, establishes a long-term infection and leads to disease manifestations that are the result of host immune responses to the pathogen. Inflammatory manifestations resolve spontaneously despite continued bacterial presence, suggesting inflammatory cells become less responsive over time. This is mimicked by in vitro repeated stimulations, resulting in tolerance, a phenotypic subset of innate immune memory. We performed comparative transcriptional analysis of macrophages in acute and memory states and identified sets of Tolerized, Hyper-Induced, Secondary-Induced and Hyper-Suppressed genes resulting from memory induction, revealing previously unexplored networks of genes affected by cellular re-programming. Tolerized gene families included inflammatory mediators and interferon related genes as would be predicted by the attenuation of inflammation over time. To better understand how cells mediate inflammatory hypo-responsiveness, we focused on genes that could mediate maintenance of suppression, such as Hyper-Induced genes which are up-regulated in memory states. These genes were notably enriched in stress pathways regulated by anti-inflammatory modulators. We examined one of the most highly expressed negative regulators of immune pathways during primary stimulation, Aconitate decarboxylase 1 (Acod1), and tested its effects during in vivo infection with Bb. As predicted by our in vitro model, we show its inflammation-suppressive downstream effects are sustained during in vivo long-term infection with Bb, with a specific role in Lyme carditis.</description><identifier>ISSN: 1553-7374</identifier><identifier>ISSN: 1553-7366</identifier><identifier>EISSN: 1553-7374</identifier><identifier>DOI: 10.1371/journal.ppat.1011886</identifier><identifier>PMID: 38157387</identifier><language>eng</language><publisher>United States: Public Library of Science</publisher><subject>Aconitate decarboxylase ; Analysis ; Bacteria ; Biological response modifiers ; Biology and Life Sciences ; Bone marrow ; Borrelia burgdorferi ; Carditis ; Care and treatment ; Comparative analysis ; Control ; Diagnosis ; Epigenetics ; Experiments ; Gene expression ; Gene families ; Genes ; Genetic aspects ; Genetic transcription ; Identification and classification ; Immune response ; Immune system ; Immunological memory ; Immunological tolerance ; Infection ; Infections ; Inflammation ; Interferon ; Lyme disease ; Macrophages ; Medical research ; Medicine and Health Sciences ; Medicine, Experimental ; Metabolism ; Modulators ; Pathogens ; TLR2 ; Vector-borne diseases</subject><ispartof>PLoS pathogens, 2023-12, Vol.19 (12), p.e1011886-e1011886</ispartof><rights>Copyright: © 2023 Petnicki-Ocwieja et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</rights><rights>COPYRIGHT 2023 Public Library of Science</rights><rights>2023 Petnicki-Ocwieja et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 Petnicki-Ocwieja et al 2023 Petnicki-Ocwieja et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c611t-bbcbcac1442c2a73c9bc8850d2c8371bf29d2407f6a4204501f7b32a5f2317cb3</cites><orcidid>0000-0003-1659-5558</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/3069181133?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/3069181133?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25733,27903,27904,36991,36992,38495,43874,44569,53769,53771,74158,74872</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38157387$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Samuels, D. Scott</contributor><creatorcontrib>Petnicki-Ocwieja, Tanja</creatorcontrib><creatorcontrib>McCarthy, Julie E</creatorcontrib><creatorcontrib>Powale, Urmila</creatorcontrib><creatorcontrib>Langston, P Kent</creatorcontrib><creatorcontrib>Helble, Jennifer D</creatorcontrib><creatorcontrib>Hu, Linden T</creatorcontrib><title>Borrelia burgdorferi initiates early transcriptional re-programming in macrophages that supports long-term suppression of inflammation</title><title>PLoS pathogens</title><addtitle>PLoS Pathog</addtitle><description>Borrelia burgdorferi (Bb), the causative agent of Lyme disease, establishes a long-term infection and leads to disease manifestations that are the result of host immune responses to the pathogen. Inflammatory manifestations resolve spontaneously despite continued bacterial presence, suggesting inflammatory cells become less responsive over time. This is mimicked by in vitro repeated stimulations, resulting in tolerance, a phenotypic subset of innate immune memory. We performed comparative transcriptional analysis of macrophages in acute and memory states and identified sets of Tolerized, Hyper-Induced, Secondary-Induced and Hyper-Suppressed genes resulting from memory induction, revealing previously unexplored networks of genes affected by cellular re-programming. Tolerized gene families included inflammatory mediators and interferon related genes as would be predicted by the attenuation of inflammation over time. To better understand how cells mediate inflammatory hypo-responsiveness, we focused on genes that could mediate maintenance of suppression, such as Hyper-Induced genes which are up-regulated in memory states. These genes were notably enriched in stress pathways regulated by anti-inflammatory modulators. We examined one of the most highly expressed negative regulators of immune pathways during primary stimulation, Aconitate decarboxylase 1 (Acod1), and tested its effects during in vivo infection with Bb. As predicted by our in vitro model, we show its inflammation-suppressive downstream effects are sustained during in vivo long-term infection with Bb, with a specific role in Lyme carditis.</description><subject>Aconitate decarboxylase</subject><subject>Analysis</subject><subject>Bacteria</subject><subject>Biological response modifiers</subject><subject>Biology and Life Sciences</subject><subject>Bone marrow</subject><subject>Borrelia burgdorferi</subject><subject>Carditis</subject><subject>Care and treatment</subject><subject>Comparative analysis</subject><subject>Control</subject><subject>Diagnosis</subject><subject>Epigenetics</subject><subject>Experiments</subject><subject>Gene expression</subject><subject>Gene families</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic transcription</subject><subject>Identification and classification</subject><subject>Immune response</subject><subject>Immune system</subject><subject>Immunological memory</subject><subject>Immunological tolerance</subject><subject>Infection</subject><subject>Infections</subject><subject>Inflammation</subject><subject>Interferon</subject><subject>Lyme disease</subject><subject>Macrophages</subject><subject>Medical research</subject><subject>Medicine and Health Sciences</subject><subject>Medicine, Experimental</subject><subject>Metabolism</subject><subject>Modulators</subject><subject>Pathogens</subject><subject>TLR2</subject><subject>Vector-borne diseases</subject><issn>1553-7374</issn><issn>1553-7366</issn><issn>1553-7374</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>COVID</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNqVk91u1DAQhSMEoqXwBggicQMXWTy2s3auUKn4WakCiZ9ra-I4WVdJnNoOoi_Ac-PtplUX9QblItH4O2c0J54sew5kBUzA2ws3-xH71TRhXAEBkHL9IDuGsmSFYII_vPN9lD0J4YIQDgzWj7MjJqEUTIrj7M97573pLeb17LvG-dZ4m9vRRovRhNyg76_y6HEM2tspWpd65t4Uk3edx2GwY5fwfEDt3bTFLmniFmMe5mlyPoa8d2NXROOH65I3ISSP3LVJ1fbJAHeeT7NHLfbBPFveJ9nPjx9-nH0uzr9-2pydnhd6DRCLuta1Rg2cU01RMF3VWsqSNFTLlEnd0qqhnIh2jZwSXhJoRc0oli1lIHTNTrKXe9-pd0EtEQbFyLoCCcBYIjZ7onF4oSZvB_RXyqFV1wXnO4U-Wt0bxRvaMt4YRNNwZmhFG1ICb2TNeSkrTF7vlm5zPZhGmzEF2R-YHp6Mdqs690sBEWmeCpLD68XBu8vZhKgGG7TpexyNm4OiFamIZJKtE_rqH_T-8RaqwzRB-gUuNdY7U3UqhARCKC8TtbqHSk9jBqvdaFqb6geCNweCxETzO3Y4h6A237_9B_vlkOV7Nt2uELxpb8MDonZrcDOk2q2BWtYgyV7cDf5WdHPv2V9vYAby</recordid><startdate>20231201</startdate><enddate>20231201</enddate><creator>Petnicki-Ocwieja, Tanja</creator><creator>McCarthy, Julie E</creator><creator>Powale, Urmila</creator><creator>Langston, P Kent</creator><creator>Helble, Jennifer D</creator><creator>Hu, Linden T</creator><general>Public Library of Science</general><general>Public Library of Science (PLoS)</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISN</scope><scope>ISR</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-1659-5558</orcidid></search><sort><creationdate>20231201</creationdate><title>Borrelia burgdorferi initiates early transcriptional re-programming in macrophages that supports long-term suppression of inflammation</title><author>Petnicki-Ocwieja, Tanja ; 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Scott</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Borrelia burgdorferi initiates early transcriptional re-programming in macrophages that supports long-term suppression of inflammation</atitle><jtitle>PLoS pathogens</jtitle><addtitle>PLoS Pathog</addtitle><date>2023-12-01</date><risdate>2023</risdate><volume>19</volume><issue>12</issue><spage>e1011886</spage><epage>e1011886</epage><pages>e1011886-e1011886</pages><issn>1553-7374</issn><issn>1553-7366</issn><eissn>1553-7374</eissn><abstract>Borrelia burgdorferi (Bb), the causative agent of Lyme disease, establishes a long-term infection and leads to disease manifestations that are the result of host immune responses to the pathogen. Inflammatory manifestations resolve spontaneously despite continued bacterial presence, suggesting inflammatory cells become less responsive over time. This is mimicked by in vitro repeated stimulations, resulting in tolerance, a phenotypic subset of innate immune memory. 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subjects | Aconitate decarboxylase Analysis Bacteria Biological response modifiers Biology and Life Sciences Bone marrow Borrelia burgdorferi Carditis Care and treatment Comparative analysis Control Diagnosis Epigenetics Experiments Gene expression Gene families Genes Genetic aspects Genetic transcription Identification and classification Immune response Immune system Immunological memory Immunological tolerance Infection Infections Inflammation Interferon Lyme disease Macrophages Medical research Medicine and Health Sciences Medicine, Experimental Metabolism Modulators Pathogens TLR2 Vector-borne diseases |
title | Borrelia burgdorferi initiates early transcriptional re-programming in macrophages that supports long-term suppression of inflammation |
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